Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for EF1A

Gene Name Gene ID Reads Annotation
EF1A EF1A 2378











Genes with expression patterns similar to EF1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EF1A EF1A 2378 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. MNR2 ENSGALG00000011349 3340 4.112 - - 0.702 - 0.743 0.840 - - 0.944 0.883 homeodomain protein
3. MYT1 ENSGALG00000005932 2017 3.501 - - 0.847 - - 0.824 - - 0.885 0.945 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
4. SIAT8C SIAT8C 178 2.638 - - 0.741 - - - - - 0.927 0.970
5. SCML4 ENSGALG00000015309 499 2.589 - - 0.766 - - - - - 0.917 0.906 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
6. GAP43 ENSGALG00000015089 505 2.574 - - 0.751 - - - - - 0.946 0.877 growth associated protein 43 [Source:NCBI gene;Acc:427955]
7. ISL1 ENSGALG00000014884 7666 2.557 - - 0.819 - - - - - 0.883 0.855 ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
8. SYT4 ENSGALG00000042626 384 2.526 - - 0.822 - - - - - 0.936 0.768 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
9. SLC10A4 ENSGALG00000033908 300 2.503 - - - - - 0.705 - - 0.859 0.939 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
10. STMN2 ENSGALG00000039690 989 2.467 - - 0.755 - - - - - 0.800 0.912 stathmin 2 [Source:NCBI gene;Acc:396095]
11. MNX1 ENSGALG00000041154 244 2.413 - - 0.730 - - - - - 0.855 0.828 motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
12. EFCAB6 ENSGALG00000014188 139 2.407 - - 0.795 - - - - - 0.823 0.789 EF-hand calcium binding domain 6, transcript variant X3
13. NKX-6.2 NKX-6.2 1370 2.353 - - 0.760 - 0.764 - - - 0.829 -
14. ELAVL4 ENSGALG00000010533 4978 2.286 - - - - - 0.712 - - 0.746 0.828 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
15. NFASC ENSGALG00000031776 4264 1.862 - - - - - - - - 0.941 0.921 neurofascin [Source:NCBI gene;Acc:419824]
16. NEFL ENSGALG00000000314 4883 1.841 - - - - - - - - 0.905 0.936 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
17. GRM3 ENSGALG00000006576 474 1.807 - - - - - - - - 0.860 0.947 glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
18. RTN1 ENSGALG00000012006 2438 1.778 - - - - - - - - 0.887 0.891 reticulon 1 [Source:NCBI gene;Acc:378791]
19. ECEL1 ENSGALG00000030420 670 1.769 - - - - - - - - 0.890 0.879 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
20. INA ENSGALG00000028238 208 1.72 - - - - - - - - 0.903 0.817 internexin neuronal intermediate filament protein alpha
21. UTS2D UTS2D 2246 1.698 - - 0.816 - - - - - - 0.882
22. SLC5A7 ENSGALG00000016804 93 1.687 - - - - - - - - 0.933 0.754 solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
23. GPM6A ENSGALG00000043480 2133 1.655 - - - - - - - - 0.828 0.827 glycoprotein M6A [Source:NCBI gene;Acc:422569]
24. FABP7 ENSGALG00000038933 6780 1.639 - - - - - - - - 0.803 0.836 fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
25. SNAP25 ENSGALG00000009003 222 1.638 - - - - - - - - 0.782 0.856 synaptosome associated protein 25 [Source:NCBI gene;Acc:396444]
26. MYH15 ENSGALG00000015358 6304 1.627 0.867 - - - 0.760 - - - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
27. TECRL ENSGALG00000038771 126 1.612 0.847 - - - - 0.765 - - - - trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
28. LRRN2 ENSGALG00000000639 73 1.61 - - - - - - - - 0.903 0.707 leucine rich repeat neuronal 2 [Source:HGNC Symbol;Acc:HGNC:16914]
29. NSG1 ENSGALG00000015010 5829 1.597 - - - - - - - - 0.832 0.765 neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
30. UCH-L1 UCH-L1 12697 1.582 - - - - - - - - 0.871 0.711
31. ASTN1 ENSGALG00000004472 855 1.569 - - - - - - - - 0.775 0.794 astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
32. ADRA2C ENSGALG00000015608 42 1.567 - - - - - 0.765 - 0.802 - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
33. CACNG2 ENSGALG00000031977 196 1.561 - - - - - - - - 0.840 0.721 calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]
34. HMP19 ENSGALG00000028602 1604 1.559 - - - - - 0.737 - - - 0.822 Gallus gallus HMP19 protein (HMP19), mRNA. [Source:RefSeq mRNA;Acc:NM_001326465]
35. SHISA3 ENSGALG00000026042 1108 1.548 - - 0.804 - 0.744 - - - - - shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
36. TBC1D30 ENSGALG00000009859 994 1.544 - - - - - - - - 0.838 0.706 TBC1 domain family member 30 [Source:HGNC Symbol;Acc:HGNC:29164]
37. GDI2 ENSGALG00000008169 67151 1.526 - - - - - - - - 0.819 0.707 GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
38. HPCAL1 ENSGALG00000016443 6633 1.523 - - - - - - - - 0.717 0.806 hippocalcin like 1 [Source:NCBI gene;Acc:396161]
39. MYOZ2 ENSGALG00000011991 714 1.498 0.787 - - - - - - - - 0.711 myozenin 2 [Source:NCBI gene;Acc:422682]
40. CDH12 ENSGALG00000012941 223 1.464 - - - - 0.721 - - - - 0.743 cadherin 12, transcript variant X8
41. NHLH1 ENSGALG00000025817 1617 1.411 - - 0.705 - - - - - - 0.706 nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
42. MYL2 ENSGALG00000004582 2245 0.918 0.918 - - - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
43. ACTC1 ENSGALG00000009844 20914 0.913 0.913 - - - - - - - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
44. MYL3 ENSGALG00000005448 3379 0.912 0.912 - - - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
45. RUSC2 ENSGALG00000002371 272 0.911 - - - - - - - - 0.911 - RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]
46. TNNC1 ENSGALG00000001459 7110 0.908 0.908 - - - - - - - - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
47. RBM24 ENSGALG00000012712 4138 0.899 0.899 - - - - - - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
48. TRIM55 ENSGALG00000041327 1097 0.894 0.894 - - - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
49. TPM4 ENSGALG00000002563 15621 0.894 0.894 - - - - - - - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
50. ACTN2 ENSGALG00000014463 1724 0.893 0.893 - - - - - - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
51. NEFM ENSGALG00000000317 6992 0.892 - - - - - - - - - 0.892 neurofilament medium [Source:NCBI gene;Acc:396206]
52. HSPB7L ENSGALG00000028183 795 0.887 0.887 - - - - - - - - - heat shock protein beta-7-like
53. TDRD12 ENSGALG00000004704 19 0.887 - - - - - 0.887 - - - - tudor domain containing 12, transcript variant X3
54. HMGCS1 ENSGALG00000014862 2846 0.881 - - - - - - - - 0.881 - 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]
55. MYBPC3 ENSGALG00000008148 315 0.879 0.879 - - - - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
56. MYH7B ENSGALG00000030985 199 0.873 0.873 - - - - - - - - - Gallus gallus myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA. [Source:RefSeq mRNA;Acc:NM_204587]
57. CSRP3 ENSGALG00000004044 456 0.872 0.872 - - - - - - - - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
58. HOPX ENSGALG00000011404 10 0.869 - - - - - 0.869 - - - - HOP homeobox [Source:NCBI gene;Acc:395241]
59. STMN4 ENSGALG00000030929 621 0.869 - - - - - - - - - 0.869 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
60. ENSGALG00000016601 ENSGALG00000016601 16 0.867 - - - - - 0.867 - - - -
61. HSPB2 ENSGALG00000040842 197 0.867 0.867 - - - - - - - - - heat shock protein family B (small) member 2 [Source:NCBI gene;Acc:414136]
62. RNGTT ENSGALG00000015787 12 0.867 - - - - - 0.867 - - - - RNA guanylyltransferase and 5'-phosphatase [Source:HGNC Symbol;Acc:HGNC:10073]
63. KCTD18 ENSGALG00000008155 26 0.867 - - - - - 0.867 - - - - potassium channel tetramerization domain containing 18 [Source:HGNC Symbol;Acc:HGNC:26446]
64. ADPRHL1 ENSGALG00000016826 133 0.866 0.866 - - - - - - - - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
65. CLEC18B ENSGALG00000027183 284 0.863 - - - - - - 0.863 - - - C-type lectin domain family 18 member B, transcript variant X2
66. PCDHA11 58 0.853 - - - - - - - - - 0.853 protocadherin alpha 11
67. gga-mir-7474 ENSGALG00000033766 5727 0.852 0.852 - - - - - - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
68. Sep-03 Sep-03 109 0.848 - - - - - - - - - 0.848
69. FABP1 ENSGALG00000015937 12 0.844 - - - - - - - - - 0.844 fatty acid binding protein 1 [Source:NCBI gene;Acc:374015]
70. LASP-2 LASP-2 4415 0.84 0.840 - - - - - - - - -
71. VCAM1 ENSGALG00000005257 102 0.838 0.838 - - - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
72. TNNT2 ENSGALG00000000302 568 0.835 0.835 - - - - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
73. CRHR1 ENSGALG00000000371 94 0.833 - - - - - - - - - 0.833 corticotropin releasing hormone receptor 1 [Source:NCBI gene;Acc:374218]
74. NTM ENSGALG00000001437 584 0.831 - - - - - - - - 0.831 - neurotrimin [Source:NCBI gene;Acc:395450]
75. ELOVL4 ENSGALG00000015876 853 0.823 - - - - - - - - 0.823 - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
76. MAP1B ENSGALG00000014999 6288 0.82 - - - - - - - - - 0.820 microtubule associated protein 1B
77. CHADL ENSGALG00000011970 42 0.819 - - - - - - - 0.819 - - chondroadherin-like [Source:NCBI gene;Acc:417998]
78. CCDC141 ENSGALG00000020788 606 0.817 0.817 - - - - - - - - - coiled-coil domain containing 141, transcript variant X5
79. KLHL31 ENSGALG00000016309 1518 0.817 0.817 - - - - - - - - - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
80. TNNI1 ENSGALG00000000313 4069 0.815 0.815 - - - - - - - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
81. ALCAM ENSGALG00000015348 14283 0.814 - - - - - - - - - 0.814 activated leukocyte cell adhesion molecule [Source:NCBI gene;Acc:396092]
82. GABRA3 ENSGALG00000007269 985 0.814 - - - - - - - - 0.814 - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
83. TUBB2B ENSGALG00000012821 41535 0.814 - - - - - - - - 0.814 - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
84. OPRL1 ENSGALG00000027965 53 0.813 - - - - - - - - 0.813 - Gallus gallus opioid related nociceptin receptor 1 (OPRL1), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318978]
85. GKN2 ENSGALG00000039187 173 0.811 0.811 - - - - - - - - - gastrokine 2 [Source:HGNC Symbol;Acc:HGNC:24588]
86. PLPPR1 ENSGALG00000015542 3179 0.81 - - - - - - - - - 0.810 phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
87. FAM134B 807 0.81 - - - - - - - - 0.810 - family with sequence similarity 134 member B, transcript variant X3
88. SIAH3 ENSGALG00000026849 384 0.808 - - - - - - - - - 0.808 siah E3 ubiquitin protein ligase family member 3 [Source:HGNC Symbol;Acc:HGNC:30553]
89. STMN3 ENSGALG00000006130 151 0.806 - - - - - - - - 0.806 - stathmin 3 [Source:NCBI gene;Acc:419263]
90. CHFR ENSGALG00000002180 17 0.802 - - - - - - - 0.802 - - checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]
91. SMAD9 ENSGALG00000017050 11 0.802 - - - - - - - 0.802 - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
92. CTNNA3 ENSGALG00000002845 127 0.801 0.801 - - - - - - - - - catenin alpha 3 [Source:NCBI gene;Acc:423648]
93. POPDC2 ENSGALG00000014988 281 0.799 0.799 - - - - - - - - - popeye domain containing 2 [Source:NCBI gene;Acc:404229]
94. ACTA1 ENSGALG00000011086 2543 0.798 0.798 - - - - - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
95. MYT1L ENSGALG00000016384 147 0.798 - - - - - - - - - 0.798 myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
96. C9ORF9 C9ORF9 13 0.796 - - - - - - - 0.796 - -
97. FAM211B FAM211B 3808 0.795 - - - - - - - - 0.795 -
98. CCDC39 ENSGALG00000021855 23 0.795 - - - - - - - 0.795 - - coiled-coil domain containing 39
99. ATP6V1A ENSGALG00000014800 4 0.795 - - - - - - - 0.795 - - ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
100. MLNR ENSGALG00000017003 10 0.795 - - - - - - - 0.795 - - motilin receptor [Source:NCBI gene;Acc:428072]

There are 199 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA