Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EDN3

Gene Name Gene ID Reads Annotation
EDN3 ENSGALG00000040880 1061 endothelin 3 [Source:HGNC Symbol;Acc:HGNC:3178]











Genes with expression patterns similar to EDN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EDN3 ENSGALG00000040880 1061 9 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 endothelin 3 [Source:HGNC Symbol;Acc:HGNC:3178]
2. XPC ENSGALG00000006357 2484 1.685 - - - 0.808 - - - - 0.877 - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
3. AMACR ENSGALG00000003326 2657 1.534 - - - 0.763 - - 0.771 - - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
4. MED8 ENSGALG00000009993 3095 1.493 - - - 0.767 - - - - 0.726 - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
5. RAVER2 ENSGALG00000033759 4283 1.492 - - - 0.770 - - - - 0.722 - ribonucleoprotein, PTB binding 2 [Source:HGNC Symbol;Acc:HGNC:25577]
6. TAF9 4097 1.473 - - - 0.758 - - - - 0.715 - TATA-box binding protein associated factor 9
7. ARPC1B ENSGALG00000032588 2407 1.473 - - - - - - 0.721 - 0.752 - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
8. GPR20 ENSGALG00000041730 1926 0.926 - - - - - - - - 0.926 - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
9. CNKSR2 ENSGALG00000016391 131 0.911 - - - - - - - - 0.911 - connector enhancer of kinase suppressor of Ras 2, transcript variant X1
10. TMOD1 ENSGALG00000002125 933 0.906 - - - 0.906 - - - - - - tropomodulin 1 [Source:NCBI gene;Acc:395883]
11. MMRN2 770 0.9 - - - - - - - - 0.900 - multimerin 2, transcript variant X1
12. ZBTB17 ENSGALG00000035352 280 0.899 - - - 0.899 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
13. CA3 CA3 200 0.897 - - - 0.897 - - - - - -
14. MLH3 ENSGALG00000010304 231 0.897 - - - 0.897 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
15. TBK1 ENSGALG00000009840 1650 0.897 - - - 0.897 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
16. VWDE ENSGALG00000042443 160 0.895 - - - 0.895 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
17. ASRGL1 ENSGALG00000015949 403 0.893 - - - 0.893 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
18. TRIM62 ENSGALG00000028437 5124 0.891 - - - 0.891 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
19. FRRS1 ENSGALG00000005418 332 0.89 - - - 0.890 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
20. ENSGALG00000027412 ENSGALG00000027412 202 0.89 - - - 0.890 - - - - - -
21. KIAA1432 KIAA1432 1792 0.889 - - - 0.889 - - - - - -
22. MAP3K2 42 0.889 - - - - - - - - 0.889 - mitogen-activated protein kinase kinase kinase 2, transcript variant X3
23. KIF6 ENSGALG00000010057 84 0.888 - - - 0.888 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
24. DBN1 ENSGALG00000033405 216 0.888 - - - 0.888 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
25. MINA 3053 0.887 - - - 0.887 - - - - - - MYC induced nuclear antigen
26. PRDM4 ENSGALG00000012619 876 0.887 - - - 0.887 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
27. WDR96 WDR96 255 0.886 - - - 0.886 - - - - - -
28. SNORA31 SNORA31 183 0.886 - - - 0.886 - - - - - -
29. IFT43 ENSGALG00000020415 1218 0.885 - - - 0.885 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
30. C1QL1 ENSGALG00000028031 788 0.884 - - - - - - - - 0.884 - complement C1q like 1 [Source:HGNC Symbol;Acc:HGNC:24182]
31. GUF1 ENSGALG00000014217 211 0.884 - - - 0.884 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
32. TBC1D30 ENSGALG00000009859 994 0.881 - - - 0.881 - - - - - - TBC1 domain family member 30 [Source:HGNC Symbol;Acc:HGNC:29164]
33. FUCA1 ENSGALG00000004112 2154 0.881 - - - - - - - - 0.881 - alpha-L-fucosidase 1 [Source:HGNC Symbol;Acc:HGNC:4006]
34. PRKD1 ENSGALG00000009900 2094 0.879 - - - 0.879 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
35. ELMOD1 ENSGALG00000017169 2303 0.879 - - - 0.879 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
36. PAK2 ENSGALG00000006426 283 0.879 - - - - - - - - 0.879 - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
37. RNPC3 ENSGALG00000005162 269 0.878 - - - 0.878 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
38. CBX3 ENSGALG00000011038 40977 0.878 - - - 0.878 - - - - - - chromobox 3 [Source:NCBI gene;Acc:395355]
39. NCAPH ENSGALG00000032270 2103 0.878 - - - - - - - - 0.878 - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
40. GPATCH8 ENSGALG00000041556 484 0.878 - - - - - - - - 0.878 - G-patch domain containing 8 [Source:HGNC Symbol;Acc:HGNC:29066]
41. ADCY9 ENSGALG00000007779 766 0.878 - - - 0.878 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
42. VPS13B 2293 0.877 - - - 0.877 - - - - - - vacuolar protein sorting 13 homolog B
43. HINT3 ENSGALG00000044342 5674 0.877 - - - 0.877 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
44. CHCHD3 ENSGALG00000006489 18592 0.876 - - - 0.876 - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
45. TGS1 ENSGALG00000015340 5897 0.876 - - - 0.876 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
46. GFPT2 ENSGALG00000039705 562 0.876 - - - 0.876 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
47. PASK ENSGALG00000006016 3096 0.874 - - - 0.874 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
48. KDELC2 ENSGALG00000017158 479 0.872 - - - - - - 0.872 - - - KDEL motif containing 2 [Source:HGNC Symbol;Acc:HGNC:28496]
49. ENSGALG00000027849 ENSGALG00000027849 320 0.872 - - - - - - - - 0.872 -
50. KIN ENSGALG00000030702 1608 0.871 - - - 0.871 - - - - - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
51. ASPH ENSGALG00000030112 1622 0.87 - - - 0.870 - - - - - - aspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]
52. CXorf23 1582 0.869 - - - 0.869 - - - - - - chromosome X open reading frame 23, transcript variant X3
53. ASCC1 ENSGALG00000026019 3583 0.869 - - - 0.869 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
54. KIAA1462 1612 0.869 - - - 0.869 - - - - - - KIAA1462, transcript variant X4
55. MPP7 ENSGALG00000007408 2485 0.868 - - - - - - - - 0.868 - membrane palmitoylated protein 7 [Source:HGNC Symbol;Acc:HGNC:26542]
56. ENSGALG00000023608 ENSGALG00000023608 1538 0.866 - - - 0.866 - - - - - -
57. LRRCC1 ENSGALG00000039499 480 0.866 - - - 0.866 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
58. BTG1L ENSGALG00000004676 2293 0.865 - - - 0.865 - - - - - - protein BTG1-like
59. COPA ENSGALG00000009153 11618 0.865 - - - 0.865 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
60. ITGA9 ENSGALG00000029378 415 0.864 - - - 0.864 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
61. HPS5 ENSGALG00000027716 2466 0.863 - - - 0.863 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
62. PHLPP1 ENSGALG00000012888 398 0.863 - - - - - - - - 0.863 - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
63. PHF6 ENSGALG00000006094 1748 0.862 - - - 0.862 - - - - - - PHD finger protein 6 [Source:HGNC Symbol;Acc:HGNC:18145]
64. GTF3C4 ENSGALG00000031016 1221 0.86 - - - 0.860 - - - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
65. TICRR ENSGALG00000006631 495 0.86 - - - - - - - - 0.860 - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
66. CYP20A1 ENSGALG00000008730 930 0.86 - - - 0.860 - - - - - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
67. NDUFAF6 ENSGALG00000040366 1647 0.86 - - - 0.860 - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:HGNC Symbol;Acc:HGNC:28625]
68. AKT1 ENSGALG00000011620 4089 0.858 - - - 0.858 - - - - - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
69. BAG5 ENSGALG00000031062 4498 0.857 - - - 0.857 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
70. DEPDC5 ENSGALG00000006766 1592 0.857 - - - 0.857 - - - - - - DEP domain containing 5, transcript variant X6
71. TRDN ENSGALG00000014848 130 0.856 - - - - - - - - 0.856 - triadin
72. GLRX3 ENSGALG00000010464 22578 0.856 - - - 0.856 - - - - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
73. NCOA3 ENSGALG00000004570 243 0.855 - - - 0.855 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
74. ABCD2 ENSGALG00000042554 1607 0.855 - - - 0.855 - - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
75. DPY30 ENSGALG00000010621 6818 0.855 - - - 0.855 - - - - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
76. ELK4 ENSGALG00000042137 69 0.853 - - - - - - 0.853 - - - ELK4, ETS transcription factor
77. LAMB1 ENSGALG00000007905 7737 0.852 - - - 0.852 - - - - - - laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486]
78. FIGNL1 ENSGALG00000026363 2194 0.85 - - - 0.850 - - - - - - fidgetin like 1, transcript variant X2
79. IRF6 ENSGALG00000001405 3144 0.85 - - - 0.850 - - - - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
80. MFSD2A ENSGALG00000003879 5455 0.85 - - - 0.850 - - - - - - major facilitator superfamily domain containing 2A [Source:HGNC Symbol;Acc:HGNC:25897]
81. GJB1 ENSGALG00000005541 261 0.849 - - - - - - - - 0.849 - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
82. MRPS30 ENSGALG00000014874 3416 0.849 - - - 0.849 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
83. PDE4B ENSGALG00000011094 1871 0.849 - - - 0.849 - - - - - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
84. TK2 ENSGALG00000034216 5394 0.848 - - - 0.848 - - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
85. PANK1 ENSGALG00000006431 2910 0.847 - - - 0.847 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
86. SUMO1 ENSGALG00000008435 19847 0.847 - - - 0.847 - - - - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
87. GALNT12 ENSGALG00000013197 1330 0.846 - - - 0.846 - - - - - - polypeptide N-acetylgalactosaminyltransferase 12 [Source:HGNC Symbol;Acc:HGNC:19877]
88. MCCC2L ENSGALG00000011255 889 0.846 - - - 0.846 - - - - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
89. SOX6 ENSGALG00000006074 102 0.845 - - - - - - - - 0.845 - Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
90. ITPKB ENSGALG00000009068 324 0.843 - - - 0.843 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
91. HMHA1 HMHA1 929 0.843 - - - 0.843 - - - - - -
92. RMI2 ENSGALG00000007155 3508 0.843 - - - 0.843 - - - - - - RecQ mediated genome instability 2 [Source:NCBI gene;Acc:416628]
93. TUBGCP4 ENSGALG00000008549 352 0.842 - - - - - - 0.842 - - - tubulin gamma complex associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16691]
94. MOSPD1 ENSGALG00000006132 8503 0.842 - - - 0.842 - - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
95. ENSGALG00000007514 ENSGALG00000007514 4866 0.841 - - - 0.841 - - - - - -
96. C12orf45 C12orf45 2445 0.841 - - - 0.841 - - - - - -
97. SLC27A4 ENSGALG00000004965 3278 0.84 - - - 0.840 - - - - - - solute carrier family 27 member 4 [Source:HGNC Symbol;Acc:HGNC:10998]
98. CPNE7 ENSGALG00000000507 54 0.839 - - - - - - 0.839 - - - copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
99. RTN4IP1 ENSGALG00000015343 4366 0.839 - - - 0.839 - - - - - - reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]
100. FASTKD5 ENSGALG00000045410 386 0.838 - - - - - - - - 0.838 - FAST kinase domains 5 [Source:HGNC Symbol;Acc:HGNC:25790]

There are 441 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA