Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EDF1

Gene Name Gene ID Reads Annotation
EDF1 ENSGALG00000038003 6757 endothelial differentiation related factor 1 [Source:NCBI gene;Acc:417286]











Genes with expression patterns similar to EDF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EDF1 ENSGALG00000038003 6757 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 endothelial differentiation related factor 1 [Source:NCBI gene;Acc:417286]
2. BEND5 ENSGALG00000010505 3298 1.525 - - - - - - 0.709 0.816 - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
3. KIF3A ENSGALG00000006860 6209 1.522 - - - - - - 0.799 0.723 - - kinesin family member 3A [Source:NCBI gene;Acc:416332]
4. FBXW11 ENSGALG00000002229 5805 0.987 - - - - - - - 0.987 - - F-box and WD repeat domain containing 11 [Source:NCBI gene;Acc:416181]
5. ACBD3 ENSGALG00000009246 8405 0.976 - - - - - - - 0.976 - - acyl-CoA binding domain containing 3 [Source:NCBI gene;Acc:421317]
6. CDK9 ENSGALG00000035576 3659 0.974 - - - - - - - 0.974 - - cyclin dependent kinase 9 [Source:NCBI gene;Acc:417226]
7. PSMC5 ENSGALG00000000349 21346 0.973 - - - - - - - 0.973 - - proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:428274]
8. MRPS15 ENSGALG00000044433 15356 0.961 - - - - - - - 0.961 - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
9. TMEM167A ENSGALG00000027332 13862 0.96 - - - - - - - 0.960 - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
10. KLHL18 ENSGALG00000005582 3053 0.938 - - - - - - - 0.938 - - kelch like family member 18 [Source:NCBI gene;Acc:420406]
11. DCUN1D2 ENSGALG00000029145 2414 0.923 - - - - - - 0.923 - - - defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
12. MRPL40 ENSGALG00000001587 20893 0.921 - - - - - - - 0.921 - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
13. BUB1 ENSGALG00000008233 11536 0.916 - - - - - - - 0.916 - - BUB1 mitotic checkpoint serine/threonine kinase [Source:NCBI gene;Acc:421226]
14. MPHOSPH8 ENSGALG00000017145 6280 0.905 - - - - - - 0.905 - - - M-phase phosphoprotein 8 [Source:NCBI gene;Acc:418957]
15. CPQ ENSGALG00000030866 3962 0.9 - - - - - - 0.900 - - - carboxypeptidase Q [Source:NCBI gene;Acc:420238]
16. MRPL42 ENSGALG00000011293 15145 0.899 - - - - - - - 0.899 - - mitochondrial ribosomal protein L42 [Source:HGNC Symbol;Acc:HGNC:14493]
17. TLE3 ENSGALG00000008120 2655 0.898 - - - - - - 0.898 - - - transducin like enhancer of split 3, transcript variant X10
18. B4GAL-T7 B4GAL-T7 12356 0.898 - - - - - - 0.898 - - -
19. COPG COPG 6949 0.896 - - - - - - - 0.896 - -
20. DPCD ENSGALG00000007731 7225 0.895 - - - - - - 0.895 - - - deleted in primary ciliary dyskinesia homolog (mouse) [Source:NCBI gene;Acc:423852]
21. GBA2 ENSGALG00000002412 2913 0.891 - - - - - - 0.891 - - - glucosylceramidase beta 2 [Source:HGNC Symbol;Acc:HGNC:18986]
22. PDCL3 ENSGALG00000016772 14897 0.887 - - - - - - 0.887 - - - phosducin like 3 [Source:NCBI gene;Acc:418709]
23. ENSGALG00000004931 ENSGALG00000004931 2737 0.883 - - - - - - - 0.883 - -
24. RB1 ENSGALG00000016997 3712 0.882 - - - - - - 0.882 - - - retinoblastoma 1 [Source:NCBI gene;Acc:386582]
25. PIGX ENSGALG00000006408 5783 0.882 - - - - - - 0.882 - - - phosphatidylinositol glycan anchor biosynthesis class X [Source:HGNC Symbol;Acc:HGNC:26046]
26. BCL9 ENSGALG00000037655 4620 0.877 - - - - - - 0.877 - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
27. TUBD1 ENSGALG00000005173 1364 0.874 - - - - - - 0.874 - - - tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]
28. PREP ENSGALG00000015405 17050 0.873 - - - - - - - 0.873 - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
29. ATL1 ENSGALG00000012339 3789 0.873 - - - - - - 0.873 - - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
30. GYG1 ENSGALG00000035535 6311 0.87 - - - - - - 0.870 - - - glycogenin 1 [Source:NCBI gene;Acc:425050]
31. KDM4A ENSGALG00000010074 7219 0.868 - - - - - - 0.868 - - - lysine demethylase 4A
32. CAB39 ENSGALG00000027262 6779 0.866 - - - - - - 0.866 - - - calcium binding protein 39 [Source:HGNC Symbol;Acc:HGNC:20292]
33. LONP2 ENSGALG00000003942 3380 0.861 - - - - - - 0.861 - - - lon peptidase 2, peroxisomal [Source:NCBI gene;Acc:415740]
34. EXOSC8 ENSGALG00000017048 2939 0.86 - - - - - - 0.860 - - - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
35. STX12 ENSGALG00000000723 9703 0.859 - - - - - - 0.859 - - - syntaxin 12 [Source:HGNC Symbol;Acc:HGNC:11430]
36. PSMD6 ENSGALG00000007315 3906 0.858 - - - - - - 0.858 - - - proteasome 26S subunit, non-ATPase 6 [Source:HGNC Symbol;Acc:HGNC:9564]
37. MPP1 ENSGALG00000005071 3865 0.857 - - - - - - 0.857 - - - membrane palmitoylated protein 1 [Source:NCBI gene;Acc:422197]
38. ATP5J 14451 0.852 - - - - - - 0.852 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
39. BLCAP ENSGALG00000027126 12200 0.85 - - - - - - - 0.850 - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
40. MRPL21 ENSGALG00000004362 20796 0.847 - - - - - - - 0.847 - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
41. GNL2 ENSGALG00000001973 10148 0.846 - - - - - - - 0.846 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
42. SFXN1 ENSGALG00000033956 2713 0.845 - - - - - - - 0.845 - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
43. ATP11B ENSGALG00000008839 3455 0.845 - - - - - - - 0.845 - - ATPase phospholipid transporting 11B (putative), transcript variant X3
44. TMEM60 ENSGALG00000008330 6303 0.845 - - - - - - - 0.845 - - transmembrane protein 60 [Source:NCBI gene;Acc:417727]
45. COPS8 ENSGALG00000033385 10166 0.843 - - - - - - - 0.843 - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
46. NEO1 ENSGALG00000001774 10165 0.842 - - - - - - - 0.842 - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
47. ZCCHC10 ENSGALG00000036666 5148 0.842 - - - - - - - 0.842 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
48. NKIRAS2 ENSGALG00000028971 3414 0.842 - - - - - - - 0.842 - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
49. TEX10 ENSGALG00000013438 3121 0.842 - - - - - - - 0.842 - - testis expressed 10 [Source:NCBI gene;Acc:420993]
50. DIMT1 ENSGALG00000020569 5150 0.842 - - - - - - - 0.842 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
51. MYEF2 ENSGALG00000032546 7436 0.841 - - - - - - 0.841 - - - myelin expression factor 2 [Source:NCBI gene;Acc:415432]
52. SIRT6 ENSGALG00000001245 3716 0.841 - - - - - - - 0.841 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
53. MTFR2 ENSGALG00000019967 4436 0.841 - - - - - - - 0.841 - - mitochondrial fission regulator 2, transcript variant X1
54. RAD52 ENSGALG00000039171 6989 0.84 - - - - - - - 0.840 - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
55. FSBP 3152 0.839 - - - - - - - 0.839 - - fibrinogen silencer binding protein
56. DEPDC1B ENSGALG00000014729 5334 0.839 - - - - - - - 0.839 - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
57. CDKAL1 ENSGALG00000012677 4733 0.839 - - - - - - - 0.839 - - CDK5 regulatory subunit associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:21050]
58. HPS4 ENSGALG00000005595 2217 0.838 - - - - - - - 0.838 - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
59. GGA3 ENSGALG00000007992 3566 0.838 - - - - - - 0.838 - - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
60. DCK ENSGALG00000028501 8675 0.838 - - - - - - - 0.838 - - deoxycytidine kinase [Source:NCBI gene;Acc:422648]
61. MIEN1 ENSGALG00000026328 3396 0.838 - - - - - - - 0.838 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
62. ADAMTS6 ENSGALG00000014751 1293 0.838 - - - - - - - 0.838 - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
63. PRDM6 ENSGALG00000005351 2078 0.838 - - - - - - - 0.838 - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
64. SULF1 ENSGALG00000039553 5115 0.837 - - - - - - - 0.837 - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
65. TMEM26 ENSGALG00000025862 2222 0.837 - - - - - - - 0.837 - - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
66. MRPL32 ENSGALG00000037258 6861 0.836 - - - - - - - 0.836 - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
67. KCNK2 ENSGALG00000009687 1552 0.836 - - - - - - - 0.836 - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
68. CCDC104 CCDC104 6584 0.836 - - - - - - - 0.836 - -
69. RNF8 ENSGALG00000023256 5495 0.836 - - - - - - 0.836 - - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
70. MYO9A ENSGALG00000033618 4505 0.835 - - - - - - - 0.835 - - myosin IXA, transcript variant X10
71. PIGB ENSGALG00000037734 2193 0.834 - - - - - - - 0.834 - - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
72. CCDC15 1759 0.834 - - - - - - - 0.834 - - coiled-coil domain containing 15
73. TIPIN ENSGALG00000007649 3565 0.834 - - - - - - 0.834 - - - TIMELESS interacting protein [Source:NCBI gene;Acc:415548]
74. TTC37 ENSGALG00000014670 5715 0.833 - - - - - - - 0.833 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
75. TMEM200C ENSGALG00000030210 1434 0.833 - - - - - - - 0.833 - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
76. TNNI1 ENSGALG00000000313 4069 0.833 - - - - - - - 0.833 - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
77. ENSGALG00000002852 ENSGALG00000002852 2687 0.833 - - - - - - - 0.833 - -
78. GATC ENSGALG00000007195 8610 0.833 - - - - - - - 0.833 - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
79. SYNM ENSGALG00000007048 705 0.832 - - - - - - - 0.832 - - synemin [Source:NCBI gene;Acc:395599]
80. RAB20 ENSGALG00000016844 3250 0.832 - - - - - - - 0.832 - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
81. CNPY3 ENSGALG00000028471 1413 0.832 - - - - - - - 0.832 - - canopy FGF signaling regulator 3 [Source:HGNC Symbol;Acc:HGNC:11968]
82. KIF1A ENSGALG00000006221 1989 0.832 - - - - - - - 0.832 - - kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
83. EFR3B ENSGALG00000016605 234 0.832 - - - - - - - 0.832 - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
84. IVD ENSGALG00000040267 5820 0.832 - - - - - - - 0.832 - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
85. DUSP14 ENSGALG00000027641 3662 0.832 - - - - - - 0.832 - - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
86. ACVR2B ENSGALG00000006158 8692 0.831 - - - - - - - 0.831 - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
87. ARHGEF18 ENSGALG00000003572 224 0.831 - - - - - - - 0.831 - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
88. ENSGALG00000006278 ENSGALG00000006278 202 0.831 - - - - - - - 0.831 - -
89. NUDT1 ENSGALG00000004245 9034 0.831 - - - - - - 0.831 - - - nudix hydrolase 1 [Source:NCBI gene;Acc:416467]
90. AVENAII AVENAII 4552 0.831 - - - - - - - 0.831 - -
91. FAXDC2 ENSGALG00000003972 172 0.831 - - - - - - - 0.831 - - fatty acid hydroxylase domain containing 2 [Source:NCBI gene;Acc:416256]
92. MAGT1 ENSGALG00000007861 9105 0.83 - - - - - - - 0.830 - - magnesium transporter 1 [Source:NCBI gene;Acc:422332]
93. RAC2 ENSGALG00000012456 987 0.83 - - - - - - - 0.830 - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
94. RALGAPB ENSGALG00000001420 5112 0.829 - - - - - - 0.829 - - - Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
95. STX2 ENSGALG00000002536 10438 0.829 - - - - - - - 0.829 - - syntaxin 2 [Source:NCBI gene;Acc:378895]
96. OPTC ENSGALG00000003554 3698 0.827 - - - - - - 0.827 - - - opticin [Source:NCBI gene;Acc:395130]
97. BUD31 ENSGALG00000004705 19474 0.826 - - - - - - 0.826 - - - BUD31 homolog [Source:HGNC Symbol;Acc:HGNC:29629]
98. ENSGALG00000014375 ENSGALG00000014375 4741 0.821 - - - - - - 0.821 - - -
99. DAB2 ENSGALG00000003803 6143 0.821 - - - - - - - 0.821 - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
100. WNT4 ENSGALG00000041708 1277 0.821 - - - - - - 0.821 - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]

There are 177 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA