Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for EDEM3

Gene Name Gene ID Reads Annotation
EDEM3 ENSDARG00000074129 805 ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]










Genes with expression patterns similar to EDEM3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. EDEM3 ENSDARG00000074129 805 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
2. SLC25A6 ENSDARG00000005853, ENSDARG00000113366 975 2.397 - 0.908 - 0.778 - 0.711 - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
3. nubp2 ENSDARG00000055653 803 1.696 0.780 0.916 - - - - - - - nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
4. prkar1ab ENSDARG00000101755 555 1.675 - 0.915 - - - - - 0.760 - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b [Source:ZFIN;Acc:ZDB-GENE-050417-238]
5. pddc1 pddc1 257 1.673 0.737 0.936 - - - - - - -
6. rab40c ENSDARG00000061208 1072 1.659 - 0.903 - - - 0.756 - - - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
7. hsd11b3a hsd11b3a 1388 1.651 0.785 0.866 - - - - - - -
8. sec24c ENSDARG00000103516 1575 1.634 - 0.870 - - - - 0.764 - - SEC24 homolog C, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-4487]
9. fosb ENSDARG00000055751 170 1.615 - 0.769 - - - - 0.846 - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
10. cflara ENSDARG00000055966 464 1.615 - 0.891 - - - - 0.724 - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
11. lsg1 ENSDARG00000015352 812 1.608 - 0.824 - - - - 0.784 - - large 60S subunit nuclear export GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2184]
12. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.605 - 0.899 - - - - - 0.706 - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
13. spsb4b ENSDARG00000040538 372 1.594 0.722 0.872 - - - - - - - splA/ryanodine receptor domain and SOCS box containing 4b [Source:ZFIN;Acc:ZDB-GENE-040801-213]
14. golgb1 ENSDARG00000061951 2023 1.588 - - - - - 0.788 0.800 - - golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
15. sdf2 ENSDARG00000024026 805 1.576 - 0.830 - - - - 0.746 - - stromal cell-derived factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8823]
16. aim1a 2981 1.568 - 0.790 - - - 0.778 - - - crystallin beta-gamma domain containing 1a, transcript variant X1
17. fam105bb fam105bb 1253 1.566 0.707 0.859 - - - - - - -
18. ptbp2a ENSDARG00000101947 1921 1.565 - 0.848 - - - - 0.717 - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
19. serpinb1 ENSDARG00000055416 1320 1.553 0.711 0.842 - - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-400]
20. PRPSAP1 ENSDARG00000099222 1249 1.547 - 0.844 - - - 0.703 - - - phosphoribosyl pyrophosphate synthetase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040704-40]
21. nrp2b ENSDARG00000038446 783 1.546 - 0.828 - - - 0.718 - - - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
22. nfil3-2 658 1.535 0.777 - - - - 0.758 - - - nuclear factor, interleukin 3 regulated, member 2, transcript variant X1
23. mov10a ENSDARG00000015829 566 1.531 0.715 0.816 - - - - - - - Mov10 RISC complex RNA helicase a [Source:ZFIN;Acc:ZDB-GENE-091230-8]
24. erlin2 ENSDARG00000095968, ENSDARG00000110551 1023 1.515 - 0.776 - - - - 0.739 - - ER lipid raft associated 2 [Source:NCBI gene;Acc:100151163]
25. sptssa ENSDARG00000071203 2306 1.514 - 0.814 - 0.700 - - - - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
26. thraa ENSDARG00000000151 148 1.513 0.786 - - - - - 0.727 - - thyroid hormone receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-990415-263]
27. stam ENSDARG00000002127 1034 1.511 - - - - - 0.760 0.751 - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 [Source:ZFIN;Acc:ZDB-GENE-031118-123]
28. eva1a ENSDARG00000061405 896 1.507 - 0.722 - 0.785 - - - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
29. clasp2 ENSDARG00000020345 3382 1.507 - 0.744 - - - 0.763 - - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
30. cdk2 ENSDARG00000026577 2835 1.501 - 0.783 - - - 0.718 - - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
31. hebp2 ENSDARG00000042630 2308 1.491 - 0.763 - - - 0.728 - - - heme binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-914]
32. tanc2 tanc2 804 1.489 - - - - - 0.713 0.776 - -
33. stxbp3 ENSDARG00000008142 2604 1.489 - 0.768 - - 0.721 - - - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
34. mir184 48 1.488 0.728 - - - - - 0.760 - - microRNA 184
35. katna1 ENSDARG00000021827 221 1.466 - - - - - 0.726 0.740 - - katanin p60 (ATPase containing) subunit A 1 [Source:ZFIN;Acc:ZDB-GENE-050522-514]
36. ergic1 ENSDARG00000100047 814 1.453 - 0.739 - - - - 0.714 - - endoplasmic reticulum-golgi intermediate compartment 1 [Source:ZFIN;Acc:ZDB-GENE-050913-75]
37. ncaph2 ENSDARG00000033757 1042 1.444 0.714 0.730 - - - - - - - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
38. aldh2.1 ENSDARG00000089924 2883 1.434 0.714 - - - - 0.720 - - - aldehyde dehydrogenase 2 family member, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1262]
39. sas sas 1783 0.961 - 0.961 - - - - - - -
40. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 0.954 - 0.954 - - - - - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
41. golga4 ENSDARG00000075331 447 0.954 - 0.954 - - - - - - - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
42. si:dkey-229b18.3 ENSDARG00000095912 568 0.948 - 0.948 - - - - - - - si:dkey-229b18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6870]
43. map7d1b ENSDARG00000104701 1655 0.946 - 0.946 - - - - - - - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
44. wu:fu71h07 ENSDARG00000103860 558 0.945 - 0.945 - - - - - - - wu:fu71h07 [Source:ZFIN;Acc:ZDB-GENE-050302-121]
45. birc5a ENSDARG00000075621 2256 0.936 - 0.936 - - - - - - - baculoviral IAP repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030826-1]
46. dvl3a ENSDARG00000015707 1132 0.935 - - - - - - 0.935 - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
47. SEC16B ENSDARG00000099554 411 0.935 - 0.935 - - - - - - - SEC16 homolog B, endoplasmic reticulum export factor [Source:ZFIN;Acc:ZDB-GENE-050208-274]
48. exoc3l4 ENSDARG00000058180 923 0.932 - 0.932 - - - - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
49. snx15 ENSDARG00000020397, ENSDARG00000110059 491 0.932 - 0.932 - - - - - - - sorting nexin 15 [Source:ZFIN;Acc:ZDB-GENE-040426-1377]
50. EFTUD1 400 0.931 - 0.931 - - - - - - - elongation factor Tu GTP binding domain containing 1
51. si:ch211-89o5.1 si:ch211-89o5.1 91 0.928 - 0.928 - - - - - - -
52. BX005085.1 ENSDARG00000089947 230 0.928 - 0.928 - - - - - - -
53. mfsd11 ENSDARG00000102828 1043 0.927 - 0.927 - - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
54. sfrp1b ENSDARG00000057678, ENSDARG00000115373 95 0.926 - 0.926 - - - - - - - secreted frizzled-related protein 1b [Source:ZFIN;Acc:ZDB-GENE-061103-1]
55. ABTB2 ABTB2 584 0.926 - 0.926 - - - - - - -
56. itpkb ENSDARG00000010059 2352 0.926 - 0.926 - - - - - - - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
57. pcgf6 ENSDARG00000069681 2382 0.926 - 0.926 - - - - - - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
58. fbxo42 ENSDARG00000087545 262 0.925 - 0.925 - - - - - - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
59. afap1 ENSDARG00000055284 730 0.923 - 0.923 - - - - - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
60. mtmr12 ENSDARG00000059817, ENSDARG00000116606 622 0.919 - - - 0.919 - - - - - myotubularin related protein 12 [Source:ZFIN;Acc:ZDB-GENE-050401-1]
61. aup1 ENSDARG00000092609 2431 0.919 - 0.919 - - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
62. zgc:113385 zgc:113385 297 0.919 - 0.919 - - - - - - -
63. elovl6l ENSDARG00000038639 1184 0.917 - 0.917 - - - - - - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
64. WDR48 WDR48 448 0.916 - - - - - - 0.916 - -
65. pex16 ENSDARG00000058202 486 0.915 - 0.915 - - - - - - - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
66. LIMA1 LIMA1 908 0.915 - - - 0.915 - - - - -
67. si:dkey-222l20.1 si:dkey-222l20.1 375 0.914 - - - - - - 0.914 - -
68. caspb ENSDARG00000052039 4329 0.914 - 0.914 - - - - - - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
69. amdhd2 ENSDARG00000100376 656 0.913 - 0.913 - - - - - - - amidohydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1871]
70. PRIM2 ENSDARG00000052721 825 0.913 - 0.913 - - - - - - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
71. tmem194a tmem194a 745 0.912 - 0.912 - - - - - - -
72. lcn15 ENSDARG00000067851 140 0.912 - 0.912 - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
73. sowahcb ENSDARG00000059582 178 0.912 - 0.912 - - - - - - - sosondowah ankyrin repeat domain family Cb [Source:ZFIN;Acc:ZDB-GENE-061215-96]
74. nudt5 ENSDARG00000078073 779 0.911 - 0.911 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
75. RELL1 ENSDARG00000018312 579 0.91 - 0.910 - - - - - - - RELT like 1 [Source:ZFIN;Acc:ZDB-GENE-161213-2]
76. fancd2 ENSDARG00000053574 247 0.909 - 0.909 - - - - - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
77. DALRD3 ENSDARG00000068602 3062 0.908 - - - - - 0.908 - - - DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
78. ttc7b ENSDARG00000061207 710 0.907 - 0.907 - - - - - - - tetratricopeptide repeat domain 7B [Source:ZFIN;Acc:ZDB-GENE-070105-3]
79. ube2w ENSDARG00000044923 438 0.906 - - - - - - 0.906 - - ubiquitin-conjugating enzyme E2W (putative) [Source:ZFIN;Acc:ZDB-GENE-050506-94]
80. BX000999.4_1 BX000999.4_1 222 0.906 - 0.906 - - - - - - -
81. eml2 ENSDARG00000008808 706 0.905 - 0.905 - - - - - - - echinoderm microtubule associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-050706-71]
82. csad ENSDARG00000026348 1461 0.905 - 0.905 - - - - - - - cysteine sulfinic acid decarboxylase [Source:ZFIN;Acc:ZDB-GENE-041114-36]
83. babam1 ENSDARG00000077526 776 0.905 - 0.905 - - - - - - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
84. rasl12 ENSDARG00000002701 66 0.905 - - - - - - 0.905 - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
85. obscn obscn 146 0.905 - 0.905 - - - - - - -
86. arhgef16 ENSDARG00000077114 759 0.904 - 0.904 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 16 [Source:ZFIN;Acc:ZDB-GENE-081104-446]
87. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 0.904 - 0.904 - - - - - - - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
88. si:ch211-71n6.4 ENSDARG00000102234 2499 0.903 - 0.903 - - - - - - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
89. cdc20 ENSDARG00000100741 3264 0.903 - 0.903 - - - - - - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
90. ccnd2a ENSDARG00000051748 2506 0.9 - 0.900 - - - - - - - cyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
91. C13H10orf32 C13H10orf32 465 0.899 - 0.899 - - - - - - -
92. tmem8a ENSDARG00000032795 677 0.898 - 0.898 - - - - - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
93. trpm4 trpm4 501 0.897 - 0.897 - - - - - - -
94. igfbp1b ENSDARG00000038666 163 0.897 - 0.897 - - - - - - - insulin-like growth factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081210-3]
95. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 0.897 - 0.897 - - - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
96. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 0.897 - 0.897 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
97. c8a ENSDARG00000039516 495 0.895 - 0.895 - - - - - - - complement component 8, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040801-239]
98. soul3 ENSDARG00000102257 939 0.894 - 0.894 - - - - - - - heme-binding protein soul3 [Source:ZFIN;Acc:ZDB-GENE-060825-287]
99. cmasb 499 0.893 - 0.893 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
100. CR376783.1 ENSDARG00000074235 259 0.892 - 0.892 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]

There are 1092 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA