Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EDC4

Gene Name Gene ID Reads Annotation
EDC4 ENSGALG00000040875 44 enhancer of mRNA decapping 4 [Source:HGNC Symbol;Acc:HGNC:17157]











Genes with expression patterns similar to EDC4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EDC4 ENSGALG00000040875 44 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 enhancer of mRNA decapping 4 [Source:HGNC Symbol;Acc:HGNC:17157]
2. RBBP6_1 ENSGALG00000006043 26 0.903 - - - - - - - - - 0.903 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
3. DNAH7 ENSGALG00000007841 32 0.882 - - - - - - - - - 0.882 dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
4. FAM46D 22 0.868 - - - - - - 0.868 - - - family with sequence similarity 46 member D
5. ITGA6 ENSGALG00000034007 53 0.868 - - - - - - 0.868 - - - integrin subunit alpha 6 [Source:NCBI gene;Acc:396226]
6. IL17F ENSGALG00000016677 9 0.868 - - - - - - 0.868 - - - interleukin 17F
7. ZFYVE26 ENSGALG00000028762 18 0.857 - - - - - - - - - 0.857 zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
8. PAAF1 ENSGALG00000017318 605 0.854 - - - - - - - 0.854 - - proteasomal ATPase associated factor 1 [Source:NCBI gene;Acc:419061]
9. ZC3H7B ENSGALG00000011965 6 0.853 - - - - - - - - - 0.853 zinc finger CCCH-type containing 7B [Source:HGNC Symbol;Acc:HGNC:30869]
10. gga-mir-1600 ENSGALG00000025438 248 0.85 - - - - - - - - - 0.850 gga-mir-1600 [Source:miRBase;Acc:MI0007327]
11. ENSGALG00000023119 ENSGALG00000023119 156 0.849 - - - - - - - - - 0.849
12. SUB1L1 ENSGALG00000027147 73 0.848 - - - - - - - - - 0.848 SUB1 homolog (S. cerevisiae)-like 1
13. RGS6 ENSGALG00000009368 19 0.836 - - - - - - - - - 0.836 regulator of G-protein signaling 6 [Source:NCBI gene;Acc:395618]
14. ISPD ENSGALG00000010795 7 0.832 - - - - - - - - - 0.832 isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
15. LOC100858777 ENSGALG00000027624 58 0.829 - - - - - - - - - 0.829 rhodopsin, GQ-coupled-like
16. MMEL1 ENSGALG00000001115 46 0.827 - - - - - - - - - 0.827 membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
17. DENND1B ENSGALG00000002246 6 0.826 - - - - - - - - - 0.826 DENN domain containing 1B [Source:HGNC Symbol;Acc:HGNC:28404]
18. CHST8 ENSGALG00000004903 16 0.824 - - - - - - - - - 0.824 carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]
19. NOX3 ENSGALG00000013659 4 0.824 - - - - - - - - - 0.824 NADPH oxidase 3 [Source:HGNC Symbol;Acc:HGNC:7890]
20. NCX1 NCX1 9 0.824 - - - - - - - - - 0.824
21. ENSGALG00000012920 ENSGALG00000012920 8 0.824 - - - - - - - - - 0.824
22. IFNG ENSGALG00000009903 5 0.824 - - - - - - - - - 0.824 interferon gamma [Source:NCBI gene;Acc:396054]
23. SCT ENSGALG00000034822, ENSGALG00000037020 14 0.824 - - - - - - - - - 0.824 secretin, transcript variant X6
24. ROS1 ENSGALG00000014913 7 0.824 - - - - - - - - - 0.824 ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
25. C2 ENSGALG00000035721 5 0.824 - - - - - - - - - 0.824 complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]
26. GPR12 ENSGALG00000017102 4 0.824 - - - - - - - - - 0.824 G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
27. MUC4 4 0.824 - - - - - - - - - 0.824 mucin 4, cell surface associated, transcript variant X5
28. PLIN3 ENSGALG00000044632 370 0.823 - - - - - - - - - 0.823 perilipin 3, transcript variant X2
29. CFH ENSGALG00000002431 31 0.823 - - - - - - - - - 0.823 complement factor H, transcript variant X1
30. NKD1 ENSGALG00000003767 76 0.822 - - - - 0.822 - - - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
31. ABCC8 ENSGALG00000006172 41 0.821 - - - - 0.821 - - - - - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
32. PPTC7 ENSGALG00000004550 154 0.819 - - - - - - - - - 0.819 PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
33. STOML3 ENSGALG00000017039 6 0.818 - - - - - - - - - 0.818 stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420]
34. CSF3 ENSGALG00000030907 11 0.818 - - - - - - - - - 0.818 colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
35. SNAPC1 ENSGALG00000011868 65 0.816 - - - - - - - - - 0.816 small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
36. CPNE7 ENSGALG00000000507 54 0.813 - - - - - - - - - 0.813 copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
37. CCR5 ENSGALG00000037077 23 0.813 - - - - - - - - - 0.813 C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
38. ZNF770 ENSGALG00000009817 27 0.803 - - - - - - - - - 0.803 zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
39. LHX9 ENSGALG00000002223 12 0.802 - - - - - - - - - 0.802 LIM homeobox 9 [Source:NCBI gene;Acc:396397]
40. SLC4A10 ENSGALG00000030032 56 0.8 - - - - - - - 0.800 - - solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
41. gga-mir-6585 ENSGALG00000027202 102 0.799 - - - - - - - - - 0.799 gga-mir-6585 [Source:miRBase;Acc:MI0022405]
42. SERPINE3 ENSGALG00000017017 32 0.799 - - - - - - - - - 0.799 serpin family E member 3 [Source:HGNC Symbol;Acc:HGNC:24774]
43. ENSGALG00000013110 ENSGALG00000013110 51 0.797 - - - - - - 0.797 - - -
44. SPINK5 SPINK5 195 0.797 - - - - - - - - - 0.797
45. SDSL ENSGALG00000008317 55 0.793 - - - - - - - - - 0.793 serine dehydratase like [Source:NCBI gene;Acc:417030]
46. MISP 52 0.793 - - - - - - - - - 0.793 mitotic spindle positioning, transcript variant X2
47. ECSCR ENSGALG00000024379 313 0.791 - - - - - - - - - 0.791 endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
48. SPINK4 ENSGALG00000043964 50 0.791 - - - - - - - - - 0.791 serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
49. EXOC6 ENSGALG00000006763 119 0.791 - - - - - - - 0.791 - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
50. ENSGALG00000001629 ENSGALG00000001629 31 0.787 - - - - - - - - - 0.787
51. ADAMTS5 ENSGALG00000015795 6 0.786 - - - - - - - - - 0.786 ADAM metallopeptidase with thrombospondin type 1 motif 5 [Source:HGNC Symbol;Acc:HGNC:221]
52. TTC9 ENSGALG00000017652 16 0.786 - - - - - - - - - 0.786 tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
53. ESM1 ENSGALG00000027707 328 0.783 - - - - - - - - - 0.783 endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]
54. ANKFY1 ENSGALG00000001467 21 0.782 - - - - 0.782 - - - - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
55. GUCY1B3 29 0.781 - - - - - - - 0.781 - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
56. NRG3 ENSGALG00000042812 10 0.781 - - - - - - - 0.781 - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
57. RUNX1 ENSGALG00000016022 2 0.781 - - - - - - - 0.781 - - runt-related transcription factor 1 [Source:NCBI gene;Acc:396152]
58. TTC29 ENSGALG00000010009 4 0.781 - - - - - - - 0.781 - - tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
59. ENSGALG00000014888 ENSGALG00000014888 3 0.781 - - - - - - - 0.781 - -
60. ADPRH ENSGALG00000015473 7 0.781 - - - - - - - 0.781 - - ADP-ribosylarginine hydrolase [Source:NCBI gene;Acc:418452]
61. PGF ENSGALG00000026557 33 0.781 - - - - - - - 0.781 - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
62. FRMPD3 ENSGALG00000028975 3 0.781 - - - - - - - 0.781 - - FERM and PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29382]
63. DENND2A ENSGALG00000012857 350 0.781 - - - - - - - 0.781 - - DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
64. ENSGALG00000027203 ENSGALG00000027203 2 0.781 - - - - - - - 0.781 - -
65. POMGNT1 ENSGALG00000010351 3 0.781 - - - - - - - 0.781 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
66. PACRG ENSGALG00000011560 67 0.781 - - - - - - - 0.781 - - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
67. TCIRG1 ENSGALG00000036069 1117 0.78 - - - - - - - - - 0.780 T-cell immune regulator 1, ATPase H+ transporting V0 subunit a3 [Source:NCBI gene;Acc:395472]
68. TSPAN10 ENSGALG00000004525 6 0.779 - - - - - - - 0.779 - - tetraspanin 10 [Source:HGNC Symbol;Acc:HGNC:29942]
69. BDKRB2 ENSGALG00000011080 12 0.777 - - - - - - - 0.777 - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
70. CTNNA3 ENSGALG00000002845 127 0.774 - - - - - - - - - 0.774 catenin alpha 3 [Source:NCBI gene;Acc:423648]
71. SOX13 ENSGALG00000000583 30 0.771 - - - - - - - - - 0.771 SRY-box 13 [Source:HGNC Symbol;Acc:HGNC:11192]
72. AQP1 ENSGALG00000005209 111 0.77 - - - - - - - - - 0.770 aquaporin 1 [Source:NCBI gene;Acc:420384]
73. LRRC3B ENSGALG00000011314 26 0.769 - - - - - - - - - 0.769 leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:HGNC:28105]
74. LRRC49 ENSGALG00000004059 29 0.766 - - - - - - - - - 0.766 leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
75. ENSGALG00000026371 ENSGALG00000026371 106 0.765 - - - - - - - - - 0.765
76. SORCS3 ENSGALG00000008434 136 0.763 - - - - - - - - - 0.763 sortilin related VPS10 domain containing receptor 3 [Source:HGNC Symbol;Acc:HGNC:16699]
77. C12orf50 ENSGALG00000045093 9 0.763 - - - - - - - 0.763 - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
78. PTPRR ENSGALG00000010148 93 0.761 - - - - - - - 0.761 - - protein tyrosine phosphatase, receptor type R, transcript variant X4
79. TERF2IP ENSGALG00000000903 41 0.758 - - - - - - - - - 0.758 TERF2 interacting protein [Source:NCBI gene;Acc:395122]
80. TIMD4 ENSGALG00000003876 61 0.758 - - - - - - - 0.758 - - T-cell immunoglobulin and mucin domain containing 4 [Source:NCBI gene;Acc:416250]
81. ABLIM1 ENSGALG00000009048 19 0.757 - - - - 0.757 - - - - - actin binding LIM protein 1 [Source:NCBI gene;Acc:423911]
82. GAB3 ENSGALG00000008408 19 0.757 - - - - 0.757 - - - - - GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
83. SLCO4C1 ENSGALG00000026768 30 0.757 - - - - 0.757 - - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
84. U2_1 U2_1 13 0.757 - - - - 0.757 - - - - -
85. ZNF22 ZNF22 25 0.757 - - - - - - - - - 0.757
86. TPH2 ENSGALG00000010198 5 0.757 - - - - 0.757 - - - - - tryptophan hydroxylase 2 [Source:NCBI gene;Acc:408026]
87. HACD4 ENSGALG00000028142 395 0.757 - - - - - - - - - 0.757 3-hydroxyacyl-CoA dehydratase 4 [Source:HGNC Symbol;Acc:HGNC:20920]
88. ENSGALG00000028324 ENSGALG00000028324 1 0.757 - - - - 0.757 - - - - -
89. LETM2 ENSGALG00000036049 19 0.757 - - - - 0.757 - - - - - leucine zipper and EF-hand containing transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:14648]
90. CCDC67 CCDC67 3 0.757 - - - - 0.757 - - - - -
91. HOXD12 ENSGALG00000009274 637 0.757 - - - - 0.757 - - - - - homeobox D12 [Source:NCBI gene;Acc:396178]
92. ENSGALG00000024266 ENSGALG00000024266 5 0.757 - - - - 0.757 - - - - -
93. RGS1 ENSGALG00000002549 1 0.757 - - - - 0.757 - - - - - regulator of G protein signaling 1 [Source:HGNC Symbol;Acc:HGNC:9991]
94. AHR2 ENSGALG00000023742 21 0.757 - - - - 0.757 - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
95. FANCF ENSGALG00000003660 25 0.757 - - - - 0.757 - - - - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
96. TGFBRAP1 ENSGALG00000016795 81 0.757 - - - - 0.757 - - - - - transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
97. NRROS 72 0.756 - - - - - - - 0.756 - - negative regulator of reactive oxygen species, transcript variant X2
98. SCUBE3 ENSGALG00000002675 12 0.754 - - - - - - - 0.754 - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
99. SERGEF ENSGALG00000006231 35 0.754 - - - - - - - 0.754 - - secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
100. IGFBP2 ENSGALG00000011469 26 0.754 - - - - - - - 0.754 - - insulin like growth factor binding protein 2 [Source:NCBI gene;Acc:396315]

There are 50 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA