Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ECM1_1

Gene Name Gene ID Reads Annotation
ECM1_1 ECM1_1 4










Genes with expression patterns similar to ECM1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ECM1_1 ECM1_1 4 4 - - 1.000 1.000 - - - 1.000 1.000
2. phc2b ENSDARG00000013224 3 2 - - 1.000 - - - - - 1.000 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
3. si:ch211-73m21.2 si:ch211-73m21.2 5 1.73 - - - - - - - 0.812 0.918
4. AL929007.2 AL929007.2 117 1.521 - - - - - - - 0.763 0.758
5. SCARNA6 SCARNA6 258 1 - - - - - - - 1.000 -
6. CU855880.2 CU855880.2 3 1 - - 1.000 - - - - - -
7. iqsec3a ENSDARG00000099850, ENSDARG00000116182 12 1 - - 1.000 - - - - - - IQ motif and Sec7 domain 3a [Source:ZFIN;Acc:ZDB-GENE-041210-343]
8. CABZ01075242.1 ENSDARG00000114227 9 1 - - 1.000 - - - - - -
9. CU695006.1 CU695006.1 4 1 - - - - - - - - 1.000
10. CR774199.1 CR774199.1 1 1 - - - - - - - - 1.000
11. sult1st8 sult1st8 6 1 - - - - - - - 1.000 -
12. GOLT1A ENSDARG00000088933 14 1 - - - - - - - - 1.000 golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
13. si:dkey-43b14.9 si:dkey-43b14.9 1 1 - - - - - - - - 1.000
14. TGFBR3L TGFBR3L 16 1 - - - - - - - 1.000 -
15. VPS72 11 1 - - - - - - - 1.000 - vacuolar protein sorting 72 homolog (S. cerevisiae)
16. or111-11 ENSDARG00000041019 5 1 - - 1.000 - - - - - - odorant receptor, family D, subfamily 111, member 11 [Source:ZFIN;Acc:ZDB-GENE-010308-10]
17. SNORA3_2 SNORA3_2 2 1 - - - - - - - 1.000 -
18. BX323876.2 ENSDARG00000104577 62 1 - - 1.000 - - - - - -
19. zgc:174259 ENSDARG00000091136, ENSDARG00000115432 3 1 - - - - - - - - 1.000 zgc:174259 [Source:ZFIN;Acc:ZDB-GENE-080213-10]
20. CABZ01076801.1 CABZ01076801.1 3 1 - - - - - - - 1.000 -
21. camk1ga ENSDARG00000044526 5 1 - - - - - - - 1.000 - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
22. cacng3a ENSDARG00000058460 2 1 - - - - - - - - 1.000 calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
23. CUZD1_3 CUZD1_3 9 1 - - 1.000 - - - - - -
24. chrnb2a ENSDARG00000008674, ENSDARG00000115778 1 1 - - - - - - - - 1.000 cholinergic receptor, nicotinic, beta 2a [Source:ZFIN;Acc:ZDB-GENE-090312-169]
25. si:dkey-155d18.1 1 1 - - - - - - - 1.000 - si:dkey-155d18.1
26. CR847526.1 CR847526.1 0 1 - - - - - - - 1.000 -
27. SLC5A10 ENSDARG00000074212 11 1 - - 1.000 - - - - - - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
28. myh11b ENSDARG00000100972 2 1 - - - - - - - 1.000 - myosin, heavy chain 11b, smooth muscle [Source:ZFIN;Acc:ZDB-GENE-101124-2]
29. si:ch211-238e22.2 ENSDARG00000112450 23 1 - - - - - - - 1.000 - si:ch211-238e22.2 [Source:ZFIN;Acc:ZDB-GENE-041210-346]
30. SLC26A3 SLC26A3 8 1 - - 1.000 - - - - - -
31. casp8l1 2 1 - - - - - - - - 1.000 caspase 8, apoptosis-related cysteine peptidase, like 1, transcript variant X1
32. EML4 7 1 - - - - - - - 1.000 - echinoderm microtubule associated protein like 4
33. slc5a9 ENSDARG00000005518 16 1 - - 1.000 - - - - - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
34. inpp5k inpp5k 2 1 - - 1.000 - - - - - -
35. or112-1 ENSDARG00000077211 2 1 - - 1.000 - - - - - - odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
36. C5H11orf53 C5H11orf53 3 1 - - - - - - - 1.000 -
37. si:ch1073-468o21.1 si:ch1073-468o21.1 0 1 - - - - - - - 1.000 -
38. flt3 ENSDARG00000058503 32 1 - - 1.000 - - - - - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
39. gabbr1a ENSDARG00000018967 2 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
40. Metazoa_SRP_19 Metazoa_SRP_19 17 1 - - 1.000 - - - - - -
41. CABZ01079551.1 CABZ01079551.1 6 1 - - - - - - - 1.000 -
42. CABZ01083473.1 CABZ01083473.1 0 1 - - 1.000 - - - - - -
43. NOD1 ENSDARG00000036308 1 1 - - - - - - - - 1.000 nucleotide-binding oligomerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-9]
44. MYRFL ENSDARG00000101645 15 1 - - - - - - - - 1.000 myelin regulatory factor like [Source:ZFIN;Acc:ZDB-GENE-180312-1]
45. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - 1.000 - - - - - -
46. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - - - - 1.000 jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
47. GBGT1 GBGT1 1 1 - - - - - - - 1.000 -
48. gpr12 ENSDARG00000062934 7 1 - - - - - - - - 1.000 G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
49. si:ch211-152p23.2 ENSDARG00000094519 4 1 - - - - - - - - 1.000 si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
50. si:dkey-163m14.6 5 1 - - 1.000 - - - - - - si:dkey-163m14.6
51. si:dkeyp-33e11.1 6 1 - - - - - - - - 1.000 si:dkeyp-33e11.1, transcript variant X3
52. cbln14 ENSDARG00000053845, ENSDARG00000116350 0 1 - - - - - - - 1.000 - cerebellin 14 [Source:ZFIN;Acc:ZDB-GENE-040724-5]
53. SSX2IP_1 SSX2IP_1 1 1 - - - - - - - 1.000 -
54. crhb ENSDARG00000027657 9 1 - - 1.000 - - - - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
55. FAM179B FAM179B 0 1 - - - - - - - 1.000 -
56. si:dkey-29n19.3 si:dkey-29n19.3 0 1 - - 1.000 - - - - - -
57. TRIM35_5 TRIM35_5 1 1 - - - - - - - 1.000 -
58. si:dkey-46g23.3 si:dkey-46g23.3 16 1 - - - - - - - - 1.000
59. syt15 ENSDARG00000079926 8 1 - - - - - - - - 1.000 synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
60. CU469313.1 CU469313.1 1 1 - - - - - - - - 1.000
61. NPTN NPTN 3 1 - - 1.000 - - - - - -
62. CDHR5 CDHR5 2 1 - - - - - - - - 1.000
63. CR388413.1 ENSDARG00000100537 1 1 - - 1.000 - - - - - -
64. si:dkey-58f10.13 ENSDARG00000095532 11 1 - - 1.000 - - - - - - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
65. xylb ENSDARG00000043260 0 1 - - - - - - - 1.000 - xylulokinase homolog (H. influenzae) [Source:ZFIN;Acc:ZDB-GENE-040426-1373]
66. si:ch211-207c6.6 si:ch211-207c6.6 32 1 - - 1.000 - - - - - -
67. irf3 ENSDARG00000076251 8 1 - - 1.000 - - - - - - interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]
68. CR854942.1 ENSDARG00000110092 1 1 - - - - - - - 1.000 -
69. si:dkey-236e20.3 ENSDARG00000071495, ENSDARG00000109868 1 1 - - - - - - - - 1.000 si:dkey-236e20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-722]
70. CU856520.1 ENSDARG00000098941 2 1 - - 1.000 - - - - - -
71. zgc:175135 ENSDARG00000077741, ENSDARG00000079534, ENSDARG00000105499 0 1 - - 1.000 - - - - - - zgc:175135 [Source:ZFIN;Acc:ZDB-GENE-080214-1]
72. rgs9a ENSDARG00000037925 3 1 - - - - - - - - 1.000 regulator of G protein signaling 9a [Source:ZFIN;Acc:ZDB-GENE-060929-92]
73. camkvl ENSDARG00000057000 40 1 - - 1.000 - - - - - - CaM kinase-like vesicle-associated, like [Source:ZFIN;Acc:ZDB-GENE-090311-58]
74. cdc73 ENSDARG00000020201 22 1 - - - - - - - 1.000 - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
75. abcc9 ENSDARG00000015985 20 1 - - 1.000 - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
76. si:dkey-11f7.4 si:dkey-11f7.4 1 1 - - 1.000 - - - - - -
77. noxa1 ENSDARG00000056047, ENSDARG00000110918, ENSDARG00000112288 7 1 - - - - - - - - 1.000 NADPH oxidase activator 1 [Source:ZFIN;Acc:ZDB-GENE-050913-32]
78. zgc:171750 ENSDARG00000078638 4 1 - - 1.000 - - - - - - zgc:171750 [Source:ZFIN;Acc:ZDB-GENE-071004-30]
79. si:dkey-178e17.1 ENSDARG00000080000 4 1 - - 1.000 - - - - - - si:dkey-178e17.1 [Source:ZFIN;Acc:ZDB-GENE-081104-41]
80. nmbr ENSDARG00000054152 0 1 - - 1.000 - - - - - - neuromedin B receptor [Source:ZFIN;Acc:ZDB-GENE-041014-369]
81. cyp3a65 ENSDARG00000103295 7 1 - - - - - - - - 1.000 cytochrome P450, family 3, subfamily A, polypeptide 65 [Source:ZFIN;Acc:ZDB-GENE-050604-1]
82. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 1 - - - - - - - - 1.000 dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
83. KCNJ2 KCNJ2 1 1 - - - - - - - - 1.000
84. pigf ENSDARG00000032780 7 1 - - 1.000 - - - - - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
85. si:dkey-93h22.6 si:dkey-93h22.6 7 1 - - - - - - - 1.000 -
86. slc25a1a ENSDARG00000057110 6 1 - - - - - - - - 1.000 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1172]
87. C24H16orf11 C24H16orf11 32 1 - - 1.000 - - - - - -
88. si:ch211-132a5.4 si:ch211-132a5.4 1 1 - - - - - - - 1.000 -
89. pdlim3a ENSDARG00000011023, ENSDARG00000115861 3 1 - - 1.000 - - - - - - PDZ and LIM domain 3a [Source:ZFIN;Acc:ZDB-GENE-050505-1]
90. CR628365.1 ENSDARG00000097736 29 1 - - - - - - - 1.000 -
91. ydjc ENSDARG00000062655 5 1 - - 1.000 - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
92. U1_19 U1_19 1 1 - - - - - - - - 1.000
93. si:dkey-26i24.2 si:dkey-26i24.2 3 1 - - 1.000 - - - - - -
94. DHPS ENSDARG00000003270 85 1 - - - - - - - - 1.000 deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
95. KIF25 ENSDARG00000017532 1 1 - - - - - - - 1.000 - kinesin family member 25 [Source:ZFIN;Acc:ZDB-GENE-041001-167]
96. CABZ01081656.1 CABZ01081656.1 14 1 - - 1.000 - - - - - -
97. PLA2G4C_1 PLA2G4C_1 2 1 - - - - - - - 1.000 -
98. znf330 ENSDARG00000020494 3 1 - - - - - - - - 1.000 zinc finger protein 330 [Source:ZFIN;Acc:ZDB-GENE-040426-2697]
99. crygm2e ENSDARG00000044875 1 1 - - 1.000 - - - - - - crystallin, gamma M2e [Source:ZFIN;Acc:ZDB-GENE-081105-116]
100. si:dkey-233e3.2 3 1 - - - - - - - - 1.000 si:dkey-233e3.2, transcript variant X1

There are 171 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA