Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ECHDC1

Gene Name Gene ID Reads Annotation
ECHDC1 ENSGALG00000014828 958 ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]











Genes with expression patterns similar to ECHDC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ECHDC1 ENSGALG00000014828 958 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
2. COPS7B ENSGALG00000007752 1588 1.707 - - - - - - 0.818 - - 0.889 COP9 signalosome subunit 7B [Source:HGNC Symbol;Acc:HGNC:16760]
3. NUDCD2 ENSGALG00000001726 6303 1.671 - - - - - 0.730 - 0.941 - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
4. WARS ENSGALG00000011228 193 1.654 - - - - - 0.811 - - - 0.843 tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
5. WDR59 ENSGALG00000002798 815 1.65 - - - - - 0.803 0.847 - - - WD repeat domain 59 [Source:NCBI gene;Acc:415688]
6. OSTM1 ENSGALG00000015306 192 1.638 - - - - - - 0.775 - - 0.863 osteopetrosis associated transmembrane protein 1 [Source:NCBI gene;Acc:421773]
7. TPCN3 ENSGALG00000008198 124 1.626 - - - - - 0.838 - - - 0.788 two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
8. WHAMM ENSGALG00000006002 1678 1.576 - - - - - 0.839 0.737 - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
9. GPR180 ENSGALG00000016897 1545 1.553 - - - - - - 0.739 - - 0.814 G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
10. NKIRAS1 ENSGALG00000011289 311 1.551 - - - - - 0.765 - - - 0.786 NFKB inhibitor interacting Ras like 1 [Source:HGNC Symbol;Acc:HGNC:17899]
11. CREB1 ENSGALG00000008494 2219 1.536 - - - - - 0.774 - - - 0.762 cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
12. NPHP4 ENSGALG00000000966 1698 1.517 - - - - - 0.745 - - - 0.772 nephrocystin 4, transcript variant X5
13. C1H12ORF4 2696 1.494 - - - - - 0.772 0.722 - - - chromosome 1 open reading frame, human C12orf4
14. ENSGALG00000026058 ENSGALG00000026058 144 1.48 - - - 0.751 - - - - - 0.729
15. VPS8 ENSGALG00000006704 5419 1.477 - - - - - - 0.747 - - 0.730 VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
16. MYCBPAP ENSGALG00000007661 369 1.454 - - - 0.730 - - - - - 0.724 MYCBP associated protein [Source:HGNC Symbol;Acc:HGNC:19677]
17. FLNB ENSGALG00000005678 68 1.453 - - - 0.712 - - - - - 0.741 filamin B [Source:NCBI gene;Acc:378913]
18. ENSGALG00000026930 ENSGALG00000026930 681 1.441 - - - - - - 0.738 - - 0.703
19. CCDC47 ENSGALG00000000564 6584 1.417 - - - - - 0.711 - - - 0.706 coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
20. ENSGALG00000026592 ENSGALG00000026592 4331 1 - - - - - - - 1.000 - -
21. HIAT1 HIAT1 447 1 - - - - - - - 1.000 - -
22. SNRNP25 ENSGALG00000026559 2097 0.999 - - - - - - - 0.999 - - small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]
23. CHST10 ENSGALG00000016769 2472 0.999 - - - - - - - 0.999 - - carbohydrate sulfotransferase 10 [Source:NCBI gene;Acc:395206]
24. APCDD1 ENSGALG00000000894 1482 0.999 - - - - - - - 0.999 - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
25. TCF15 ENSGALG00000026276 3646 0.999 - - - - - - - 0.999 - - transcription factor 15 [Source:NCBI gene;Acc:395788]
26. CHMP7 ENSGALG00000000409 8967 0.998 - - - - - - - 0.998 - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
27. ORAI2 ENSGALG00000001837 2528 0.998 - - - - - - - 0.998 - - ORAI calcium release-activated calcium modulator 2 [Source:NCBI gene;Acc:417509]
28. MTFR1L ENSGALG00000000998 3457 0.998 - - - - - - - 0.998 - - mitochondrial fission regulator 1 like [Source:HGNC Symbol;Acc:HGNC:28836]
29. SLC25A33 ENSGALG00000002519 4173 0.998 - - - - - - - 0.998 - - solute carrier family 25 member 33 [Source:HGNC Symbol;Acc:HGNC:29681]
30. CSRNP1 ENSGALG00000027905 3141 0.998 - - - - - - - 0.998 - - cysteine and serine rich nuclear protein 1 [Source:HGNC Symbol;Acc:HGNC:14300]
31. GSTK1 ENSGALG00000014708 4687 0.997 - - - - - - - 0.997 - - glutathione S-transferase kappa 1 [Source:NCBI gene;Acc:418302]
32. CMIP ENSGALG00000038494 5016 0.997 - - - - - - - 0.997 - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
33. SEC23A_1 ENSGALG00000010150 14745 0.996 - - - - - - - 0.996 - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
34. DPP9 ENSGALG00000004200 4515 0.995 - - - - - - - 0.995 - - dipeptidyl peptidase 9 [Source:HGNC Symbol;Acc:HGNC:18648]
35. WDR70 ENSGALG00000003708 5835 0.994 - - - - - - - 0.994 - - WD repeat domain 70 [Source:NCBI gene;Acc:427444]
36. DCN ENSGALG00000011274 4166 0.994 - - - - - - - 0.994 - - decorin [Source:NCBI gene;Acc:417892]
37. CCDC101 CCDC101 9111 0.993 - - - - - - - 0.993 - -
38. TRAPPC8 ENSGALG00000015157 4308 0.993 - - - - - - - 0.993 - - trafficking protein particle complex 8, transcript variant X5
39. DR1 ENSGALG00000005858 8016 0.993 - - - - - - - 0.993 - - down-regulator of transcription 1 [Source:NCBI gene;Acc:424496]
40. USPL1 ENSGALG00000017079 6263 0.992 - - - - - - - 0.992 - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
41. TMEM128 ENSGALG00000014992 6567 0.989 - - - - - - - 0.989 - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
42. NDUFA7 ENSGALG00000000629 14046 0.986 - - - - - - - 0.986 - - NADH:ubiquinone oxidoreductase subunit A7
43. PDAP1 ENSGALG00000036552 28881 0.986 - - - - - - - 0.986 - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
44. RWDD1 ENSGALG00000014953 9986 0.984 - - - - - - - 0.984 - - RWD domain containing 1 [Source:NCBI gene;Acc:421741]
45. PMM2 ENSGALG00000007326 8260 0.982 - - - - - - - 0.982 - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
46. CASP8AP2 ENSGALG00000015611 5657 0.977 - - - - - - - 0.977 - - caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
47. NCKAP1 ENSGALG00000002750 22749 0.973 - - - - - - - 0.973 - - NCK associated protein 1 [Source:HGNC Symbol;Acc:HGNC:7666]
48. LZIC ENSGALG00000002616 9052 0.965 - - - - - - - 0.965 - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
49. KIF23 ENSGALG00000008095 9919 0.962 - - - - - - - 0.962 - - kinesin family member 23 [Source:NCBI gene;Acc:415567]
50. SCP2 ENSGALG00000010652 19563 0.952 - - - - - - - 0.952 - - sterol carrier protein 2 [Source:NCBI gene;Acc:396550]
51. ENSGALG00000021439 ENSGALG00000021439 628 0.951 - - - - - - - - - 0.951
52. GSTAL2 ENSGALG00000028551 4899 0.939 - - - - - - - 0.939 - - glutathione S-transferase alpha-like 2, transcript variant X4
53. RFX3 ENSGALG00000010179 305 0.935 - - - - - - - - - 0.935 regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
54. G3BP1 ENSGALG00000004160 36795 0.93 - - - - - - - 0.930 - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
55. LPGAT1 ENSGALG00000009848 33 0.925 - - - - - - - - - 0.925 lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
56. HERPUD1 ENSGALG00000001220 18 0.923 - - - - - - - - - 0.923 homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
57. TPCN2 ENSGALG00000007550 10 0.923 - - - - - - - - - 0.923 two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
58. LANCL3 ENSGALG00000016265 9 0.923 - - - - - - - - - 0.923 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
59. PAG1 ENSGALG00000034188 9 0.923 - - - - - - - - - 0.923 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:HGNC Symbol;Acc:HGNC:30043]
60. IKBKAP 4508 0.922 - - - - - - - 0.922 - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
61. RAD54L2 ENSGALG00000003243 187 0.922 - - - - - - - - - 0.922 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
62. DDX19B ENSGALG00000039967 49600 0.922 - - - - - - - 0.922 - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
63. EHD4 ENSGALG00000008950 22 0.919 - - - - - - - - - 0.919 EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
64. POLR3B ENSGALG00000012655 704 0.918 - - - - - - - - - 0.918 Gallus gallus RNA polymerase III subunit B (POLR3B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321490]
65. PLEKHA1 ENSGALG00000034548 34 0.917 - - - - - - - - - 0.917 pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
66. S1PR1 ENSGALG00000005208 12 0.916 - - - - - - - - - 0.916 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
67. SCL SCL 69 0.915 - - - - - - - - - 0.915
68. FANCA ENSGALG00000000516 250 0.914 - - - - - - - - - 0.914 Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
69. LONRF2 ENSGALG00000016768 193 0.914 - - - - - - - - - 0.914 LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
70. SIAT7E SIAT7E 13 0.913 - - - - - - - - - 0.913
71. PRTFDC1 ENSGALG00000007694 111 0.91 - - - - - - - - - 0.910 phosphoribosyl transferase domain containing 1 [Source:NCBI gene;Acc:420499]
72. AKAP10 ENSGALG00000004679 103 0.909 - - - - - - - - - 0.909 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
73. FAM160A2 ENSGALG00000003416 23 0.909 - - - - - - - - - 0.909 family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
74. NEURL NEURL 221 0.908 - - - - - - - - - 0.908
75. WDR63 ENSGALG00000008696 15 0.907 - - - - - - - - - 0.907 WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
76. PRPF38A ENSGALG00000010627 2476 0.906 - - - - - - - 0.906 - - pre-mRNA processing factor 38A [Source:NCBI gene;Acc:771795]
77. FER1L6 ENSGALG00000033783 196 0.904 - - - - - - - - - 0.904 fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
78. ATP6AP2 ENSGALG00000016241 257 0.904 - - - - - - - - - 0.904 ATPase H+ transporting accessory protein 2 [Source:NCBI gene;Acc:418573]
79. XYLT1 ENSGALG00000006757 169 0.903 - - - - - - - - - 0.903 xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
80. SP2 ENSGALG00000000233 43 0.902 - - - - - - - - - 0.902 Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
81. SCAF4 ENSGALG00000033965 2027 0.899 - - - - - - - - - 0.899 SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
82. GAA ENSGALG00000038853 158 0.897 - - - - - - - - - 0.897 glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
83. CSMD3 ENSGALG00000031578 23 0.897 - - - - - - - - - 0.897 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
84. CSRP3 ENSGALG00000004044 456 0.896 - - - - - - - - - 0.896 cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
85. TBCD ENSGALG00000001503 7880 0.896 - - - - - - - 0.896 - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
86. TFAP2C ENSGALG00000007690 768 0.894 - - - - - - 0.894 - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
87. CCP110 ENSGALG00000006925 59 0.893 - - - - - - - - - 0.893 centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
88. TMED2 ENSGALG00000003307 20704 0.893 - - - - - - - 0.893 - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
89. NIPAL4 ENSGALG00000039687 29 0.892 - - - - - 0.892 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
90. CCDC88C ENSGALG00000040156 6191 0.892 - - - - - - - 0.892 - - coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]
91. GSPT1 15580 0.892 - - - - - - - 0.892 - - G1 to S phase transition 1, transcript variant X1
92. CHD2 ENSGALG00000006949 1076 0.89 - - - - - - - - - 0.890 chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
93. PAIP2 11856 0.89 - - - - - - - 0.890 - - poly(A) binding protein interacting protein 2, transcript variant X1
94. NAPRT1 NAPRT1 227 0.888 - - - - - 0.888 - - - -
95. JAG1 ENSGALG00000009020 25 0.887 - - - - - - - - - 0.887 jagged 1 [Source:HGNC Symbol;Acc:HGNC:6188]
96. ZNF511 ENSGALG00000003533 234 0.887 - - - - - - - - - 0.887 zinc finger protein 511 [Source:HGNC Symbol;Acc:HGNC:28445]
97. GABARAPL2 ENSGALG00000003208 9195 0.886 - - - - - - - 0.886 - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
98. GTF3C4 ENSGALG00000031016 1221 0.886 - - - - - 0.886 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
99. CHAC1 ENSGALG00000027874 242 0.885 - - - - - - - - - 0.885 ChaC glutathione specific gamma-glutamylcyclotransferase 1 [Source:NCBI gene;Acc:423209]
100. ENSGALG00000009344 ENSGALG00000009344 330 0.885 - - - - - - - - - 0.885

There are 561 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA