Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EBF1

Gene Name Gene ID Reads Annotation
EBF1 ENSGALG00000003699 23 early B-cell factor 1 [Source:NCBI gene;Acc:395512]











Genes with expression patterns similar to EBF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. EBF1 ENSGALG00000003699 23 4 - - 1.000 1.000 - 1.000 - - - 1.000 early B-cell factor 1 [Source:NCBI gene;Acc:395512]
2. TMEM240 ENSGALG00000035387 14 1 - - 1.000 - - - - - - - transmembrane protein 240 [Source:HGNC Symbol;Acc:HGNC:25186]
3. FAM105A ENSGALG00000012965 6 1 - - 1.000 - - - - - - - family with sequence similarity 105 member A [Source:NCBI gene;Acc:769855]
4. SERPING1 ENSGALG00000007381 144 1 - - 1.000 - - - - - - - serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]
5. ENSGALG00000022694 ENSGALG00000022694 1 1 - - 1.000 - - - - - - -
6. HOXD12 ENSGALG00000009274 637 1 - - 1.000 - - - - - - - homeobox D12 [Source:NCBI gene;Acc:396178]
7. GRAMD2 GRAMD2 3 1 - - 1.000 - - - - - - -
8. CAMK4L ENSGALG00000015203 5 1 - - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase IV-like, transcript variant X3
9. SHISA6 ENSGALG00000034516 0 1 - - 1.000 - - - - - - - shisa family member 6 [Source:HGNC Symbol;Acc:HGNC:34491]
10. RAB13 RAB13 22 1 - - 1.000 - - - - - - -
11. C21orf62 ENSGALG00000040059 5 1 - - 1.000 - - - - - - - chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
12. AMMECR1 ENSGALG00000008074 5 1 - - 1.000 - - - - - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
13. PLA2G1BL ENSGALG00000007236 4 1 - - 1.000 - - - - - - - phospholipase A2, major isoenzyme-like
14. KMO ENSGALG00000007503 7 1 - - 1.000 - - - - - - - kynurenine 3-monooxygenase [Source:HGNC Symbol;Acc:HGNC:6381]
15. ENSGALG00000006384 ENSGALG00000006384 3 1 - - 1.000 - - - - - - -
16. ENSGALG00000025610 ENSGALG00000025610 0 1 - - 1.000 - - - - - - -
17. CACNA2D4 4 0.985 - - - 0.985 - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 4
18. CCDC30 15 0.929 - - - 0.929 - - - - - - coiled-coil domain containing 30, transcript variant X4
19. MMEL1 ENSGALG00000001115 46 0.881 - - - 0.881 - - - - - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
20. SOX2 ENSGALG00000043460 6 0.834 - - - 0.834 - - - - - - SRY-box 2 [Source:NCBI gene;Acc:396105]
21. KCNRG ENSGALG00000017012 4 0.834 - - - 0.834 - - - - - - potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
22. ABHD3 ENSGALG00000014938 9 0.834 - - - 0.834 - - - - - - abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
23. FLT4 ENSGALG00000005802 5 0.834 - - - 0.834 - - - - - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
24. DES ENSGALG00000011306 16 0.834 - - - 0.834 - - - - - - desmin [Source:HGNC Symbol;Acc:HGNC:2770]
25. NHSL1 ENSGALG00000026981 11 0.834 - - - 0.834 - - - - - - NHS like 1 [Source:HGNC Symbol;Acc:HGNC:21021]
26. ENSGALG00000016269 ENSGALG00000016269 3 0.834 - - - 0.834 - - - - - -
27. RNF180 ENSGALG00000014743 3 0.834 - - - 0.834 - - - - - - ring finger protein 180 [Source:HGNC Symbol;Acc:HGNC:27752]
28. SLC6A6 ENSGALG00000006425 31 0.834 - - - 0.834 - - - - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
29. PRG4 3 0.834 - - - 0.834 - - - - - - proteoglycan 4
30. HELB ENSGALG00000009885 8 0.834 - - - 0.834 - - - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
31. HOXA11 ENSGALG00000040021 3 0.834 - - - 0.834 - - - - - - homeobox A11 [Source:NCBI gene;Acc:395327]
32. ENSGALG00000025985 ENSGALG00000025985 1 0.834 - - - 0.834 - - - - - -
33. GPR156 ENSGALG00000014973 4 0.834 - - - 0.834 - - - - - - G protein-coupled receptor 156, transcript variant X4
34. ENSGALG00000005482 ENSGALG00000005482 1 0.834 - - - 0.834 - - - - - -
35. CMYA5 16 0.834 - - - 0.834 - - - - - - cardiomyopathy associated 5
36. CALB1 ENSGALG00000032282 16 0.834 - - - 0.834 - - - - - - calbindin 1 [Source:NCBI gene;Acc:396519]
37. PP2D1 ENSGALG00000044362 2 0.834 - - - 0.834 - - - - - - protein phosphatase 2C like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28406]
38. gga-let-7i ENSGALG00000018237 2 0.834 - - - 0.834 - - - - - - gga-let-7i [Source:miRBase;Acc:MI0001168]
39. IRX6 ENSGALG00000023738 2 0.789 - - 0.789 - - - - - - - iroquois homeobox 6 [Source:HGNC Symbol;Acc:HGNC:14675]
40. SGK2 ENSGALG00000003537 26 0.787 - - - - - 0.787 - - - - SGK2, serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:13900]
41. CPN2 ENSGALG00000045776 18 0.781 - - 0.781 - - - - - - - carboxypeptidase N subunit 2
42. GRIA4 ENSGALG00000038995 29 0.781 - - 0.781 - - - - - - - glutamate ionotropic receptor AMPA type subunit 4 [Source:NCBI gene;Acc:396137]
43. CNGB3 ENSGALG00000037644 1 0.771 - - - 0.771 - - - - - - cyclic nucleotide gated channel beta 3 [Source:HGNC Symbol;Acc:HGNC:2153]
44. ENSGALG00000009485 ENSGALG00000009485 4 0.769 - - - 0.769 - - - - - -
45. NOG ENSGALG00000003114 12 0.735 - - - - - 0.735 - - - - noggin [Source:NCBI gene;Acc:373912]
46. B3GNT7 ENSGALG00000007701 929 0.732 - - - 0.732 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
47. ENSGALG00000011933 ENSGALG00000011933 1 0.732 - - 0.732 - - - - - - -
48. ENSGALG00000020779 ENSGALG00000020779 19 0.732 - - 0.732 - - - - - - -
49. LIG4 ENSGALG00000016854 162 0.727 - - - - - 0.727 - - - - DNA ligase 4 [Source:NCBI gene;Acc:418764]
50. DDB1 ENSGALG00000042333 275 0.725 - - 0.725 - - - - - - - damage specific DNA binding protein 1 [Source:NCBI gene;Acc:374050]
51. RNF6 ENSGALG00000017105 11 0.714 - - - 0.714 - - - - - - ring finger protein 6 [Source:HGNC Symbol;Acc:HGNC:10069]
52. CRY1 ENSGALG00000012638 2464 0.711 - - - - - 0.711 - - - - cryptochrome circadian regulator 1 [Source:NCBI gene;Acc:374093]
53. CCDC92 ENSGALG00000003146 40 0.709 - - - - - - - - - 0.709 coiled-coil domain containing 92 [Source:HGNC Symbol;Acc:HGNC:29563]
54. KIAA2013 ENSGALG00000004533 8 0.707 - - - 0.707 - - - - - - KIAA2013 [Source:HGNC Symbol;Acc:HGNC:28513]
55. ENSGALG00000023265 ENSGALG00000023265 4 0.707 - - - 0.707 - - - - - -
56. PARM1 ENSGALG00000010268 13 0.706 - - 0.706 - - - - - - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
57. C3orf83 C3orf83 117 0.705 - - - - - - - - - 0.705
58. SERINC4 ENSGALG00000042029 21 0.704 - - - - - 0.704 - - - - serine incorporator 4 [Source:HGNC Symbol;Acc:HGNC:32237]
59. HIF1AN ENSGALG00000005698 1996 0.704 - - - - - 0.704 - - - - hypoxia inducible factor 1 subunit alpha inhibitor [Source:HGNC Symbol;Acc:HGNC:17113]
60. HOXD8 ENSGALG00000037272 4338 0.7 - - 0.700 - - - - - - - homeobox D8 [Source:NCBI gene;Acc:396301]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA