Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Defb42

Gene Name Gene ID Reads Annotation
Defb42 ENSMUSG00000054763 274 defensin beta 42 [Source:MGI Symbol;Acc:MGI:3033850]







Genes with expression patterns similar to Defb42

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Defb42 ENSMUSG00000054763 274 6 1.000 1.000 1.000 1.000 1.000 1.000 defensin beta 42 [Source:MGI Symbol;Acc:MGI:3033850]
2. Hspa1a ENSMUSG00000091971 39 1.489 - - 0.756 - 0.733 - heat shock protein 1A [Source:MGI Symbol;Acc:MGI:96244]
3. 4833418N02Rik ENSMUSG00000085287 88 0.983 - 0.983 - - - - RIKEN cDNA 4833418N02 gene [Source:MGI Symbol;Acc:MGI:1921847]
4. Myocd ENSMUSG00000020542 95 0.981 - 0.981 - - - - myocardin [Source:MGI Symbol;Acc:MGI:2137495]
5. Ppapdc3 Ppapdc3 168 0.98 - 0.980 - - - -
6. Gm12166 ENSMUSG00000069899 88 0.98 - 0.980 - - - - predicted gene 12166 [Source:MGI Symbol;Acc:MGI:3650635]
7. Lgals4 ENSMUSG00000053964 72 0.979 - 0.979 - - - - lectin, galactose binding, soluble 4 [Source:MGI Symbol;Acc:MGI:107536]
8. Gm26660 ENSMUSG00000097601 53 0.979 - 0.979 - - - - predicted gene, 26660 [Source:MGI Symbol;Acc:MGI:5477154]
9. Riiad1 ENSMUSG00000028139 70 0.979 - 0.979 - - - - regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 [Source:MGI Symbol;Acc:MGI:1913603]
10. Hspa2 ENSMUSG00000059970 134 0.979 - 0.979 - - - - heat shock protein 2 [Source:MGI Symbol;Acc:MGI:96243]
11. Alas2 ENSMUSG00000025270 51 0.979 - 0.979 - - - - aminolevulinic acid synthase 2, erythroid [Source:MGI Symbol;Acc:MGI:87990]
12. Syt6 ENSMUSG00000027849 95 0.978 - 0.978 - - - - synaptotagmin VI [Source:MGI Symbol;Acc:MGI:1859544]
13. Ccl9 ENSMUSG00000019122 84 0.978 - 0.978 - - - - chemokine (C-C motif) ligand 9 [Source:MGI Symbol;Acc:MGI:104533]
14. Fam115c Fam115c 138 0.977 - 0.977 - - - -
15. Airn ENSMUSG00000078247 868 0.976 - 0.976 - - - - antisense Igf2r RNA [Source:MGI Symbol;Acc:MGI:1353471]
16. Gm5560 ENSMUSG00000067161 131 0.976 - 0.976 - - - - predicted pseudogene 5560 [Source:MGI Symbol;Acc:MGI:3647980]
17. 4930579G24Rik ENSMUSG00000027811 253 0.975 - 0.975 - - - - RIKEN cDNA 4930579G24 gene [Source:MGI Symbol;Acc:MGI:1923189]
18. Mir1983 ENSMUSG00000088148 63 0.975 - 0.975 - - - - microRNA 1983 [Source:MGI Symbol;Acc:MGI:3837223]
19. Cnr1 ENSMUSG00000044288 299 0.974 - 0.974 - - - - cannabinoid receptor 1 (brain) [Source:MGI Symbol;Acc:MGI:104615]
20. 4921530L18Rik 4921530L18Rik 134 0.972 - 0.972 - - - -
21. Tmem181a ENSMUSG00000038141 197 0.972 - 0.972 - - - - transmembrane protein 181A [Source:MGI Symbol;Acc:MGI:1924356]
22. Paxbp1 ENSMUSG00000022974 322 0.971 - 0.971 - - - - PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
23. Gm15542 ENSMUSG00000083396 259 0.97 - 0.970 - - - - predicted gene 15542 [Source:MGI Symbol;Acc:MGI:3782990]
24. Dnajc1 ENSMUSG00000026740 1120 0.97 - 0.970 - - - - DnaJ heat shock protein family (Hsp40) member C1 [Source:MGI Symbol;Acc:MGI:103268]
25. Dnajc27 ENSMUSG00000020657 686 0.969 - 0.969 - - - - DnaJ heat shock protein family (Hsp40) member C27 [Source:MGI Symbol;Acc:MGI:2443036]
26. 2410016O06Rik 799 0.969 - 0.969 - - - - RIKEN cDNA 2410016O06 gene
27. Prkar1b ENSMUSG00000025855 360 0.968 - 0.968 - - - - protein kinase, cAMP dependent regulatory, type I beta [Source:MGI Symbol;Acc:MGI:97759]
28. Slc7a14 ENSMUSG00000069072 717 0.967 - 0.967 - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 [Source:MGI Symbol;Acc:MGI:3040688]
29. Scfd2 ENSMUSG00000062110 241 0.967 - 0.967 - - - - Sec1 family domain containing 2 [Source:MGI Symbol;Acc:MGI:2443446]
30. Cobl ENSMUSG00000020173 269 0.967 - 0.967 - - - - cordon-bleu WH2 repeat [Source:MGI Symbol;Acc:MGI:105056]
31. S100a13 ENSMUSG00000042312 218 0.967 - 0.967 - - - - S100 calcium binding protein A13 [Source:MGI Symbol;Acc:MGI:109581]
32. Stom ENSMUSG00000026880 646 0.966 - 0.966 - - - - stomatin [Source:MGI Symbol;Acc:MGI:95403]
33. Robo2 ENSMUSG00000052516 1177 0.965 - 0.965 - - - - roundabout guidance receptor 2 [Source:MGI Symbol;Acc:MGI:1890110]
34. Espl1 ENSMUSG00000058290 1337 0.964 - 0.964 - - - - extra spindle pole bodies 1, separase [Source:MGI Symbol;Acc:MGI:2146156]
35. Gm21781 ENSMUSG00000095123 261 0.963 - 0.963 - - - - predicted gene, 21781 [Source:MGI Symbol;Acc:MGI:5433945]
36. Mertk ENSMUSG00000014361 329 0.963 - 0.963 - - - - c-mer proto-oncogene tyrosine kinase [Source:MGI Symbol;Acc:MGI:96965]
37. Synpo2 ENSMUSG00000050315 250 0.963 - 0.963 - - - - synaptopodin 2 [Source:MGI Symbol;Acc:MGI:2153070]
38. Prkag2 ENSMUSG00000028944 521 0.962 - 0.962 - - - - protein kinase, AMP-activated, gamma 2 non-catalytic subunit [Source:MGI Symbol;Acc:MGI:1336153]
39. Hecw2 ENSMUSG00000042807 346 0.962 - 0.962 - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:2685817]
40. Ptplad2 Ptplad2 382 0.961 - 0.961 - - - -
41. Cdpf1 ENSMUSG00000064284 245 0.961 - 0.961 - - - - cysteine rich, DPF motif domain containing 1 [Source:MGI Symbol;Acc:MGI:1919605]
42. Tecpr1 ENSMUSG00000066621 1296 0.96 - 0.960 - - - - tectonin beta-propeller repeat containing 1 [Source:MGI Symbol;Acc:MGI:1917631]
43. Cd99l2 ENSMUSG00000035776 1089 0.959 - 0.959 - - - - CD99 antigen-like 2 [Source:MGI Symbol;Acc:MGI:2177151]
44. Grin3a ENSMUSG00000039579 433 0.959 - 0.959 - - - - glutamate receptor ionotropic, NMDA3A [Source:MGI Symbol;Acc:MGI:1933206]
45. Pex10 ENSMUSG00000029047 243 0.958 - 0.958 - - - - peroxisomal biogenesis factor 10 [Source:MGI Symbol;Acc:MGI:2684988]
46. Lrch1 ENSMUSG00000068015 520 0.958 - 0.958 - - - - leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:MGI Symbol;Acc:MGI:2443390]
47. Prdm16 ENSMUSG00000039410 833 0.957 - 0.957 - - - - PR domain containing 16 [Source:MGI Symbol;Acc:MGI:1917923]
48. Gm10722 ENSMUSG00000091028 539 0.957 - 0.957 - - - - predicted gene 10722 [Source:MGI Symbol;Acc:MGI:3642024]
49. 8430419L09Rik 8430419L09Rik 409 0.955 - 0.955 - - - -
50. Hif3a ENSMUSG00000004328 436 0.955 - 0.955 - - - - hypoxia inducible factor 3, alpha subunit [Source:MGI Symbol;Acc:MGI:1859778]
51. Ccne2 ENSMUSG00000028212 419 0.955 - 0.955 - - - - cyclin E2 [Source:MGI Symbol;Acc:MGI:1329034]
52. Wscd1 ENSMUSG00000020811 318 0.954 - 0.954 - - - - WSC domain containing 1 [Source:MGI Symbol;Acc:MGI:2448493]
53. Fanci ENSMUSG00000039187 478 0.953 - 0.953 - - - - Fanconi anemia, complementation group I [Source:MGI Symbol;Acc:MGI:2384790]
54. C920011F04Rik C920011F04Rik 362 0.953 - 0.953 - - - -
55. Dennd6b ENSMUSG00000015377 391 0.952 - 0.952 - - - - DENN/MADD domain containing 6B [Source:MGI Symbol;Acc:MGI:1916690]
56. Prkcd ENSMUSG00000021948 898 0.949 - 0.949 - - - - protein kinase C, delta [Source:MGI Symbol;Acc:MGI:97598]
57. Gm15823 ENSMUSG00000081143 242 0.949 - 0.949 - - - - predicted gene 15823 [Source:MGI Symbol;Acc:MGI:3801858]
58. Ccdc120 ENSMUSG00000031150 486 0.948 - 0.948 - - - - coiled-coil domain containing 120 [Source:MGI Symbol;Acc:MGI:1859619]
59. Zfp599 ENSMUSG00000062794 354 0.947 - 0.947 - - - - zinc finger protein 599 [Source:MGI Symbol;Acc:MGI:2679006]
60. Cd2ap ENSMUSG00000061665 3556 0.946 - 0.946 - - - - CD2-associated protein [Source:MGI Symbol;Acc:MGI:1330281]
61. Adarb2 ENSMUSG00000052551 671 0.945 - 0.945 - - - - adenosine deaminase, RNA-specific, B2 [Source:MGI Symbol;Acc:MGI:2151118]
62. Afap1l1 ENSMUSG00000033032 472 0.944 - 0.944 - - - - actin filament associated protein 1-like 1 [Source:MGI Symbol;Acc:MGI:2147199]
63. Rpl22-ps1 ENSMUSG00000080877 368 0.943 - 0.943 - - - - ribosomal protein L22, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644276]
64. 6820431F20Rik ENSMUSG00000071796 1045 0.942 - 0.942 - - - - RIKEN cDNA 6820431F20 gene [Source:MGI Symbol;Acc:MGI:3694236]
65. Chchd6 ENSMUSG00000030086 835 0.94 - 0.940 - - - - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:MGI Symbol;Acc:MGI:1913348]
66. Zfp788 ENSMUSG00000074165 612 0.939 - 0.939 - - - - zinc finger protein 788 [Source:MGI Symbol;Acc:MGI:1914857]
67. Casp9 ENSMUSG00000028914 1554 0.939 - 0.939 - - - - caspase 9 [Source:MGI Symbol;Acc:MGI:1277950]
68. Exoc8 ENSMUSG00000074030 1106 0.938 - 0.938 - - - - exocyst complex component 8 [Source:MGI Symbol;Acc:MGI:2142527]
69. Arl16 ENSMUSG00000057594 663 0.938 - 0.938 - - - - ADP-ribosylation factor-like 16 [Source:MGI Symbol;Acc:MGI:1917567]
70. Lmnb1 ENSMUSG00000024590 2867 0.938 - 0.938 - - - - lamin B1 [Source:MGI Symbol;Acc:MGI:96795]
71. Ncs1 ENSMUSG00000062661 1121 0.938 - 0.938 - - - - neuronal calcium sensor 1 [Source:MGI Symbol;Acc:MGI:109166]
72. Fam69b ENSMUSG00000036186 667 0.937 - 0.937 - - - - family with sequence similarity 69, member B [Source:MGI Symbol;Acc:MGI:1927576]
73. Atg4a ENSMUSG00000079418, ENSMUSG00000116318 359 0.937 - 0.937 - - - - autophagy related 4A, cysteine peptidase [Source:MGI Symbol;Acc:MGI:2147903]
74. BC018242 BC018242 311 0.936 - 0.936 - - - -
75. Trak1 ENSMUSG00000032536 705 0.935 - 0.935 - - - - trafficking protein, kinesin binding 1 [Source:MGI Symbol;Acc:MGI:1914345]
76. Fra10ac1 ENSMUSG00000054237 851 0.933 - 0.933 - - - - FRA10AC1 homolog (human) [Source:MGI Symbol;Acc:MGI:1917817]
77. Gm21917 ENSMUSG00000096111 466 0.933 - 0.933 - - - - predicted gene, 21917 [Source:MGI Symbol;Acc:MGI:5434081]
78. Osbpl3 ENSMUSG00000029822 569 0.932 - 0.932 - - - - oxysterol binding protein-like 3 [Source:MGI Symbol;Acc:MGI:1918970]
79. Zfyve16 ENSMUSG00000021706 747 0.932 - 0.932 - - - - zinc finger, FYVE domain containing 16 [Source:MGI Symbol;Acc:MGI:2145181]
80. Smim11 ENSMUSG00000051989 1776 0.931 - 0.931 - - - - small integral membrane protein 11 [Source:MGI Symbol;Acc:MGI:1916186]
81. D10Jhu81e ENSMUSG00000053329 634 0.931 - 0.931 - - - - DNA segment, Chr 10, Johns Hopkins University 81 expressed [Source:MGI Symbol;Acc:MGI:1351861]
82. Brf2 ENSMUSG00000031487 512 0.929 - 0.929 - - - - BRF2, RNA polymerase III transcription initiation factor 50kDa subunit [Source:MGI Symbol;Acc:MGI:1913903]
83. Ppp1r12a ENSMUSG00000019907 2010 0.929 - 0.929 - - - - protein phosphatase 1, regulatory subunit 12A [Source:MGI Symbol;Acc:MGI:1309528]
84. Rpp25l ENSMUSG00000036114 1760 0.928 - 0.928 - - - - ribonuclease P/MRP 25 subunit-like [Source:MGI Symbol;Acc:MGI:1917211]
85. Spin2c ENSMUSG00000046550 850 0.928 - 0.928 - - - - spindlin family, member 2C [Source:MGI Symbol;Acc:MGI:3605548]
86. Polr1e ENSMUSG00000028318 703 0.927 - 0.927 - - - - polymerase (RNA) I polypeptide E [Source:MGI Symbol;Acc:MGI:1929022]
87. Zbtb8a ENSMUSG00000028807 233 0.925 - 0.925 - - - - zinc finger and BTB domain containing 8a [Source:MGI Symbol;Acc:MGI:1920930]
88. Rhbdd3 ENSMUSG00000034175 497 0.924 - 0.924 - - - - rhomboid domain containing 3 [Source:MGI Symbol;Acc:MGI:2444684]
89. Numa1 ENSMUSG00000066306 1150 0.924 - 0.924 - - - - nuclear mitotic apparatus protein 1 [Source:MGI Symbol;Acc:MGI:2443665]
90. Flywch2 ENSMUSG00000023911 364 0.922 - 0.922 - - - - FLYWCH family member 2 [Source:MGI Symbol;Acc:MGI:1924167]
91. Rsbn1 ENSMUSG00000044098 1083 0.921 - 0.921 - - - - rosbin, round spermatid basic protein 1 [Source:MGI Symbol;Acc:MGI:2444993]
92. Mir3091 ENSMUSG00000092827 755 0.921 - 0.921 - - - - microRNA 3091 [Source:MGI Symbol;Acc:MGI:4834305]
93. Zadh2 ENSMUSG00000049090 1018 0.921 - 0.921 - - - - zinc binding alcohol dehydrogenase, domain containing 2 [Source:MGI Symbol;Acc:MGI:2444835]
94. Ncdn ENSMUSG00000028833 1971 0.921 - 0.921 - - - - neurochondrin [Source:MGI Symbol;Acc:MGI:1347351]
95. Slc12a9 ENSMUSG00000037344 666 0.921 - 0.921 - - - - solute carrier family 12 (potassium/chloride transporters), member 9 [Source:MGI Symbol;Acc:MGI:1933532]
96. Ankle1 ENSMUSG00000046295 532 0.921 - 0.921 - - - - ankyrin repeat and LEM domain containing 1 [Source:MGI Symbol;Acc:MGI:1918775]
97. Bicd2 ENSMUSG00000037933 784 0.92 - 0.920 - - - - BICD cargo adaptor 2 [Source:MGI Symbol;Acc:MGI:1924145]
98. Stx17 ENSMUSG00000061455 814 0.92 - 0.920 - - - - syntaxin 17 [Source:MGI Symbol;Acc:MGI:1914977]
99. Zfp385a ENSMUSG00000000552 2121 0.919 - 0.919 - - - - zinc finger protein 385A [Source:MGI Symbol;Acc:MGI:1352495]
100. Tmem205 ENSMUSG00000040883 373 0.918 - 0.918 - - - - transmembrane protein 205 [Source:MGI Symbol;Acc:MGI:3045495]

There are 323 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA