Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ddx56

Gene Name Gene ID Reads Annotation
Ddx56 ENSMUSG00000004393 862 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 [Source:MGI Symbol;Acc:MGI:1277172]







Genes with expression patterns similar to Ddx56

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ddx56 ENSMUSG00000004393 862 6 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 [Source:MGI Symbol;Acc:MGI:1277172]
2. Bpnt1 ENSMUSG00000026617 587 0.864 0.864 - - - - - bisphosphate 3'-nucleotidase 1 [Source:MGI Symbol;Acc:MGI:1338800]
3. Hykk ENSMUSG00000035878 741 0.855 0.855 - - - - - hydroxylysine kinase 1 [Source:MGI Symbol;Acc:MGI:2443139]
4. Cog2 ENSMUSG00000031979 839 0.85 0.850 - - - - - component of oligomeric golgi complex 2 [Source:MGI Symbol;Acc:MGI:1923582]
5. Zmym6 ENSMUSG00000042408 218 0.849 0.849 - - - - - zinc finger, MYM-type 6 [Source:MGI Symbol;Acc:MGI:106505]
6. 5031439G07Rik ENSMUSG00000036046 1470 0.849 0.849 - - - - - RIKEN cDNA 5031439G07 gene [Source:MGI Symbol;Acc:MGI:2444899]
7. Mpi ENSMUSG00000032306 504 0.847 0.847 - - - - - mannose phosphate isomerase [Source:MGI Symbol;Acc:MGI:97075]
8. Casp7 ENSMUSG00000025076 762 0.846 0.846 - - - - - caspase 7 [Source:MGI Symbol;Acc:MGI:109383]
9. Noc4l ENSMUSG00000033294 1555 0.84 0.840 - - - - - NOC4 like [Source:MGI Symbol;Acc:MGI:2140843]
10. Trmt11 ENSMUSG00000019792 1182 0.84 0.840 - - - - - tRNA methyltransferase 11 [Source:MGI Symbol;Acc:MGI:1920931]
11. Uggt1 ENSMUSG00000037470 1598 0.839 0.839 - - - - - UDP-glucose glycoprotein glucosyltransferase 1 [Source:MGI Symbol;Acc:MGI:2443162]
12. Fbxl7 ENSMUSG00000043556 38 0.839 0.839 - - - - - F-box and leucine-rich repeat protein 7 [Source:MGI Symbol;Acc:MGI:3052506]
13. Pik3c2b ENSMUSG00000026447 424 0.837 0.837 - - - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:MGI Symbol;Acc:MGI:2685045]
14. Rpl7a ENSMUSG00000062647 988 0.837 0.837 - - - - - ribosomal protein L7A [Source:MGI Symbol;Acc:MGI:1353472]
15. Gm5844 ENSMUSG00000082896 73 0.832 0.832 - - - - - predicted gene 5844 [Source:MGI Symbol;Acc:MGI:3645252]
16. Rbfa ENSMUSG00000024570 458 0.832 0.832 - - - - - ribosome binding factor A [Source:MGI Symbol;Acc:MGI:1915981]
17. Wsb2 ENSMUSG00000029364 343 0.832 0.832 - - - - - WD repeat and SOCS box-containing 2 [Source:MGI Symbol;Acc:MGI:2144041]
18. Shc2 ENSMUSG00000020312 611 0.831 0.831 - - - - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:MGI Symbol;Acc:MGI:106180]
19. Letm1 ENSMUSG00000005299 1677 0.831 0.831 - - - - - leucine zipper-EF-hand containing transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1932557]
20. Hif3a ENSMUSG00000004328 436 0.831 0.831 - - - - - hypoxia inducible factor 3, alpha subunit [Source:MGI Symbol;Acc:MGI:1859778]
21. Gm13483 ENSMUSG00000085862 112 0.827 0.827 - - - - - predicted gene 13483 [Source:MGI Symbol;Acc:MGI:3651423]
22. Zfp658 ENSMUSG00000056592 193 0.826 0.826 - - - - - zinc finger protein 658 [Source:MGI Symbol;Acc:MGI:2652821]
23. Tmem143 ENSMUSG00000002781 172 0.826 0.826 - - - - - transmembrane protein 143 [Source:MGI Symbol;Acc:MGI:1917459]
24. Zfp82 ENSMUSG00000098022 62 0.825 0.825 - - - - - zinc finger protein 82 [Source:MGI Symbol;Acc:MGI:1890753]
25. Creb5 ENSMUSG00000053007 139 0.824 0.824 - - - - - cAMP responsive element binding protein 5 [Source:MGI Symbol;Acc:MGI:2443973]
26. Dnph1 ENSMUSG00000040658 1380 0.824 0.824 - - - - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:MGI Symbol;Acc:MGI:3039376]
27. Kbtbd4 ENSMUSG00000005505, ENSMUSG00000111688 58 0.824 0.824 - - - - - kelch repeat and BTB (POZ) domain containing 4 [Source:MGI Symbol;Acc:MGI:1914386]
28. Zfp879 ENSMUSG00000044296 77 0.823 0.823 - - - - - zinc finger protein 879 [Source:MGI Symbol;Acc:MGI:3053099]
29. 9130204K15Rik ENSMUSG00000086474 123 0.823 0.823 - - - - - RIKEN cDNA 9130204K15 gene [Source:MGI Symbol;Acc:MGI:2441733]
30. Gm20390 ENSMUSG00000091228 128 0.822 0.822 - - - - - predicted gene 20390 [Source:MGI Symbol;Acc:MGI:5141855]
31. Hist1h3e ENSMUSG00000069273 80 0.822 0.822 - - - - - histone cluster 1, H3e [Source:MGI Symbol;Acc:MGI:2448326]
32. Ypel3 ENSMUSG00000042675 3138 0.82 0.820 - - - - - yippee like 3 [Source:MGI Symbol;Acc:MGI:1913340]
33. Ada ENSMUSG00000017697 150 0.82 0.820 - - - - - adenosine deaminase [Source:MGI Symbol;Acc:MGI:87916]
34. Elmo1 ENSMUSG00000041112 427 0.82 0.820 - - - - - engulfment and cell motility 1 [Source:MGI Symbol;Acc:MGI:2153044]
35. Nek8 ENSMUSG00000017405 252 0.819 0.819 - - - - - NIMA (never in mitosis gene a)-related expressed kinase 8 [Source:MGI Symbol;Acc:MGI:1890646]
36. Rprd1b ENSMUSG00000027651 1580 0.818 0.818 - - - - - regulation of nuclear pre-mRNA domain containing 1B [Source:MGI Symbol;Acc:MGI:1917720]
37. Gm6900 ENSMUSG00000093826 302 0.818 0.818 - - - - - predicted gene 6900 [Source:MGI Symbol;Acc:MGI:3645052]
38. Cmss1 ENSMUSG00000022748 105 0.818 0.818 - - - - - cms small ribosomal subunit 1 [Source:MGI Symbol;Acc:MGI:1913747]
39. Slc7a14 ENSMUSG00000069072 717 0.818 0.818 - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 [Source:MGI Symbol;Acc:MGI:3040688]
40. Pign ENSMUSG00000056536 715 0.817 0.817 - - - - - phosphatidylinositol glycan anchor biosynthesis, class N [Source:MGI Symbol;Acc:MGI:1351629]
41. Ccl27a ENSMUSG00000073888, ENSMUSG00000093828, ENSMUSG00000095247 262 0.816 0.816 - - - - - chemokine (C-C motif) ligand 27A [Source:MGI Symbol;Acc:MGI:1343459]
42. Dgkk ENSMUSG00000062393, ENSMUSG00000116051 264 0.815 0.815 - - - - - diacylglycerol kinase kappa [Source:MGI Symbol;Acc:MGI:3580254]
43. Plcg1 ENSMUSG00000016933 2046 0.814 0.814 - - - - - phospholipase C, gamma 1 [Source:MGI Symbol;Acc:MGI:97615]
44. Tuft1 ENSMUSG00000005968 166 0.814 0.814 - - - - - tuftelin 1 [Source:MGI Symbol;Acc:MGI:109572]
45. Lefty2 ENSMUSG00000066652 109 0.814 0.814 - - - - - left-right determination factor 2 [Source:MGI Symbol;Acc:MGI:2443573]
46. Dnpep ENSMUSG00000026209 1821 0.813 0.813 - - - - - aspartyl aminopeptidase [Source:MGI Symbol;Acc:MGI:1278328]
47. 2210404O09Rik 315 0.813 0.813 - - - - - RIKEN cDNA 2210404O09 gene
48. Fam63b 453 0.81 0.810 - - - - - family with sequence similarity 63, member B, transcript variant X7
49. Zfp2 ENSMUSG00000049321 376 0.81 0.810 - - - - - zinc finger protein 2 [Source:MGI Symbol;Acc:MGI:99167]
50. E130309D02Rik ENSMUSG00000039244 390 0.81 0.810 - - - - - RIKEN cDNA E130309D02 gene [Source:MGI Symbol;Acc:MGI:2442621]
51. Slc29a3 ENSMUSG00000020100 303 0.809 0.809 - - - - - solute carrier family 29 (nucleoside transporters), member 3 [Source:MGI Symbol;Acc:MGI:1918529]
52. 6720427I07Rik ENSMUSG00000097375 220 0.809 0.809 - - - - - RIKEN cDNA 6720427I07 gene [Source:MGI Symbol;Acc:MGI:1924398]
53. Dip2a ENSMUSG00000020231 649 0.808 0.808 - - - - - disco interacting protein 2 homolog A [Source:MGI Symbol;Acc:MGI:2385920]
54. C030046E11Rik C030046E11Rik 1079 0.808 0.808 - - - - -
55. Mfsd5 ENSMUSG00000045665 541 0.808 0.808 - - - - - major facilitator superfamily domain containing 5 [Source:MGI Symbol;Acc:MGI:2145901]
56. Hist1h2al ENSMUSG00000091383 379 0.808 0.808 - - - - - histone cluster 1, H2al [Source:MGI Symbol;Acc:MGI:3646032]
57. Ntf3 ENSMUSG00000049107 436 0.808 0.808 - - - - - neurotrophin 3 [Source:MGI Symbol;Acc:MGI:97380]
58. Trappc2 ENSMUSG00000079317 429 0.807 0.807 - - - - - trafficking protein particle complex 2 [Source:MGI Symbol;Acc:MGI:1913476]
59. Wnt3 ENSMUSG00000000125 142 0.807 0.807 - - - - - wingless-type MMTV integration site family, member 3 [Source:MGI Symbol;Acc:MGI:98955]
60. 2310002L09Rik ENSMUSG00000028396 135 0.807 0.807 - - - - - RIKEN cDNA 2310002L09 gene [Source:MGI Symbol;Acc:MGI:1916780]
61. Alms1 ENSMUSG00000063810 392 0.807 0.807 - - - - - ALMS1, centrosome and basal body associated [Source:MGI Symbol;Acc:MGI:1934606]
62. Lrrc8d ENSMUSG00000046079 806 0.807 0.807 - - - - - leucine rich repeat containing 8D [Source:MGI Symbol;Acc:MGI:1922368]
63. Gfra3 ENSMUSG00000024366 197 0.806 0.806 - - - - - glial cell line derived neurotrophic factor family receptor alpha 3 [Source:MGI Symbol;Acc:MGI:1201403]
64. Anxa3 ENSMUSG00000029484 1114 0.806 0.806 - - - - - annexin A3 [Source:MGI Symbol;Acc:MGI:1201378]
65. Gmppa ENSMUSG00000033021 462 0.805 0.805 - - - - - GDP-mannose pyrophosphorylase A [Source:MGI Symbol;Acc:MGI:1916330]
66. Nbas ENSMUSG00000020576 308 0.804 0.804 - - - - - neuroblastoma amplified sequence [Source:MGI Symbol;Acc:MGI:1918419]
67. Rnf121 ENSMUSG00000070426 743 0.803 0.803 - - - - - ring finger protein 121 [Source:MGI Symbol;Acc:MGI:1922462]
68. Haus1 ENSMUSG00000041840, ENSMUSG00000115884 877 0.801 0.801 - - - - - HAUS augmin-like complex, subunit 1 [Source:MGI Symbol;Acc:MGI:2385076]
69. 4933427D14Rik ENSMUSG00000020807 602 0.801 0.801 - - - - - RIKEN cDNA 4933427D14 gene [Source:MGI Symbol;Acc:MGI:1921727]
70. Cpeb2 ENSMUSG00000039782 373 0.8 0.800 - - - - - cytoplasmic polyadenylation element binding protein 2 [Source:MGI Symbol;Acc:MGI:2442640]
71. Rnf113a2 ENSMUSG00000098134 455 0.8 0.800 - - - - - ring finger protein 113A2 [Source:MGI Symbol;Acc:MGI:1913631]
72. Pdpn ENSMUSG00000028583, ENSMUSG00000096951 1719 0.799 0.799 - - - - - podoplanin [Source:MGI Symbol;Acc:MGI:103098]
73. C330018D20Rik ENSMUSG00000024592 624 0.799 0.799 - - - - - RIKEN cDNA C330018D20 gene [Source:MGI Symbol;Acc:MGI:1924672]
74. Rars2 ENSMUSG00000028292 1107 0.798 0.798 - - - - - arginyl-tRNA synthetase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1923596]
75. Nipa2 ENSMUSG00000030452 1620 0.798 0.798 - - - - - non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human) [Source:MGI Symbol;Acc:MGI:1913918]
76. Plag1 ENSMUSG00000003282 109 0.797 0.797 - - - - - pleiomorphic adenoma gene 1 [Source:MGI Symbol;Acc:MGI:1891916]
77. Stat2 ENSMUSG00000040033 489 0.796 0.796 - - - - - signal transducer and activator of transcription 2 [Source:MGI Symbol;Acc:MGI:103039]
78. B3gnt1 B3gnt1 474 0.795 0.795 - - - - -
79. Emp1 ENSMUSG00000030208 579 0.794 0.794 - - - - - epithelial membrane protein 1 [Source:MGI Symbol;Acc:MGI:107941]
80. Cmc1 ENSMUSG00000039163 767 0.793 0.793 - - - - - COX assembly mitochondrial protein 1 [Source:MGI Symbol;Acc:MGI:1915149]
81. Gm3550 ENSMUSG00000078240 469 0.793 0.793 - - - - - predicted gene 3550 [Source:MGI Symbol;Acc:MGI:3781727]
82. Slc39a3 ENSMUSG00000046822 344 0.793 0.793 - - - - - solute carrier family 39 (zinc transporter), member 3 [Source:MGI Symbol;Acc:MGI:2147269]
83. Selenbp1 ENSMUSG00000068874 170 0.792 0.792 - - - - - selenium binding protein 1 [Source:MGI Symbol;Acc:MGI:96825]
84. Iqgap3 ENSMUSG00000028068 2085 0.792 - 0.792 - - - - IQ motif containing GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:3028642]
85. 9230114K14Rik ENSMUSG00000097145 271 0.791 0.791 - - - - - RIKEN cDNA 9230114K14 gene [Source:MGI Symbol;Acc:MGI:3041212]
86. Tbl3 ENSMUSG00000040688 1374 0.79 0.790 - - - - - transducin (beta)-like 3 [Source:MGI Symbol;Acc:MGI:2384863]
87. Ubtd2 ENSMUSG00000044949 364 0.79 0.790 - - - - - ubiquitin domain containing 2 [Source:MGI Symbol;Acc:MGI:2444752]
88. Erbb2 ENSMUSG00000062312 422 0.789 0.789 - - - - - erb-b2 receptor tyrosine kinase 2 [Source:MGI Symbol;Acc:MGI:95410]
89. Adprhl2 ENSMUSG00000042558 1826 0.789 0.789 - - - - - ADP-ribosylhydrolase like 2 [Source:MGI Symbol;Acc:MGI:2140364]
90. Tnks ENSMUSG00000031529 334 0.788 0.788 - - - - - tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase [Source:MGI Symbol;Acc:MGI:1341087]
91. Dis3 ENSMUSG00000033166 1478 0.788 0.788 - - - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:MGI Symbol;Acc:MGI:1919912]
92. Gm14780 ENSMUSG00000083207 142 0.787 0.787 - - - - - predicted gene 14780 [Source:MGI Symbol;Acc:MGI:3705499]
93. Arhgef5 ENSMUSG00000033542 514 0.787 0.787 - - - - - Rho guanine nucleotide exchange factor (GEF) 5 [Source:MGI Symbol;Acc:MGI:1858952]
94. Fbxo31 ENSMUSG00000052934 371 0.786 0.786 - - - - - F-box protein 31 [Source:MGI Symbol;Acc:MGI:1354708]
95. Pdcd6 ENSMUSG00000021576 2269 0.786 0.786 - - - - - programmed cell death 6 [Source:MGI Symbol;Acc:MGI:109283]
96. Gm11491 ENSMUSG00000085310 73 0.786 0.786 - - - - - predicted gene 11491 [Source:MGI Symbol;Acc:MGI:3651138]
97. Mapkapk5 ENSMUSG00000029454 1616 0.786 0.786 - - - - - MAP kinase-activated protein kinase 5 [Source:MGI Symbol;Acc:MGI:1333110]
98. Dsel ENSMUSG00000038702 574 0.785 0.785 - - - - - dermatan sulfate epimerase-like [Source:MGI Symbol;Acc:MGI:2442948]
99. Fut11 ENSMUSG00000039357 537 0.784 0.784 - - - - - fucosyltransferase 11 [Source:MGI Symbol;Acc:MGI:1920318]
100. Cdc34 ENSMUSG00000020307 6920 0.783 0.783 - - - - - cell division cycle 34 [Source:MGI Symbol;Acc:MGI:102657]

There are 164 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA