Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Ddx54

Gene Name Gene ID Reads Annotation
Ddx54 ENSMUSG00000029599 3371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:MGI Symbol;Acc:MGI:1919240]







Genes with expression patterns similar to Ddx54

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ddx54 ENSMUSG00000029599 3371 6 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:MGI Symbol;Acc:MGI:1919240]
2. Akr1b10 ENSMUSG00000061758 586 1.661 - - - - 0.807 0.854 aldo-keto reductase family 1, member B10 (aldose reductase) [Source:MGI Symbol;Acc:MGI:1915111]
3. Ddx25 ENSMUSG00000032101 555 1.635 0.760 - - - - 0.875 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Source:MGI Symbol;Acc:MGI:1353582]
4. Sirpa ENSMUSG00000037902 940 1.561 0.753 - - - - 0.808 signal-regulatory protein alpha [Source:MGI Symbol;Acc:MGI:108563]
5. Gnl1 ENSMUSG00000024429 820 1.56 0.710 - - - - 0.850 guanine nucleotide binding protein-like 1 [Source:MGI Symbol;Acc:MGI:95764]
6. Zbtb17 ENSMUSG00000006215 855 1.538 - - - - 0.755 0.783 zinc finger and BTB domain containing 17 [Source:MGI Symbol;Acc:MGI:107410]
7. Oxsr1 ENSMUSG00000036737 2902 1 - 1.000 - - - - oxidative-stress responsive 1 [Source:MGI Symbol;Acc:MGI:1917378]
8. RP24-570C10.6 RP24-570C10.6 1922 1 - 1.000 - - - -
9. B9d2 ENSMUSG00000063439 1774 1 - 1.000 - - - - B9 protein domain 2 [Source:MGI Symbol;Acc:MGI:2387643]
10. Fhl2 ENSMUSG00000008136 2073 1 - 1.000 - - - - four and a half LIM domains 2 [Source:MGI Symbol;Acc:MGI:1338762]
11. Metap1 ENSMUSG00000005813 5209 1 - 1.000 - - - - methionyl aminopeptidase 1 [Source:MGI Symbol;Acc:MGI:1922874]
12. Jpx ENSMUSG00000097571 1606 1 - 1.000 - - - - Jpx transcript, Xist activator (non-protein coding) [Source:MGI Symbol;Acc:MGI:2180008]
13. Rfc4 ENSMUSG00000022881 1797 1 - 1.000 - - - - replication factor C (activator 1) 4 [Source:MGI Symbol;Acc:MGI:2146571]
14. Mbd4 ENSMUSG00000030322 3686 0.999 - 0.999 - - - - methyl-CpG binding domain protein 4 [Source:MGI Symbol;Acc:MGI:1333850]
15. Nus1 ENSMUSG00000023068 4291 0.999 - 0.999 - - - - NUS1 dehydrodolichyl diphosphate synthase subunit [Source:MGI Symbol;Acc:MGI:1196365]
16. Klhdc10 ENSMUSG00000029775 6240 0.999 - 0.999 - - - - kelch domain containing 10 [Source:MGI Symbol;Acc:MGI:1924038]
17. Mtfr1l ENSMUSG00000046671 3218 0.999 - 0.999 - - - - mitochondrial fission regulator 1-like [Source:MGI Symbol;Acc:MGI:1924074]
18. Zyg11b ENSMUSG00000034636 4618 0.999 - 0.999 - - - - zyg-ll family member B, cell cycle regulator [Source:MGI Symbol;Acc:MGI:2685277]
19. Ptdss1 ENSMUSG00000021518 4429 0.999 - 0.999 - - - - phosphatidylserine synthase 1 [Source:MGI Symbol;Acc:MGI:1276575]
20. Poc1b ENSMUSG00000019952 3527 0.999 - 0.999 - - - - POC1 centriolar protein B [Source:MGI Symbol;Acc:MGI:1918511]
21. Pax6 ENSMUSG00000027168 2751 0.999 - 0.999 - - - - paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
22. Ssbp2 ENSMUSG00000003992 5516 0.999 - 0.999 - - - - single-stranded DNA binding protein 2 [Source:MGI Symbol;Acc:MGI:1914220]
23. Nufip2 ENSMUSG00000037857 4757 0.999 - 0.999 - - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:MGI Symbol;Acc:MGI:1915814]
24. Sf3b2 ENSMUSG00000024853 10455 0.999 - 0.999 - - - - splicing factor 3b, subunit 2 [Source:MGI Symbol;Acc:MGI:2441856]
25. Qk ENSMUSG00000062078 10985 0.998 - 0.998 - - - - quaking [Source:MGI Symbol;Acc:MGI:97837]
26. Meis2 ENSMUSG00000027210 12084 0.998 - 0.998 - - - - Meis homeobox 2 [Source:MGI Symbol;Acc:MGI:108564]
27. Kif22 ENSMUSG00000030677 4914 0.997 - 0.997 - - - - kinesin family member 22 [Source:MGI Symbol;Acc:MGI:109233]
28. Psma2 ENSMUSG00000015671 11365 0.996 - 0.996 - - - - proteasome (prosome, macropain) subunit, alpha type 2 [Source:MGI Symbol;Acc:MGI:104885]
29. Bre 3054 0.996 - 0.996 - - - - brain and reproductive organ-expressed protein, transcript variant X1
30. Igf2r ENSMUSG00000023830 12577 0.996 - 0.996 - - - - insulin-like growth factor 2 receptor [Source:MGI Symbol;Acc:MGI:96435]
31. Smarcc2 ENSMUSG00000025369 11776 0.995 - 0.995 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:MGI Symbol;Acc:MGI:1915344]
32. Kif5b ENSMUSG00000006740 15165 0.994 - 0.994 - - - - kinesin family member 5B [Source:MGI Symbol;Acc:MGI:1098268]
33. Tnpo1 ENSMUSG00000009470 10504 0.994 - 0.994 - - - - transportin 1 [Source:MGI Symbol;Acc:MGI:2681523]
34. Sec31a ENSMUSG00000035325 20178 0.991 - 0.991 - - - - Sec31 homolog A (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1916412]
35. Hax1 ENSMUSG00000027944 7599 0.987 - 0.987 - - - - HCLS1 associated X-1 [Source:MGI Symbol;Acc:MGI:1346319]
36. Snap47 ENSMUSG00000009894 8699 0.983 - 0.983 - - - - synaptosomal-associated protein, 47 [Source:MGI Symbol;Acc:MGI:1915076]
37. Gm8738 ENSMUSG00000092540 9001 0.98 - 0.980 - - - - predicted gene 8738 [Source:MGI Symbol;Acc:MGI:3644778]
38. Hmgn1 ENSMUSG00000040681 55060 0.975 - 0.975 - - - - high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
39. Lman1 ENSMUSG00000041891 6635 0.974 - 0.974 - - - - lectin, mannose-binding, 1 [Source:MGI Symbol;Acc:MGI:1917611]
40. Map1b ENSMUSG00000052727 28977 0.967 - 0.967 - - - - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
41. Rps5 ENSMUSG00000012848 49542 0.953 - 0.953 - - - - ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
42. Rps4x ENSMUSG00000031320 60937 0.942 - 0.942 - - - - ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
43. Bms1 ENSMUSG00000030138 851 0.932 - - - - - 0.932 BMS1, ribosome biogenesis factor [Source:MGI Symbol;Acc:MGI:2446132]
44. Pkp3 ENSMUSG00000054065 110 0.931 - - - - - 0.931 plakophilin 3 [Source:MGI Symbol;Acc:MGI:1891830]
45. Hba-x ENSMUSG00000055609 87325 0.927 - 0.927 - - - - hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
46. Tecr ENSMUSG00000031708 37176 0.926 - 0.926 - - - - trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
47. Galnt14 ENSMUSG00000024064 186 0.925 - - - - - 0.925 polypeptide N-acetylgalactosaminyltransferase 14 [Source:MGI Symbol;Acc:MGI:1918935]
48. Irf9 ENSMUSG00000002325 582 0.918 - - - - - 0.918 interferon regulatory factor 9 [Source:MGI Symbol;Acc:MGI:107587]
49. Cars2 ENSMUSG00000056228 492 0.916 - - - - - 0.916 cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) [Source:MGI Symbol;Acc:MGI:1919191]
50. Nubpl ENSMUSG00000035142 554 0.913 - - - - - 0.913 nucleotide binding protein-like [Source:MGI Symbol;Acc:MGI:1924076]
51. Gm15249 Gm15249 167 0.911 - - - - - 0.911
52. Prkcb ENSMUSG00000052889 493 0.911 - - - - - 0.911 protein kinase C, beta [Source:MGI Symbol;Acc:MGI:97596]
53. Srr ENSMUSG00000001323 373 0.911 - - - - - 0.911 serine racemase [Source:MGI Symbol;Acc:MGI:1351636]
54. 1300002K09Rik 1300002K09Rik 75 0.908 - - - - - 0.908
55. Rpl9 ENSMUSG00000047215 1086 0.907 - - - - - 0.907 ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:1298373]
56. Parp16 ENSMUSG00000032392 195 0.907 - - - - - 0.907 poly (ADP-ribose) polymerase family, member 16 [Source:MGI Symbol;Acc:MGI:2446133]
57. Ip6k2 ENSMUSG00000032599, ENSMUSG00000106672 724 0.905 - - - - - 0.905 inositol hexaphosphate kinase 2 [Source:MGI Symbol;Acc:MGI:1923750]
58. Bcat2 ENSMUSG00000030826 198 0.905 - - - - - 0.905 branched chain aminotransferase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1276534]
59. 1810019D21Rik ENSMUSG00000086390 50 0.905 - - - - - 0.905 RIKEN cDNA 1810019D21 gene [Source:MGI Symbol;Acc:MGI:1917021]
60. Gm23458 ENSMUSG00000065191 51 0.904 - - - - - 0.904 predicted gene, 23458 [Source:MGI Symbol;Acc:MGI:5453235]
61. Gm13362 ENSMUSG00000086418 31 0.904 - - - - - 0.904 predicted gene 13362 [Source:MGI Symbol;Acc:MGI:3652150]
62. Gm12024 ENSMUSG00000081101 53 0.904 - - - - - 0.904 predicted gene 12024 [Source:MGI Symbol;Acc:MGI:3650980]
63. Gm5250 ENSMUSG00000069620 31 0.904 - - - - - 0.904 predicted gene 5250 [Source:MGI Symbol;Acc:MGI:3647667]
64. 4930447F04Rik ENSMUSG00000031182 31 0.904 - - - - - 0.904 RIKEN cDNA 4930447F04 gene [Source:MGI Symbol;Acc:MGI:1922112]
65. Gm26793 ENSMUSG00000096999 40 0.904 - - - - - 0.904 predicted gene, 26793 [Source:MGI Symbol;Acc:MGI:5477287]
66. A830005F24Rik ENSMUSG00000053181 54 0.903 - - - - - 0.903 RIKEN cDNA A830005F24 gene [Source:MGI Symbol;Acc:MGI:3045249]
67. Ascl2 ENSMUSG00000009248 66 0.903 - - - - - 0.903 achaete-scute family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:96920]
68. Panx2 ENSMUSG00000058441 42 0.903 - - - - - 0.903 pannexin 2 [Source:MGI Symbol;Acc:MGI:1890615]
69. Paqr8 ENSMUSG00000025931 160 0.902 - - - - - 0.902 progestin and adipoQ receptor family member VIII [Source:MGI Symbol;Acc:MGI:1921479]
70. Pbld1 ENSMUSG00000112129 727 0.902 - - - - - 0.902 phenazine biosynthesis-like protein domain containing 1 [Source:MGI Symbol;Acc:MGI:1915621]
71. Gm2381 ENSMUSG00000092225 56 0.902 - - - - - 0.902 predicted gene 2381 [Source:MGI Symbol;Acc:MGI:3780549]
72. Snta1 ENSMUSG00000027488 128 0.902 - - - - - 0.902 syntrophin, acidic 1 [Source:MGI Symbol;Acc:MGI:101772]
73. Gm9083 ENSMUSG00000083033 141 0.901 - - - - - 0.901 predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
74. Gm13613 ENSMUSG00000086819 36 0.901 - - - - - 0.901 predicted gene 13613 [Source:MGI Symbol;Acc:MGI:3650687]
75. Insl6 ENSMUSG00000050957 119 0.901 - - - - - 0.901 insulin-like 6 [Source:MGI Symbol;Acc:MGI:1351595]
76. Gm14966 ENSMUSG00000079467, ENSMUSG00000107250 141 0.9 - - - - - 0.900 predicted gene 14966 [Source:MGI Symbol;Acc:MGI:3705223]
77. Snord15b ENSMUSG00000064966 96 0.9 - - - - - 0.900 small nucleolar RNA, C/D box 14B [Source:MGI Symbol;Acc:MGI:3779515]
78. Ophn1 ENSMUSG00000031214 1005 0.9 - - - - - 0.900 oligophrenin 1 [Source:MGI Symbol;Acc:MGI:2151070]
79. Diap2 Diap2 297 0.899 - - - - - 0.899
80. Pkib ENSMUSG00000019876 677 0.899 - - - - - 0.899 protein kinase inhibitor beta, cAMP dependent, testis specific [Source:MGI Symbol;Acc:MGI:101937]
81. Esco1 ENSMUSG00000024293 313 0.898 - - - - - 0.898 establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:MGI Symbol;Acc:MGI:1925055]
82. Rpl23 ENSMUSG00000071415 83209 0.898 - 0.898 - - - - ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
83. Snx14 ENSMUSG00000032422 399 0.898 - - - - - 0.898 sorting nexin 14 [Source:MGI Symbol;Acc:MGI:2155664]
84. Csf1r ENSMUSG00000024621 344 0.898 - - - - - 0.898 colony stimulating factor 1 receptor [Source:MGI Symbol;Acc:MGI:1339758]
85. C230081A13Rik C230081A13Rik 1846 0.897 - - - - - 0.897
86. Pex12 ENSMUSG00000018733 304 0.895 - - - - - 0.895 peroxisomal biogenesis factor 12 [Source:MGI Symbol;Acc:MGI:2144177]
87. Gm16433 ENSMUSG00000043024 424 0.895 - - - - - 0.895 predicted gene 16433 [Source:MGI Symbol;Acc:MGI:3645626]
88. Trim28 ENSMUSG00000005566 48788 0.895 - 0.895 - - - - tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
89. Qsox2 ENSMUSG00000036327 342 0.895 - - - - - 0.895 quiescin Q6 sulfhydryl oxidase 2 [Source:MGI Symbol;Acc:MGI:2387194]
90. Dmrtb1 ENSMUSG00000028610 67 0.895 - - - - - 0.895 DMRT-like family B with proline-rich C-terminal, 1 [Source:MGI Symbol;Acc:MGI:1927125]
91. Cldn23 ENSMUSG00000055976 75 0.895 - - - - - 0.895 claudin 23 [Source:MGI Symbol;Acc:MGI:1919158]
92. Dyrk2 ENSMUSG00000028630 251 0.894 - - - - - 0.894 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:MGI Symbol;Acc:MGI:1330301]
93. 1600002H07Rik 740 0.894 - - - - - 0.894 RIKEN cDNA 1600002H07 gene, transcript variant X2
94. Acsl5 ENSMUSG00000024981 381 0.894 - - - - - 0.894 acyl-CoA synthetase long-chain family member 5 [Source:MGI Symbol;Acc:MGI:1919129]
95. Entpd5 ENSMUSG00000021236 515 0.893 - - - - - 0.893 ectonucleoside triphosphate diphosphohydrolase 5 [Source:MGI Symbol;Acc:MGI:1321385]
96. Nphp4 ENSMUSG00000039577 216 0.891 - - - - - 0.891 nephronophthisis 4 (juvenile) homolog (human) [Source:MGI Symbol;Acc:MGI:2384210]
97. Wdr70 ENSMUSG00000039828 1123 0.89 - - - - - 0.890 WD repeat domain 70 [Source:MGI Symbol;Acc:MGI:1921020]
98. Lama5 ENSMUSG00000015647 351 0.89 - - - - - 0.890 laminin, alpha 5 [Source:MGI Symbol;Acc:MGI:105382]
99. D130062J21Rik D130062J21Rik 693 0.89 - - - - - 0.890
100. Zic2 ENSMUSG00000061524 472 0.89 - - - - - 0.890 zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]

There are 504 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA