Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ddx41

Gene Name Gene ID Reads Annotation
Ddx41 ENSMUSG00000021494 788 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Source:MGI Symbol;Acc:MGI:1920185]







Genes with expression patterns similar to Ddx41

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ddx41 ENSMUSG00000021494 788 6 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Source:MGI Symbol;Acc:MGI:1920185]
2. Rnpc3 ENSMUSG00000027981 855 1.703 - 0.824 - - - 0.879 RNA-binding region (RNP1, RRM) containing 3 [Source:MGI Symbol;Acc:MGI:1914475]
3. Nudt11 ENSMUSG00000073295 757 1.628 - 0.802 - - - 0.826 nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
4. Trim39 ENSMUSG00000045409 968 1.573 - 0.775 - - - 0.798 tripartite motif-containing 39 [Source:MGI Symbol;Acc:MGI:1890659]
5. Cndp2 ENSMUSG00000024644 840 1.544 - 0.746 - - - 0.798 CNDP dipeptidase 2 (metallopeptidase M20 family) [Source:MGI Symbol;Acc:MGI:1913304]
6. Sirpa ENSMUSG00000037902 940 1.54 - 0.775 - - - 0.765 signal-regulatory protein alpha [Source:MGI Symbol;Acc:MGI:108563]
7. 2210016F16Rik ENSMUSG00000021550 975 1.536 - 0.779 - - - 0.757 RIKEN cDNA 2210016F16 gene [Source:MGI Symbol;Acc:MGI:1917403]
8. Pank2 ENSMUSG00000037514 1182 1.534 - 0.778 - - - 0.756 pantothenate kinase 2 [Source:MGI Symbol;Acc:MGI:1921700]
9. Mycl ENSMUSG00000028654 904 1.49 - 0.760 - - - 0.730 v-myc avian myelocytomatosis viral oncogene lung carcinoma derived [Source:MGI Symbol;Acc:MGI:96799]
10. Pgls ENSMUSG00000031807 1593 0.934 - 0.934 - - - - 6-phosphogluconolactonase [Source:MGI Symbol;Acc:MGI:1913421]
11. 2410089E03Rik 1186 0.92 - 0.920 - - - - RIKEN cDNA 2410089E03 gene, transcript variant X8
12. Dusp16 ENSMUSG00000030203 951 0.919 - - - - - 0.919 dual specificity phosphatase 16 [Source:MGI Symbol;Acc:MGI:1917936]
13. Gm14966 ENSMUSG00000079467, ENSMUSG00000107250 141 0.916 - - - - - 0.916 predicted gene 14966 [Source:MGI Symbol;Acc:MGI:3705223]
14. Zw10 ENSMUSG00000032264 1164 0.916 - 0.916 - - - - zw10 kinetochore protein [Source:MGI Symbol;Acc:MGI:1349478]
15. Bms1 ENSMUSG00000030138 851 0.915 - - - - - 0.915 BMS1, ribosome biogenesis factor [Source:MGI Symbol;Acc:MGI:2446132]
16. Pkp3 ENSMUSG00000054065 110 0.912 - - - - - 0.912 plakophilin 3 [Source:MGI Symbol;Acc:MGI:1891830]
17. Cdk10 ENSMUSG00000033862 738 0.912 - - - - - 0.912 cyclin-dependent kinase 10 [Source:MGI Symbol;Acc:MGI:2448549]
18. Galnt14 ENSMUSG00000024064 186 0.91 - - - - - 0.910 polypeptide N-acetylgalactosaminyltransferase 14 [Source:MGI Symbol;Acc:MGI:1918935]
19. Skida1 ENSMUSG00000054074 1796 0.908 - 0.908 - - - - SKI/DACH domain containing 1 [Source:MGI Symbol;Acc:MGI:1919918]
20. Dtx2 ENSMUSG00000004947 1662 0.908 - 0.908 - - - - deltex 2, E3 ubiquitin ligase [Source:MGI Symbol;Acc:MGI:1921448]
21. Gm14325 ENSMUSG00000095362 531 0.908 - - - - - 0.908 predicted gene 14325 [Source:MGI Symbol;Acc:MGI:3702875]
22. Hist1h2ak ENSMUSG00000063021 232 0.908 - - - - - 0.908 histone cluster 1, H2ak [Source:MGI Symbol;Acc:MGI:2448297]
23. 2600006K01Rik ENSMUSG00000039798 486 0.907 - - - - - 0.907 RIKEN cDNA 2600006K01 gene [Source:MGI Symbol;Acc:MGI:1917569]
24. Kdelc1 ENSMUSG00000026047 1038 0.907 - 0.907 - - - - KDEL (Lys-Asp-Glu-Leu) containing 1 [Source:MGI Symbol;Acc:MGI:1919300]
25. Paqr8 ENSMUSG00000025931 160 0.907 - - - - - 0.907 progestin and adipoQ receptor family member VIII [Source:MGI Symbol;Acc:MGI:1921479]
26. Fahd2a ENSMUSG00000027371 222 0.907 - - - - - 0.907 fumarylacetoacetate hydrolase domain containing 2A [Source:MGI Symbol;Acc:MGI:1915376]
27. Snx14 ENSMUSG00000032422 399 0.905 - - - - - 0.905 sorting nexin 14 [Source:MGI Symbol;Acc:MGI:2155664]
28. Madd ENSMUSG00000040687 523 0.905 - - - - - 0.905 MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
29. Gm5250 ENSMUSG00000069620 31 0.904 - - - - - 0.904 predicted gene 5250 [Source:MGI Symbol;Acc:MGI:3647667]
30. 4930447F04Rik ENSMUSG00000031182 31 0.904 - - - - - 0.904 RIKEN cDNA 4930447F04 gene [Source:MGI Symbol;Acc:MGI:1922112]
31. Srr ENSMUSG00000001323 373 0.904 - - - - - 0.904 serine racemase [Source:MGI Symbol;Acc:MGI:1351636]
32. Gm26793 ENSMUSG00000096999 40 0.904 - - - - - 0.904 predicted gene, 26793 [Source:MGI Symbol;Acc:MGI:5477287]
33. Gm23458 ENSMUSG00000065191 51 0.904 - - - - - 0.904 predicted gene, 23458 [Source:MGI Symbol;Acc:MGI:5453235]
34. Gm13362 ENSMUSG00000086418 31 0.904 - - - - - 0.904 predicted gene 13362 [Source:MGI Symbol;Acc:MGI:3652150]
35. Gm12024 ENSMUSG00000081101 53 0.904 - - - - - 0.904 predicted gene 12024 [Source:MGI Symbol;Acc:MGI:3650980]
36. Rpl9 ENSMUSG00000047215 1086 0.903 - - - - - 0.903 ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:1298373]
37. Acsl5 ENSMUSG00000024981 381 0.903 - - - - - 0.903 acyl-CoA synthetase long-chain family member 5 [Source:MGI Symbol;Acc:MGI:1919129]
38. Panx2 ENSMUSG00000058441 42 0.903 - - - - - 0.903 pannexin 2 [Source:MGI Symbol;Acc:MGI:1890615]
39. 1810019D21Rik ENSMUSG00000086390 50 0.903 - - - - - 0.903 RIKEN cDNA 1810019D21 gene [Source:MGI Symbol;Acc:MGI:1917021]
40. Gm9083 ENSMUSG00000083033 141 0.903 - - - - - 0.903 predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
41. Dyrk2 ENSMUSG00000028630 251 0.903 - - - - - 0.903 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:MGI Symbol;Acc:MGI:1330301]
42. Ascl2 ENSMUSG00000009248 66 0.903 - - - - - 0.903 achaete-scute family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:96920]
43. Gm13613 ENSMUSG00000086819 36 0.903 - - - - - 0.903 predicted gene 13613 [Source:MGI Symbol;Acc:MGI:3650687]
44. Gm2381 ENSMUSG00000092225 56 0.902 - - - - - 0.902 predicted gene 2381 [Source:MGI Symbol;Acc:MGI:3780549]
45. Insl6 ENSMUSG00000050957 119 0.902 - - - - - 0.902 insulin-like 6 [Source:MGI Symbol;Acc:MGI:1351595]
46. A830005F24Rik ENSMUSG00000053181 54 0.902 - - - - - 0.902 RIKEN cDNA A830005F24 gene [Source:MGI Symbol;Acc:MGI:3045249]
47. 1300002K09Rik 1300002K09Rik 75 0.901 - - - - - 0.901
48. Ino80d ENSMUSG00000040865 1226 0.901 - 0.901 - - - - INO80 complex subunit D [Source:MGI Symbol;Acc:MGI:3027003]
49. Csf1r ENSMUSG00000024621 344 0.9 - - - - - 0.900 colony stimulating factor 1 receptor [Source:MGI Symbol;Acc:MGI:1339758]
50. 2900076A07Rik ENSMUSG00000097277 202 0.9 - - - - - 0.900 RIKEN cDNA 2900076A07 gene [Source:MGI Symbol;Acc:MGI:1920242]
51. Lama5 ENSMUSG00000015647 351 0.899 - - - - - 0.899 laminin, alpha 5 [Source:MGI Symbol;Acc:MGI:105382]
52. Snord15b ENSMUSG00000064966 96 0.898 - - - - - 0.898 small nucleolar RNA, C/D box 14B [Source:MGI Symbol;Acc:MGI:3779515]
53. Nup214 ENSMUSG00000001855 1695 0.897 - - - - - 0.897 nucleoporin 214 [Source:MGI Symbol;Acc:MGI:1095411]
54. Kremen2 ENSMUSG00000040680 164 0.897 - - - - - 0.897 kringle containing transmembrane protein 2 [Source:MGI Symbol;Acc:MGI:1920266]
55. Snta1 ENSMUSG00000027488 128 0.896 - - - - - 0.896 syntrophin, acidic 1 [Source:MGI Symbol;Acc:MGI:101772]
56. Dmrtb1 ENSMUSG00000028610 67 0.896 - - - - - 0.896 DMRT-like family B with proline-rich C-terminal, 1 [Source:MGI Symbol;Acc:MGI:1927125]
57. D130062J21Rik D130062J21Rik 693 0.895 - - - - - 0.895
58. Cars2 ENSMUSG00000056228 492 0.895 - - - - - 0.895 cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) [Source:MGI Symbol;Acc:MGI:1919191]
59. Gm16433 ENSMUSG00000043024 424 0.895 - - - - - 0.895 predicted gene 16433 [Source:MGI Symbol;Acc:MGI:3645626]
60. 4930546H06Rik 4930546H06Rik 781 0.894 - - - - - 0.894
61. Poll ENSMUSG00000025218 310 0.894 - - - - - 0.894 polymerase (DNA directed), lambda [Source:MGI Symbol;Acc:MGI:1889000]
62. Ip6k2 ENSMUSG00000032599, ENSMUSG00000106672 724 0.894 - - - - - 0.894 inositol hexaphosphate kinase 2 [Source:MGI Symbol;Acc:MGI:1923750]
63. Rpf1 ENSMUSG00000028187 1517 0.894 - 0.894 - - - - ribosome production factor 1 homolog [Source:MGI Symbol;Acc:MGI:1917535]
64. Gm15249 Gm15249 167 0.893 - - - - - 0.893
65. Cldn23 ENSMUSG00000055976 75 0.892 - - - - - 0.892 claudin 23 [Source:MGI Symbol;Acc:MGI:1919158]
66. Parp16 ENSMUSG00000032392 195 0.892 - - - - - 0.892 poly (ADP-ribose) polymerase family, member 16 [Source:MGI Symbol;Acc:MGI:2446133]
67. 1600002H07Rik 740 0.891 - - - - - 0.891 RIKEN cDNA 1600002H07 gene, transcript variant X2
68. Epdr1 ENSMUSG00000002808 561 0.891 - - - - - 0.891 ependymin related protein 1 (zebrafish) [Source:MGI Symbol;Acc:MGI:2145369]
69. Zic2 ENSMUSG00000061524 472 0.891 - - - - - 0.891 zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
70. Irf9 ENSMUSG00000002325 582 0.889 - - - - - 0.889 interferon regulatory factor 9 [Source:MGI Symbol;Acc:MGI:107587]
71. Ppl ENSMUSG00000039457 107 0.889 - - - - - 0.889 periplakin [Source:MGI Symbol;Acc:MGI:1194898]
72. Slk ENSMUSG00000025060 3182 0.889 - - - - - 0.889 STE20-like kinase [Source:MGI Symbol;Acc:MGI:103241]
73. Wipf2 ENSMUSG00000038013 2600 0.889 - - - - - 0.889 WAS/WASL interacting protein family, member 2 [Source:MGI Symbol;Acc:MGI:1924462]
74. Cdh1 ENSMUSG00000000303 383 0.889 - - - - - 0.889 cadherin 1 [Source:MGI Symbol;Acc:MGI:88354]
75. Esco1 ENSMUSG00000024293 313 0.889 - - - - - 0.889 establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:MGI Symbol;Acc:MGI:1925055]
76. Pkib ENSMUSG00000019876 677 0.888 - - - - - 0.888 protein kinase inhibitor beta, cAMP dependent, testis specific [Source:MGI Symbol;Acc:MGI:101937]
77. Mvb12a ENSMUSG00000031813 968 0.888 - - - - - 0.888 multivesicular body subunit 12A [Source:MGI Symbol;Acc:MGI:1920961]
78. Pbld1 ENSMUSG00000112129 727 0.887 - - - - - 0.887 phenazine biosynthesis-like protein domain containing 1 [Source:MGI Symbol;Acc:MGI:1915621]
79. Ap3b1 ENSMUSG00000021686 3044 0.887 - 0.887 - - - - adaptor-related protein complex 3, beta 1 subunit [Source:MGI Symbol;Acc:MGI:1333879]
80. Hmox1 ENSMUSG00000005413 393 0.886 - - - - - 0.886 heme oxygenase 1 [Source:MGI Symbol;Acc:MGI:96163]
81. Ddx54 ENSMUSG00000029599 3371 0.886 - - - - - 0.886 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:MGI Symbol;Acc:MGI:1919240]
82. Tfeb ENSMUSG00000023990 568 0.886 - - - - - 0.886 transcription factor EB [Source:MGI Symbol;Acc:MGI:103270]
83. Lypd6 ENSMUSG00000050447 283 0.885 - - - - - 0.885 LY6/PLAUR domain containing 6 [Source:MGI Symbol;Acc:MGI:2443848]
84. Oip5 ENSMUSG00000072980 470 0.884 - - - - - 0.884 Opa interacting protein 5 [Source:MGI Symbol;Acc:MGI:1917895]
85. Qsox2 ENSMUSG00000036327 342 0.884 - - - - - 0.884 quiescin Q6 sulfhydryl oxidase 2 [Source:MGI Symbol;Acc:MGI:2387194]
86. 2700046G09Rik ENSMUSG00000097787 327 0.883 - - - - - 0.883 RIKEN cDNA 2700046G09 gene [Source:MGI Symbol;Acc:MGI:1914438]
87. Mif4gd ENSMUSG00000020743 422 0.883 - - - - - 0.883 MIF4G domain containing [Source:MGI Symbol;Acc:MGI:1916924]
88. Ophn1 ENSMUSG00000031214 1005 0.882 - - - - - 0.882 oligophrenin 1 [Source:MGI Symbol;Acc:MGI:2151070]
89. Nphp4 ENSMUSG00000039577 216 0.882 - - - - - 0.882 nephronophthisis 4 (juvenile) homolog (human) [Source:MGI Symbol;Acc:MGI:2384210]
90. Emid1 ENSMUSG00000034164 456 0.882 - - - - - 0.882 EMI domain containing 1 [Source:MGI Symbol;Acc:MGI:2155091]
91. Pex12 ENSMUSG00000018733 304 0.882 - - - - - 0.882 peroxisomal biogenesis factor 12 [Source:MGI Symbol;Acc:MGI:2144177]
92. Gm15446 ENSMUSG00000090015 373 0.881 - - - - - 0.881 predicted gene 15446 [Source:MGI Symbol;Acc:MGI:3709333]
93. Alyref2 ENSMUSG00000060244 351 0.881 - - - - - 0.881 Aly/REF export factor 2 [Source:MGI Symbol;Acc:MGI:1913144]
94. 1110038F14Rik ENSMUSG00000063236 1264 0.88 - - - - - 0.880 RIKEN cDNA 1110038F14 gene [Source:MGI Symbol;Acc:MGI:2152337]
95. Tufm ENSMUSG00000073838 265 0.88 - - - - - 0.880 Tu translation elongation factor, mitochondrial [Source:MGI Symbol;Acc:MGI:1923686]
96. Slc7a11 ENSMUSG00000027737 244 0.88 - - - - - 0.880 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 [Source:MGI Symbol;Acc:MGI:1347355]
97. Slc40a1 ENSMUSG00000025993 484 0.879 - - - - - 0.879 solute carrier family 40 (iron-regulated transporter), member 1 [Source:MGI Symbol;Acc:MGI:1315204]
98. Slc25a33 ENSMUSG00000028982 440 0.879 - - - - - 0.879 solute carrier family 25, member 33 [Source:MGI Symbol;Acc:MGI:1917806]
99. Diap2 Diap2 297 0.879 - - - - - 0.879
100. Pes1 ENSMUSG00000020430 4080 0.878 - - - - - 0.878 pescadillo ribosomal biogenesis factor 1 [Source:MGI Symbol;Acc:MGI:1890613]

There are 487 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA