Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ddx3x

Gene Name Gene ID Reads Annotation
Ddx3x ENSMUSG00000000787 27968 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]







Genes with expression patterns similar to Ddx3x

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ddx3x ENSMUSG00000000787 27968 6 1.000 1.000 1.000 1.000 1.000 1.000 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
2. Ubqln2 ENSMUSG00000050148 5374 1.753 0.979 - 0.774 - - - ubiquilin 2 [Source:MGI Symbol;Acc:MGI:1860283]
3. Dek ENSMUSG00000021377 17329 1.697 0.882 - 0.815 - - - DEK oncogene (DNA binding) [Source:MGI Symbol;Acc:MGI:1926209]
4. Eif5a ENSMUSG00000078812 71171 1.577 0.853 0.724 - - - - eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
5. Ivns1abp ENSMUSG00000023150 9971 0.981 0.981 - - - - - influenza virus NS1A binding protein [Source:MGI Symbol;Acc:MGI:2152389]
6. Rpl15 ENSMUSG00000012405 10694 0.979 0.979 - - - - - ribosomal protein L15 [Source:MGI Symbol;Acc:MGI:1913730]
7. Cebpz ENSMUSG00000024081 3514 0.978 0.978 - - - - - CCAAT/enhancer binding protein zeta [Source:MGI Symbol;Acc:MGI:109386]
8. Snx4 ENSMUSG00000022808 4583 0.978 0.978 - - - - - sorting nexin 4 [Source:MGI Symbol;Acc:MGI:1916400]
9. Glg1 ENSMUSG00000003316 8749 0.978 0.978 - - - - - golgi apparatus protein 1 [Source:MGI Symbol;Acc:MGI:104967]
10. Snrpb2 ENSMUSG00000008333 7592 0.977 0.977 - - - - - U2 small nuclear ribonucleoprotein B [Source:MGI Symbol;Acc:MGI:104805]
11. Rabgap1 ENSMUSG00000035437 4628 0.977 0.977 - - - - - RAB GTPase activating protein 1 [Source:MGI Symbol;Acc:MGI:2385139]
12. Aida ENSMUSG00000042901 4507 0.977 0.977 - - - - - axin interactor, dorsalization associated [Source:MGI Symbol;Acc:MGI:1919737]
13. Anp32e ENSMUSG00000015749 13671 0.976 0.976 - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:MGI Symbol;Acc:MGI:1913721]
14. Psip1 ENSMUSG00000028484 15380 0.976 0.976 - - - - - PC4 and SFRS1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2142116]
15. B830012L14Rik ENSMUSG00000098202 2865 0.975 0.975 - - - - - RIKEN cDNA B830012L14 gene [Source:MGI Symbol;Acc:MGI:2443332]
16. Cdt1 ENSMUSG00000006585 5994 0.975 0.975 - - - - - chromatin licensing and DNA replication factor 1 [Source:MGI Symbol;Acc:MGI:1914427]
17. Sh2d3c ENSMUSG00000059013 3483 0.975 0.975 - - - - - SH2 domain containing 3C [Source:MGI Symbol;Acc:MGI:1351631]
18. Ppfia1 ENSMUSG00000037519 3319 0.975 0.975 - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:MGI Symbol;Acc:MGI:1924750]
19. Usp31 ENSMUSG00000063317 2365 0.974 0.974 - - - - - ubiquitin specific peptidase 31 [Source:MGI Symbol;Acc:MGI:1923429]
20. Tcp11l1 ENSMUSG00000027175 1931 0.974 0.974 - - - - - t-complex 11 like 1 [Source:MGI Symbol;Acc:MGI:2444263]
21. Hnrnpul1 ENSMUSG00000040725 4933 0.974 0.974 - - - - - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:MGI Symbol;Acc:MGI:2443517]
22. Sptbn2 ENSMUSG00000067889 4571 0.974 0.974 - - - - - spectrin beta, non-erythrocytic 2 [Source:MGI Symbol;Acc:MGI:1313261]
23. Zfp384 ENSMUSG00000038346 1875 0.974 0.974 - - - - - zinc finger protein 384 [Source:MGI Symbol;Acc:MGI:2443203]
24. Ovca2 ENSMUSG00000038268 1870 0.974 0.974 - - - - - candidate tumor suppressor in ovarian cancer 2 [Source:MGI Symbol;Acc:MGI:2179725]
25. Dph6 ENSMUSG00000057147 3784 0.974 0.974 - - - - - diphthamine biosynthesis 6 [Source:MGI Symbol;Acc:MGI:1913882]
26. Rbm5 ENSMUSG00000032580 7538 0.974 0.974 - - - - - RNA binding motif protein 5 [Source:MGI Symbol;Acc:MGI:1933204]
27. Dct ENSMUSG00000022129 1192 0.973 0.973 - - - - - dopachrome tautomerase [Source:MGI Symbol;Acc:MGI:102563]
28. Xbp1 ENSMUSG00000020484 6209 0.973 0.973 - - - - - X-box binding protein 1 [Source:MGI Symbol;Acc:MGI:98970]
29. Clip1 ENSMUSG00000049550 5759 0.973 0.973 - - - - - CAP-GLY domain containing linker protein 1 [Source:MGI Symbol;Acc:MGI:1928401]
30. Mex3d ENSMUSG00000048696 2206 0.969 0.969 - - - - - mex3 RNA binding family member D [Source:MGI Symbol;Acc:MGI:2681847]
31. Gm20716 ENSMUSG00000093752 3044 0.968 0.968 - - - - - predicted gene 20716 [Source:MGI Symbol;Acc:MGI:5313163]
32. Cox6c ENSMUSG00000014313 15445 0.963 0.963 - - - - - cytochrome c oxidase subunit 6C [Source:MGI Symbol;Acc:MGI:104614]
33. Snrpb ENSMUSG00000027404 20831 0.961 0.961 - - - - - small nuclear ribonucleoprotein B [Source:MGI Symbol;Acc:MGI:98342]
34. Erp44 ENSMUSG00000028343 4977 0.96 0.960 - - - - - endoplasmic reticulum protein 44 [Source:MGI Symbol;Acc:MGI:1923549]
35. H3f3b ENSMUSG00000016559 37027 0.959 0.959 - - - - - H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
36. Uba1 ENSMUSG00000001924 21204 0.951 0.951 - - - - - ubiquitin-like modifier activating enzyme 1 [Source:MGI Symbol;Acc:MGI:98890]
37. Rpl36al ENSMUSG00000049751 6390 0.944 0.944 - - - - - ribosomal protein L36A-like [Source:MGI Symbol;Acc:MGI:1913733]
38. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 26045 0.925 0.925 - - - - - aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
39. Rpl13a ENSMUSG00000074129 29575 0.922 0.922 - - - - - ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
40. Fkbp1a ENSMUSG00000032966 56463 0.915 0.915 - - - - - FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
41. Gm14586 ENSMUSG00000083621 39408 0.914 0.914 - - - - - predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
42. Matr3 ENSMUSG00000037236 11220 0.914 - - 0.914 - - - matrin 3 [Source:MGI Symbol;Acc:MGI:1298379]
43. Lrrc17 ENSMUSG00000039883 11592 0.903 - - 0.903 - - - leucine rich repeat containing 17 [Source:MGI Symbol;Acc:MGI:1921761]
44. Zfp710 ENSMUSG00000048897 4322 0.902 - 0.902 - - - - zinc finger protein 710 [Source:MGI Symbol;Acc:MGI:1921747]
45. Myo10 ENSMUSG00000022272 3049 0.902 - 0.902 - - - - myosin X [Source:MGI Symbol;Acc:MGI:107716]
46. Gm15387 ENSMUSG00000082585 9290 0.889 - 0.889 - - - - predicted gene 15387 [Source:MGI Symbol;Acc:MGI:3705374]
47. Zfhx4 ENSMUSG00000025255 6456 0.87 - - 0.870 - - - zinc finger homeodomain 4 [Source:MGI Symbol;Acc:MGI:2137668]
48. Zfp462 ENSMUSG00000060206 6068 0.869 - - 0.869 - - - zinc finger protein 462 [Source:MGI Symbol;Acc:MGI:107690]
49. Nsfl1c ENSMUSG00000027455 4705 0.856 - 0.856 - - - - NSFL1 (p97) cofactor (p47) [Source:MGI Symbol;Acc:MGI:3042273]
50. Ikzf5 ENSMUSG00000040167 2156 0.855 - - 0.855 - - - IKAROS family zinc finger 5 [Source:MGI Symbol;Acc:MGI:1914393]
51. C1d ENSMUSG00000000581 5054 0.847 - - 0.847 - - - C1D nuclear receptor co-repressor [Source:MGI Symbol;Acc:MGI:1927354]
52. Mtf2 ENSMUSG00000029267 8936 0.845 - - 0.845 - - - metal response element binding transcription factor 2 [Source:MGI Symbol;Acc:MGI:105050]
53. Ptp4a1 ENSMUSG00000026064, ENSMUSG00000117310 16237 0.837 - - 0.837 - - - protein tyrosine phosphatase 4a1 [Source:NCBI gene;Acc:19243]
54. Qk ENSMUSG00000062078 10985 0.836 - - 0.836 - - - quaking [Source:MGI Symbol;Acc:MGI:97837]
55. Eif4g2 ENSMUSG00000005610 83479 0.829 - - 0.829 - - - eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
56. AI597468 AI597468 3278 0.828 - - 0.828 - - -
57. Smc2 ENSMUSG00000028312 8888 0.828 - - 0.828 - - - structural maintenance of chromosomes 2 [Source:MGI Symbol;Acc:MGI:106067]
58. Smc6 ENSMUSG00000020608 5466 0.823 - - 0.823 - - - structural maintenance of chromosomes 6 [Source:MGI Symbol;Acc:MGI:1914491]
59. Rock1 ENSMUSG00000024290 4094 0.82 - - 0.820 - - - Rho-associated coiled-coil containing protein kinase 1 [Source:MGI Symbol;Acc:MGI:107927]
60. Caprin1 ENSMUSG00000027184 29723 0.815 - - 0.815 - - - cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]
61. Larp4 ENSMUSG00000023025 3957 0.806 - - 0.806 - - - La ribonucleoprotein domain family, member 4 [Source:MGI Symbol;Acc:MGI:2443114]
62. Top1 ENSMUSG00000070544 27667 0.803 - - 0.803 - - - topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
63. Abhd17b ENSMUSG00000047368 6987 0.8 - - 0.800 - - - abhydrolase domain containing 17B [Source:MGI Symbol;Acc:MGI:1917816]
64. Csde1 ENSMUSG00000068823 18265 0.796 - - 0.796 - - - cold shock domain containing E1, RNA binding [Source:MGI Symbol;Acc:MGI:92356]
65. Cct4 ENSMUSG00000007739 13574 0.793 - - 0.793 - - - chaperonin containing Tcp1, subunit 4 (delta) [Source:MGI Symbol;Acc:MGI:104689]
66. Snrpe ENSMUSG00000090553 15996 0.786 - - 0.786 - - - small nuclear ribonucleoprotein E [Source:MGI Symbol;Acc:MGI:98346]
67. Ccdc36 ENSMUSG00000047220 4976 0.781 - - 0.781 - - - coiled-coil domain containing 36 [Source:MGI Symbol;Acc:MGI:3612242]
68. Fbxo30 ENSMUSG00000047648 1917 0.78 - - 0.780 - - - F-box protein 30 [Source:MGI Symbol;Acc:MGI:1919115]
69. BC051077 ENSMUSG00000097163 3345 0.773 - - 0.773 - - - cDNA sequence BC051077 [Source:MGI Symbol;Acc:MGI:3039587]
70. Hdgfrp3 5842 0.772 - - 0.772 - - - hepatoma-derived growth factor, related protein 3
71. Csnk1a1 ENSMUSG00000024576 9981 0.771 - - 0.771 - - - casein kinase 1, alpha 1 [Source:MGI Symbol;Acc:MGI:1934950]
72. Chpt1 ENSMUSG00000060002 1152 0.771 - - 0.771 - - - choline phosphotransferase 1 [Source:MGI Symbol;Acc:MGI:2384841]
73. Zfp518a ENSMUSG00000049164 1198 0.77 - - 0.770 - - - zinc finger protein 518A [Source:MGI Symbol;Acc:MGI:1919922]
74. Smc4 ENSMUSG00000034349 7290 0.768 - - 0.768 - - - structural maintenance of chromosomes 4 [Source:MGI Symbol;Acc:MGI:1917349]
75. Prorsd1 ENSMUSG00000032673 351 0.768 - - 0.768 - - - prolyl-tRNA synthetase domain containing 1 [Source:MGI Symbol;Acc:MGI:1915189]
76. mt-Atp8 ENSMUSG00000064356 13180 0.768 - - 0.768 - - - mitochondrially encoded ATP synthase 8 [Source:MGI Symbol;Acc:MGI:99926]
77. Gm5805 ENSMUSG00000061848 46054 0.765 - - 0.765 - - - predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
78. Fam199x ENSMUSG00000042595 3101 0.765 - - 0.765 - - - family with sequence similarity 199, X-linked [Source:MGI Symbol;Acc:MGI:2384304]
79. Dnaja2 ENSMUSG00000031701 16608 0.764 - - 0.764 - - - DnaJ heat shock protein family (Hsp40) member A2 [Source:MGI Symbol;Acc:MGI:1931882]
80. Rpl37 ENSMUSG00000041841 44995 0.761 - 0.761 - - - - ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
81. Cacybp ENSMUSG00000014226 13940 0.761 - - 0.761 - - - calcyclin binding protein [Source:MGI Symbol;Acc:MGI:1270839]
82. Prpf40a ENSMUSG00000061136 8476 0.76 - - 0.760 - - - pre-mRNA processing factor 40A [Source:MGI Symbol;Acc:MGI:1860512]
83. Ube3a ENSMUSG00000025326 5067 0.759 - - 0.759 - - - ubiquitin protein ligase E3A [Source:MGI Symbol;Acc:MGI:105098]
84. Gm2000 ENSMUSG00000078193 21504 0.758 - 0.758 - - - - predicted gene 2000 [Source:MGI Symbol;Acc:MGI:3780170]
85. Arid4b ENSMUSG00000039219 3853 0.757 - - 0.757 - - - AT rich interactive domain 4B (RBP1-like) [Source:MGI Symbol;Acc:MGI:2137512]
86. Yipf5 ENSMUSG00000024487 11380 0.755 - - 0.755 - - - Yip1 domain family, member 5 [Source:MGI Symbol;Acc:MGI:1914430]
87. Pvrl3 Pvrl3 3285 0.752 - - 0.752 - - -
88. Ndufb2 ENSMUSG00000002416 566 0.75 - - 0.750 - - - NADH:ubiquinone oxidoreductase subunit B2 [Source:MGI Symbol;Acc:MGI:1915448]
89. Pabpc1 ENSMUSG00000022283 50385 0.747 - - 0.747 - - - poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
90. Srsf10 ENSMUSG00000028676 5612 0.747 - - 0.747 - - - serine/arginine-rich splicing factor 10 [Source:MGI Symbol;Acc:MGI:1333805]
91. Pbrm1 ENSMUSG00000042323 25383 0.742 - - 0.742 - - - polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
92. Gm12715 ENSMUSG00000059195 10137 0.735 - - 0.735 - - - predicted gene 12715 [Source:MGI Symbol;Acc:MGI:3650759]
93. Hsp90aa1 ENSMUSG00000021270 69545 0.734 - - 0.734 - - - heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
94. Hnrnpk ENSMUSG00000021546 31688 0.733 - - 0.733 - - - heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
95. Slc38a2 ENSMUSG00000022462 20138 0.732 - - 0.732 - - - solute carrier family 38, member 2 [Source:MGI Symbol;Acc:MGI:1915010]
96. Rps6ka6 ENSMUSG00000025665, ENSMUSG00000116203 6507 0.729 - - 0.729 - - - ribosomal protein S6 kinase polypeptide 6 [Source:MGI Symbol;Acc:MGI:1914321]
97. Skiv2l2 ENSMUSG00000016018 3259 0.729 - - 0.729 - - - superkiller viralicidic activity 2-like 2 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919448]
98. Ankrd32 Ankrd32 1791 0.728 - - 0.728 - - -
99. Nufip2 ENSMUSG00000037857 4757 0.728 - - 0.728 - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:MGI Symbol;Acc:MGI:1915814]
100. Ccne2 ENSMUSG00000028212 419 0.72 - - 0.720 - - - cyclin E2 [Source:MGI Symbol;Acc:MGI:1329034]

There are 11 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA