Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ddx39b

Gene Name Gene ID Reads Annotation
Ddx39b ENSMUSG00000019432 31517 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]







Genes with expression patterns similar to Ddx39b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ddx39b ENSMUSG00000019432 31517 6 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
2. Ndufa11 ENSMUSG00000002379 5382 1.762 0.794 0.968 - - - - NADH:ubiquinone oxidoreductase subunit A11 [Source:MGI Symbol;Acc:MGI:1917125]
3. Cks2 ENSMUSG00000062248 15997 0.969 - 0.969 - - - - CDC28 protein kinase regulatory subunit 2 [Source:MGI Symbol;Acc:MGI:1913447]
4. Mfsd10 ENSMUSG00000001082 4758 0.968 - 0.968 - - - - major facilitator superfamily domain containing 10 [Source:MGI Symbol;Acc:MGI:1915544]
5. Cd9 ENSMUSG00000030342 3230 0.968 - 0.968 - - - - CD9 antigen [Source:MGI Symbol;Acc:MGI:88348]
6. Gm4950 ENSMUSG00000069379 3717 0.967 - 0.967 - - - - predicted pseudogene 4950 [Source:MGI Symbol;Acc:MGI:3649015]
7. Fzr1 ENSMUSG00000020235 15613 0.964 - 0.964 - - - - fizzy and cell division cycle 20 related 1 [Source:MGI Symbol;Acc:MGI:1926790]
8. Fxyd6 ENSMUSG00000066705 4456 0.962 - 0.962 - - - - FXYD domain-containing ion transport regulator 6 [Source:MGI Symbol;Acc:MGI:1890226]
9. Zc3h11a ENSMUSG00000102976, ENSMUSG00000116275 8902 0.962 - 0.962 - - - - zinc finger CCCH type containing 11A [Source:MGI Symbol;Acc:MGI:1917829]
10. Dpysl2 ENSMUSG00000022048 17864 0.962 - 0.962 - - - - dihydropyrimidinase-like 2 [Source:MGI Symbol;Acc:MGI:1349763]
11. Eif4a3 ENSMUSG00000025580 5936 0.962 - 0.962 - - - - eukaryotic translation initiation factor 4A3 [Source:MGI Symbol;Acc:MGI:1923731]
12. Megf6 ENSMUSG00000057751 2314 0.961 - 0.961 - - - - multiple EGF-like-domains 6 [Source:MGI Symbol;Acc:MGI:1919351]
13. Mut ENSMUSG00000023921 3121 0.961 - 0.961 - - - - methylmalonyl-Coenzyme A mutase [Source:MGI Symbol;Acc:MGI:97239]
14. Dynll2 ENSMUSG00000020483 7870 0.961 - 0.961 - - - - dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347]
15. Tmem234 ENSMUSG00000028797 6517 0.961 - 0.961 - - - - transmembrane protein 234 [Source:MGI Symbol;Acc:MGI:1924049]
16. Prim2 ENSMUSG00000026134 5806 0.961 - 0.961 - - - - DNA primase, p58 subunit [Source:MGI Symbol;Acc:MGI:97758]
17. Papolg ENSMUSG00000020273 2870 0.961 - 0.961 - - - - poly(A) polymerase gamma [Source:MGI Symbol;Acc:MGI:2442119]
18. Sall2 ENSMUSG00000049532 3472 0.961 - 0.961 - - - - spalt like transcription factor 2 [Source:MGI Symbol;Acc:MGI:1354373]
19. Rprd1a ENSMUSG00000040446 3151 0.961 - 0.961 - - - - regulation of nuclear pre-mRNA domain containing 1A [Source:MGI Symbol;Acc:MGI:2385066]
20. Rbx1 ENSMUSG00000022400 12346 0.96 - 0.960 - - - - ring-box 1 [Source:MGI Symbol;Acc:MGI:1891829]
21. Pja1 ENSMUSG00000034403 6686 0.96 - 0.960 - - - - praja ring finger ubiquitin ligase 1 [Source:MGI Symbol;Acc:MGI:1101765]
22. Zranb2 ENSMUSG00000028180 14182 0.96 - 0.960 - - - - zinc finger, RAN-binding domain containing 2 [Source:MGI Symbol;Acc:MGI:1858211]
23. Hspa5 ENSMUSG00000026864 21863 0.959 - 0.959 - - - - heat shock protein 5 [Source:MGI Symbol;Acc:MGI:95835]
24. Rbbp7 ENSMUSG00000031353 10301 0.957 - 0.957 - - - - retinoblastoma binding protein 7, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194910]
25. Lsm14a ENSMUSG00000066568 12051 0.956 - 0.956 - - - - LSM14A mRNA processing body assembly factor [Source:MGI Symbol;Acc:MGI:1914320]
26. Dnaja1 ENSMUSG00000028410 15060 0.956 - 0.956 - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:MGI Symbol;Acc:MGI:1270129]
27. Rbms3 ENSMUSG00000039607 9380 0.954 - 0.954 - - - - RNA binding motif, single stranded interacting protein [Source:MGI Symbol;Acc:MGI:2444477]
28. Ubald1 ENSMUSG00000039568 7639 0.953 - 0.953 - - - - UBA-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1916255]
29. Lsm5 ENSMUSG00000091625 6903 0.953 - 0.953 - - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1913623]
30. RP23-45G16.5 RP23-45G16.5 2526 0.952 - 0.952 - - - -
31. Cul1 ENSMUSG00000029686 8892 0.949 - 0.949 - - - - cullin 1 [Source:MGI Symbol;Acc:MGI:1349658]
32. Hsp90aa1 ENSMUSG00000021270 69545 0.946 - 0.946 - - - - heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
33. Gm14586 ENSMUSG00000083621 39408 0.944 - 0.944 - - - - predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
34. Gm26917 ENSMUSG00000097971 11603 0.931 - 0.931 - - - - predicted gene, 26917 [Source:MGI Symbol;Acc:MGI:5504032]
35. Pkm ENSMUSG00000032294 110340 0.931 - 0.931 - - - - pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
36. Pbrm1 ENSMUSG00000042323 25383 0.929 - 0.929 - - - - polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
37. Cltc ENSMUSG00000047126 26002 0.923 - 0.923 - - - - clathrin, heavy polypeptide (Hc) [Source:MGI Symbol;Acc:MGI:2388633]
38. Mxra7 ENSMUSG00000020814 2601 0.922 - 0.922 - - - - matrix-remodelling associated 7 [Source:MGI Symbol;Acc:MGI:1914872]
39. Eef1b2 ENSMUSG00000025967 67373 0.921 - 0.921 - - - - eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
40. Ran ENSMUSG00000029430 58758 0.9 - 0.900 - - - - RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
41. Gm9864 ENSMUSG00000052005 829 0.892 0.892 - - - - - predicted gene 9864 [Source:MGI Symbol;Acc:MGI:3708663]
42. Kif21a ENSMUSG00000022629 1223 0.889 0.889 - - - - - kinesin family member 21A [Source:MGI Symbol;Acc:MGI:109188]
43. Zbed4 ENSMUSG00000034333 2620 0.886 0.886 - - - - - zinc finger, BED type containing 4 [Source:MGI Symbol;Acc:MGI:2682302]
44. Ywhaq ENSMUSG00000076432 31004 0.867 - 0.867 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:MGI Symbol;Acc:MGI:891963]
45. Adprh ENSMUSG00000002844 25667 0.867 - 0.867 - - - - ADP-ribosylarginine hydrolase [Source:MGI Symbol;Acc:MGI:1098234]
46. Chsy1 ENSMUSG00000032640 6085 0.863 0.863 - - - - - chondroitin sulfate synthase 1 [Source:MGI Symbol;Acc:MGI:2681120]
47. Tm9sf3 ENSMUSG00000025016 5603 0.862 0.862 - - - - - transmembrane 9 superfamily member 3 [Source:MGI Symbol;Acc:MGI:1914262]
48. Smim15 ENSMUSG00000071180 3604 0.861 0.861 - - - - - small integral membrane protein 15 [Source:MGI Symbol;Acc:MGI:1922866]
49. Gpx1 ENSMUSG00000063856 7321 0.86 0.860 - - - - - glutathione peroxidase 1 [Source:MGI Symbol;Acc:MGI:104887]
50. Immp1l ENSMUSG00000042670 2132 0.858 0.858 - - - - - IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913791]
51. Chchd2 ENSMUSG00000070493 83335 0.855 - 0.855 - - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
52. Mtch1 ENSMUSG00000024012 7467 0.851 0.851 - - - - - mitochondrial carrier 1 [Source:MGI Symbol;Acc:MGI:1929261]
53. Kdm4b ENSMUSG00000024201 1440 0.849 0.849 - - - - - lysine (K)-specific demethylase 4B [Source:MGI Symbol;Acc:MGI:2442355]
54. Hnrnpa0 ENSMUSG00000007836 36645 0.848 - 0.848 - - - - heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
55. Dqx1 ENSMUSG00000009145 545 0.845 0.845 - - - - - DEAQ RNA-dependent ATPase [Source:MGI Symbol;Acc:MGI:2136388]
56. Rprm ENSMUSG00000075334 1010 0.845 0.845 - - - - - reprimo, TP53 dependent G2 arrest mediator candidate [Source:MGI Symbol;Acc:MGI:1915124]
57. Med7 ENSMUSG00000020397 2247 0.845 0.845 - - - - - mediator complex subunit 7 [Source:MGI Symbol;Acc:MGI:1913463]
58. Adam15 ENSMUSG00000028041 630 0.844 0.844 - - - - - a disintegrin and metallopeptidase domain 15 (metargidin) [Source:MGI Symbol;Acc:MGI:1333882]
59. Nit2 ENSMUSG00000022751 895 0.844 0.844 - - - - - nitrilase family, member 2 [Source:MGI Symbol;Acc:MGI:1261838]
60. Ly75 ENSMUSG00000026980 766 0.844 0.844 - - - - - lymphocyte antigen 75 [Source:MGI Symbol;Acc:MGI:106662]
61. Gm12521 Gm12521 210 0.843 0.843 - - - - -
62. Tmem8 ENSMUSG00000024180 228 0.843 0.843 - - - - - transmembrane protein 8 (five membrane-spanning domains) [Source:MGI Symbol;Acc:MGI:1926283]
63. Ucp2 ENSMUSG00000033685 2664 0.843 0.843 - - - - - uncoupling protein 2 (mitochondrial, proton carrier) [Source:MGI Symbol;Acc:MGI:109354]
64. Lin7c ENSMUSG00000027162 3559 0.843 0.843 - - - - - lin-7 homolog C (C. elegans) [Source:MGI Symbol;Acc:MGI:1330839]
65. Hdac9 ENSMUSG00000004698 287 0.843 0.843 - - - - - histone deacetylase 9 [Source:MGI Symbol;Acc:MGI:1931221]
66. Fsd1 ENSMUSG00000011589 902 0.843 0.843 - - - - - fibronectin type 3 and SPRY domain-containing protein [Source:MGI Symbol;Acc:MGI:1934858]
67. Lrrc42 ENSMUSG00000028617 1235 0.843 0.843 - - - - - leucine rich repeat containing 42 [Source:MGI Symbol;Acc:MGI:1925059]
68. Epb4.1l4a Epb4.1l4a 1817 0.842 0.842 - - - - -
69. Mettl15 ENSMUSG00000057234 379 0.842 0.842 - - - - - methyltransferase like 15 [Source:MGI Symbol;Acc:MGI:1924144]
70. Lnx2 ENSMUSG00000016520 439 0.842 0.842 - - - - - ligand of numb-protein X 2 [Source:MGI Symbol;Acc:MGI:2155959]
71. Nlrx1 ENSMUSG00000032109 363 0.842 0.842 - - - - - NLR family member X1 [Source:MGI Symbol;Acc:MGI:2429611]
72. Ebf4 ENSMUSG00000053552 463 0.842 0.842 - - - - - early B cell factor 4 [Source:MGI Symbol;Acc:MGI:2385972]
73. Lmna ENSMUSG00000028063 622 0.842 0.842 - - - - - lamin A [Source:MGI Symbol;Acc:MGI:96794]
74. Ccdc166 ENSMUSG00000098176 524 0.84 0.840 - - - - - coiled-coil domain containing 166 [Source:MGI Symbol;Acc:MGI:1925902]
75. Gm10177 ENSMUSG00000090136 864 0.84 0.840 - - - - - predicted gene 10177 [Source:MGI Symbol;Acc:MGI:3704330]
76. Pno1 ENSMUSG00000020116 5621 0.839 0.839 - - - - - partner of NOB1 homolog [Source:MGI Symbol;Acc:MGI:1913499]
77. Yod1 ENSMUSG00000046404 793 0.839 0.839 - - - - - YOD1 deubiquitinase [Source:MGI Symbol;Acc:MGI:2442596]
78. Cwc27 ENSMUSG00000021715 899 0.839 0.839 - - - - - CWC27 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1914535]
79. 2310061I04Rik ENSMUSG00000050705 1463 0.838 0.838 - - - - - RIKEN cDNA 2310061I04 gene [Source:MGI Symbol;Acc:MGI:1916912]
80. Gm13680 ENSMUSG00000081400 447 0.838 0.838 - - - - - predicted gene 13680 [Source:MGI Symbol;Acc:MGI:3652285]
81. Cnot11 ENSMUSG00000003135 1391 0.838 0.838 - - - - - CCR4-NOT transcription complex, subunit 11 [Source:MGI Symbol;Acc:MGI:106580]
82. Haus8 ENSMUSG00000035439 1485 0.837 0.837 - - - - - 4HAUS augmin-like complex, subunit 8 [Source:MGI Symbol;Acc:MGI:1923728]
83. Kansl1 ENSMUSG00000018412 2084 0.837 0.837 - - - - - KAT8 regulatory NSL complex subunit 1 [Source:MGI Symbol;Acc:MGI:1923969]
84. Cenpl ENSMUSG00000026708 1567 0.837 0.837 - - - - - centromere protein L [Source:MGI Symbol;Acc:MGI:1917704]
85. Zzef1 ENSMUSG00000055670 953 0.836 0.836 - - - - - zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
86. Ccdc174 ENSMUSG00000034083 1439 0.836 0.836 - - - - - coiled-coil domain containing 174 [Source:MGI Symbol;Acc:MGI:2444652]
87. Clp1 ENSMUSG00000027079 3327 0.836 0.836 - - - - - CLP1, cleavage and polyadenylation factor I subunit [Source:MGI Symbol;Acc:MGI:2138968]
88. Zfp574 ENSMUSG00000045252 1410 0.836 0.836 - - - - - zinc finger protein 574 [Source:MGI Symbol;Acc:MGI:2442951]
89. Nhlrc2 ENSMUSG00000025078 1180 0.835 0.835 - - - - - NHL repeat containing 2 [Source:MGI Symbol;Acc:MGI:1914116]
90. Dpep1 ENSMUSG00000019278 422 0.835 0.835 - - - - - dipeptidase 1 (renal) [Source:MGI Symbol;Acc:MGI:94917]
91. Med8 ENSMUSG00000006392 1655 0.835 0.835 - - - - - mediator complex subunit 8 [Source:MGI Symbol;Acc:MGI:1915269]
92. Cep68 ENSMUSG00000044066 1055 0.834 0.834 - - - - - centrosomal protein 68 [Source:MGI Symbol;Acc:MGI:2667663]
93. Arhgef6 ENSMUSG00000031133 320 0.834 0.834 - - - - - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:MGI Symbol;Acc:MGI:1920591]
94. Cd151 ENSMUSG00000025510 2760 0.833 0.833 - - - - - CD151 antigen [Source:MGI Symbol;Acc:MGI:1096360]
95. Bub1 ENSMUSG00000027379 1882 0.833 0.833 - - - - - BUB1, mitotic checkpoint serine/threonine kinase [Source:MGI Symbol;Acc:MGI:1100510]
96. Rps6ka6 ENSMUSG00000025665, ENSMUSG00000116203 6507 0.833 0.833 - - - - - ribosomal protein S6 kinase polypeptide 6 [Source:MGI Symbol;Acc:MGI:1914321]
97. Sgol1 1886 0.833 0.833 - - - - - shugoshin-like 1 (S. pombe), transcript variant X2
98. Gm6483 ENSMUSG00000087153 1875 0.832 0.832 - - - - - predicted gene 6483 [Source:MGI Symbol;Acc:MGI:3644574]
99. Sh3gl3 ENSMUSG00000030638 2388 0.831 0.831 - - - - - SH3-domain GRB2-like 3 [Source:MGI Symbol;Acc:MGI:700011]
100. Mbtps2 ENSMUSG00000046873 1811 0.83 0.830 - - - - - membrane-bound transcription factor peptidase, site 2 [Source:MGI Symbol;Acc:MGI:2444506]

There are 115 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA