Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DROSHA

Gene Name Gene ID Reads Annotation
DROSHA ENSGALG00000012916 2310 drosha ribonuclease III [Source:NCBI gene;Acc:420911]











Genes with expression patterns similar to DROSHA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DROSHA ENSGALG00000012916 2310 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 drosha ribonuclease III [Source:NCBI gene;Acc:420911]
2. TIMM44 ENSGALG00000000352 5527 1.56 - - - - - - 0.843 0.717 - - translocase of inner mitochondrial membrane 44 [Source:NCBI gene;Acc:420053]
3. WDR3 ENSGALG00000014791 5856 1.537 - - - - - - 0.813 0.724 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
4. HOXA5 ENSGALG00000025929 6231 1.477 - - - - - - 0.741 0.736 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
5. RPA3 ENSGALG00000010700 6212 1.452 - - - - 0.730 - - 0.722 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
6. SETD3 ENSGALG00000034802 4125 1.438 - - - - - - 0.727 0.711 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
7. RAB21 ENSGALG00000010183 7718 0.848 - - - - - - 0.848 - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
8. PRIM2 ENSGALG00000016278 5160 0.841 - - - - - - - 0.841 - - DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
9. LOH12CR1 LOH12CR1 862 0.835 - - - - - - - - 0.835 -
10. ORAOV1 1267 0.833 - - - - - - - - 0.833 - oral cancer overexpressed 1, transcript variant X2
11. BLCAP ENSGALG00000027126 12200 0.826 - - - - - - 0.826 - - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
12. NR2C1 ENSGALG00000011327 5109 0.826 - - - - - - 0.826 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
13. OXSR1 ENSGALG00000005979 2905 0.825 - - - - - - 0.825 - - - oxidative stress responsive 1
14. DCUN1D1 ENSGALG00000008807 6545 0.821 - - - - - - 0.821 - - - defective in cullin neddylation 1 domain containing 1 [Source:NCBI gene;Acc:424963]
15. QARS ENSGALG00000029980 4207 0.81 - - - - - - 0.810 - - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
16. TFDP1 ENSGALG00000016823 17019 0.809 - - - - - - 0.809 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
17. ENSGALG00000016249 ENSGALG00000016249 3236 0.807 - - - - - - 0.807 - - -
18. C26H6ORF89 C26H6ORF89 1826 0.803 - - - - - - 0.803 - - -
19. SLC30A5 ENSGALG00000014787 5573 0.802 - - - - - - 0.802 - - - solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
20. CACTIN ENSGALG00000024391 1408 0.802 - - - - - - 0.802 - - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
21. NRIP1 ENSGALG00000015681 10711 0.802 - - - - - - 0.802 - - - nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8001]
22. NANS ENSGALG00000015320 10552 0.801 - - - - - - - 0.801 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
23. KIAA0020 KIAA0020 14353 0.799 - - - - - - 0.799 - - -
24. CYB5B ENSGALG00000000660 9733 0.799 - - - - - - 0.799 - - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
25. MCM3AP ENSGALG00000004363 3247 0.798 - - - - - - 0.798 - - - minichromosome maintenance complex component 3 associated protein [Source:HGNC Symbol;Acc:HGNC:6946]
26. SLMO2 SLMO2 9207 0.797 - - - - - - - 0.797 - -
27. SRSF1 ENSGALG00000005525 4376 0.794 - - - - - - 0.794 - - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
28. DPM2 ENSGALG00000005066 9121 0.794 - - - - - - 0.794 - - - dolichyl-phosphate mannosyltransferase subunit 2, regulatory [Source:NCBI gene;Acc:771539]
29. TSEN54 3192 0.793 - - - - - - 0.793 - - - tRNA splicing endonuclease subunit 54, transcript variant X2
30. NADK ENSGALG00000032413 1790 0.791 - - - - - - 0.791 - - - NAD kinase [Source:NCBI gene;Acc:419403]
31. FAM125B FAM125B 2953 0.788 - - - - - - 0.788 - - -
32. ANKRD49 ENSGALG00000017210 3247 0.786 - - - - - - 0.786 - - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
33. GKAP1 ENSGALG00000012586 2908 0.786 - - - - 0.786 - - - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
34. KLHL21 ENSGALG00000035211 6145 0.784 - - - - - - 0.784 - - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
35. PTTG1 17936 0.783 - - - - - - 0.783 - - - pituitary tumor-transforming 1, transcript variant X1
36. NOP16 ENSGALG00000003355 10692 0.782 - - - - - - 0.782 - - - NOP16 nucleolar protein
37. STRN3 ENSGALG00000040464 9045 0.78 - - - - - - - 0.780 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
38. TAF7 4725 0.779 - - - - - - 0.779 - - - TATA-box binding protein associated factor 7, transcript variant X1
39. FASTKD3 ENSGALG00000033521 1186 0.779 - - - - - - 0.779 - - - FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
40. ARHGEF7 ENSGALG00000031009 10090 0.778 - - - - - - 0.778 - - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
41. OFD1 ENSGALG00000016576 1916 0.777 - - - - 0.777 - - - - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
42. RSL1D1 ENSGALG00000033690 13638 0.776 - - - - - - 0.776 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
43. SNRNP27 ENSGALG00000013883 22212 0.776 - - - - - - 0.776 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
44. SP3 ENSGALG00000031796 8997 0.775 - - - - - - 0.775 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
45. C18orf8 C18orf8 1512 0.774 - - - - 0.774 - - - - -
46. RAB9A ENSGALG00000016579 3262 0.773 - - - - - - 0.773 - - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
47. MPG ENSGALG00000028691 1874 0.773 - - - - - - 0.773 - - - N-methylpurine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7211]
48. C11H19ORF12 C11H19ORF12 5149 0.773 - - - - 0.773 - - - - -
49. MAD2L2 ENSGALG00000004640 3971 0.773 - - - - - - 0.773 - - - MAD2 mitotic arrest deficient-like 2 (yeast) [Source:NCBI gene;Acc:419493]
50. FAM98A ENSGALG00000010428 9585 0.773 - - - - - - 0.773 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
51. ZNF302 ENSGALG00000034134 739 0.77 - - - - - - 0.770 - - - zinc finger protein 302 [Source:NCBI gene;Acc:417303]
52. KCNK1 ENSGALG00000011005 1643 0.77 - - - - - - 0.770 - - - potassium two pore domain channel subfamily K member 1 [Source:HGNC Symbol;Acc:HGNC:6272]
53. XBP1 ENSGALG00000005796 14007 0.768 - - - - - - - 0.768 - - X-box binding protein 1 [Source:NCBI gene;Acc:416918]
54. GGA.10540 GGA.10540 3324 0.767 - - - - 0.767 - - - - -
55. DUS2 856 0.767 - - - - 0.767 - - - - - dihydrouridine synthase 2, transcript variant X2
56. AMACR ENSGALG00000003326 2657 0.767 - - - - 0.767 - - - - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
57. UBE2K ENSGALG00000014290 2138 0.767 - - - - - - - 0.767 - - ubiquitin conjugating enzyme E2 K [Source:NCBI gene;Acc:428787]
58. MAK16 ENSGALG00000001663 7455 0.766 - - - - - - 0.766 - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
59. TSEN15 ENSGALG00000004782 2520 0.766 - - - - - - 0.766 - - - tRNA splicing endonuclease subunit 15 [Source:HGNC Symbol;Acc:HGNC:16791]
60. PPWD1 ENSGALG00000014756 1118 0.766 - - - - 0.766 - - - - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:28954]
61. UPF2 ENSGALG00000033772 9548 0.765 - - - - - - 0.765 - - - UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
62. ENSGALG00000027927 ENSGALG00000027927 654 0.764 - - - - - - 0.764 - - -
63. UTP15 ENSGALG00000013510 13122 0.763 - - - - - - - 0.763 - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
64. WHSC1L1 4065 0.763 - - - - - - 0.763 - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
65. NMB ENSGALG00000043506 1387 0.763 - - - - 0.763 - - - - - neuromedin B [Source:NCBI gene;Acc:415333]
66. SNAP29 ENSGALG00000040128 3581 0.763 - - - - - - 0.763 - - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
67. PPP2R5D ENSGALG00000040005 6804 0.762 - - - - - - 0.762 - - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
68. TMX4 ENSGALG00000028587 3513 0.762 - - - - - - - 0.762 - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
69. DLAT ENSGALG00000007904 3297 0.762 - - - - - - - 0.762 - - dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2896]
70. CLNS1A ENSGALG00000008574 25675 0.761 - - - - - - 0.761 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
71. CEP76 ENSGALG00000013858 1809 0.761 - - - - - - 0.761 - - - centrosomal protein 76
72. B3GAT2 ENSGALG00000031590 615 0.761 - - - - 0.761 - - - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
73. CANX ENSGALG00000032148 11297 0.76 - - - - 0.760 - - - - - calnexin [Source:NCBI gene;Acc:416288]
74. DHX38 ENSGALG00000000787 6913 0.76 - - - - - - 0.760 - - - DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
75. DNTTIP1 ENSGALG00000003575 4687 0.759 - - - - - - 0.759 - - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
76. UBE2Q2 3861 0.759 - - - - - - 0.759 - - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
77. METTL14 ENSGALG00000012000 5876 0.759 - - - - - - 0.759 - - - methyltransferase like 14 [Source:NCBI gene;Acc:422684]
78. ORAI2 ENSGALG00000001837 2528 0.758 - - - - - - 0.758 - - - ORAI calcium release-activated calcium modulator 2 [Source:NCBI gene;Acc:417509]
79. DMD ENSGALG00000016281 5657 0.758 - - - - - - 0.758 - - - dystrophin [Source:NCBI gene;Acc:396236]
80. DDX46 ENSGALG00000006404 8765 0.757 - - - - - - 0.757 - - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
81. DGUOK ENSGALG00000005961 5929 0.757 - - - - - - 0.757 - - - deoxyguanosine kinase [Source:NCBI gene;Acc:770922]
82. DCAF7 ENSGALG00000000510 8681 0.757 - - - - - - 0.757 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
83. AGO3 ENSGALG00000043711 5086 0.756 - - - - - - 0.756 - - - argonaute 3, RISC catalytic component [Source:NCBI gene;Acc:419628]
84. ENSGALG00000024395 ENSGALG00000024395 1855 0.756 - - - - - - 0.756 - - -
85. MRPL40 ENSGALG00000001587 20893 0.754 - - - - - - 0.754 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
86. SMAD1 ENSGALG00000009977 3540 0.754 - - - - - - 0.754 - - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
87. SIAH2 ENSGALG00000010395 2126 0.753 - - - - - - 0.753 - - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
88. ZNF598 ENSGALG00000005598 8270 0.753 - - - - - - 0.753 - - - zinc finger protein 598 [Source:HGNC Symbol;Acc:HGNC:28079]
89. SYAP1 ENSGALG00000016548 3347 0.753 - - - - - - 0.753 - - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
90. COG5 ENSGALG00000042764 4205 0.752 - - - - - - 0.752 - - - component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
91. FAM47E-STBD1 FAM47E-STBD1 1148 0.752 - - - - - - 0.752 - - -
92. AZIN1 ENSGALG00000029295 11085 0.752 - - - - - - - 0.752 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
93. EED ENSGALG00000014060 6467 0.751 - - - - - - 0.751 - - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
94. LAPTM4A ENSGALG00000016479 15973 0.751 - - - - - - 0.751 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
95. HOXB-7 HOXB-7 2066 0.75 - - - - - - 0.750 - - -
96. DLGAP5 ENSGALG00000012165 2406 0.749 - - - - - - 0.749 - - - DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]
97. NDUFC2 ENSGALG00000029172 26136 0.749 - - - - - - 0.749 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
98. EXOSC1 ENSGALG00000039917 5259 0.748 - - - - 0.748 - - - - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
99. GCSH ENSGALG00000032679 29231 0.748 - - - - - - - 0.748 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
100. CLIC3 ENSGALG00000038789 233 0.748 - - - - 0.748 - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]

There are 215 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA