Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DKC1

Gene Name Gene ID Reads Annotation
DKC1 ENSGALG00000005054 30350 dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]











Genes with expression patterns similar to DKC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DKC1 ENSGALG00000005054 30350 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
2. CDC40 ENSGALG00000015061 6118 1.793 - - - - - - 0.811 0.982 - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
3. TXNDC12 ENSGALG00000010569 13822 1.715 - - - - - - 0.783 0.932 - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
4. DEK ENSGALG00000012684 14179 1.691 - - - - - - 0.855 0.836 - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
5. PES1 ENSGALG00000007778 12248 1.677 - - - - - - 0.831 0.846 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
6. OCIAD1 ENSGALG00000014081 12065 1.672 - - - - - - 0.816 0.856 - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
7. LUC7L2 ENSGALG00000036238 11817 1.667 - - - - - - 0.825 0.842 - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
8. CMPK CMPK 9569 1.646 - - - - - - 0.807 0.839 - -
9. UBE2B ENSGALG00000032664 6069 1.639 - - - - - - 0.795 0.844 - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
10. SMC4 ENSGALG00000009553 15715 1.623 - - 0.733 - - - 0.890 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
11. PPP2R5D ENSGALG00000040005 6804 1.622 - - - - - - 0.779 0.843 - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
12. WDR61 ENSGALG00000003221 11352 1.614 - - - - - - 0.783 0.831 - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
13. CBLL1 ENSGALG00000038981 6725 1.603 - - 0.776 - - - 0.827 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
14. TET1 ENSGALG00000031604 13002 1.602 - - - - - - 0.805 0.797 - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
15. CASK ENSGALG00000042400 8485 1.58 - - - - - - 0.803 0.777 - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
16. WDR92 ENSGALG00000008760 3934 1.554 - - 0.710 - - - - 0.844 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
17. CHEK2 ENSGALG00000005695 1558 1.552 - - - - - - 0.714 0.838 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
18. IFT81 ENSGALG00000003854 2534 1.545 - - 0.704 - - - - 0.841 - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
19. ACTN1 ENSGALG00000042458 10477 1.542 - - - - - - 0.747 0.795 - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
20. SHISA5 ENSGALG00000004661 8573 1.542 - - - - - - 0.743 0.799 - - shisa family member 5 [Source:NCBI gene;Acc:415948]
21. BMS1 ENSGALG00000002624 8339 1.539 - - 0.713 - - - 0.826 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
22. POLR2H ENSGALG00000008534 21521 1.531 - - - - - - 0.702 0.829 - - RNA polymerase II subunit H [Source:NCBI gene;Acc:424954]
23. EHMT1 ENSGALG00000033678 5720 1.526 - - - - - - 0.746 0.780 - - euchromatic histone lysine methyltransferase 1 [Source:NCBI gene;Acc:417250]
24. ASF1A ENSGALG00000014887 11319 1.52 - - - - - - 0.753 0.767 - - anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]
25. ELOVL5 ENSGALG00000016314 18163 1.514 - - 0.745 - - - 0.769 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
26. RPL35 ENSGALG00000035677 252113 1.511 - - - - 0.705 - 0.806 - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
27. CHP1 ENSGALG00000008569 6876 1.507 - - - - - - 0.757 0.750 - - calcineurin like EF-hand protein 1 [Source:NCBI gene;Acc:423211]
28. NFI1 NFI1 6210 1.5 - - 0.746 - - - 0.754 - - -
29. UBR2 ENSGALG00000009906 7717 1.475 - - 0.704 - - - 0.771 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
30. SENP6 ENSGALG00000015901 8013 1.465 - - 0.701 - - - 0.764 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
31. MAP4K3 ENSGALG00000039720 5124 1.449 - - 0.706 - - - 0.743 - - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
32. PTCD3 ENSGALG00000015773 3059 1.426 - - 0.704 - - - 0.722 - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
33. NHP2L1 NHP2L1 12124 1.414 - - 0.713 - - - 0.701 - - -
34. HMGB2 ENSGALG00000010745 89235 0.93 - - - - - - 0.930 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
35. EIF2S1 ENSGALG00000009565 63906 0.925 - - - - - - 0.925 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
36. MRPL20 ENSGALG00000001542 28764 0.923 - - - - - - 0.923 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
37. YWHAZ ENSGALG00000031387 84985 0.903 - - - - - - 0.903 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
38. GLO1 ENSGALG00000010127 31662 0.899 - - - - - - 0.899 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
39. EIF3B ENSGALG00000040999 49971 0.896 - - - - - - 0.896 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
40. TXNDC17 ENSGALG00000027950 45004 0.895 - - - - - - 0.895 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
41. PARP1 ENSGALG00000009228 39433 0.895 - - - - - - 0.895 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
42. ZNF593 ENSGALG00000000542 79105 0.892 - - - - - - 0.892 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
43. MORF4L1 ENSGALG00000008146 29940 0.891 - - - - - - 0.891 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
44. PPIH ENSGALG00000004874 25558 0.89 - - - - - - 0.890 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
45. CSE1L ENSGALG00000004707 20653 0.89 - - - - - - 0.890 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
46. THRAP3 ENSGALG00000002144 21958 0.888 - - - - - - 0.888 - - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
47. SSR3 ENSGALG00000028683 24334 0.887 - - - - - - 0.887 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
48. SSBP1 ENSGALG00000012876 34256 0.886 - - - - - - 0.886 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
49. PSMB4 ENSGALG00000000905 46735 0.885 - - - - - - 0.885 - - - proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
50. SEC11A ENSGALG00000037553 32123 0.884 - - - - - - 0.884 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
51. PSMB2 ENSGALG00000026421 51885 0.881 - - - - - - 0.881 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
52. RUVBL1 ENSGALG00000005931 9379 0.881 - - - - - - 0.881 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
53. PPP1R7 ENSGALG00000031766 22187 0.881 - - - - - - 0.881 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
54. EIF4A2 ENSGALG00000008684 58507 0.879 - - - - - - 0.879 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
55. FKBP12 FKBP12 64317 0.875 - - - - - - 0.875 - - -
56. TMEM184C ENSGALG00000010019 7856 0.874 - - - - - - 0.874 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
57. NAA15 ENSGALG00000009782 18563 0.872 - - - - - - - 0.872 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
58. ENSGALG00000017396 ENSGALG00000017396 9028 0.871 - - - - - - 0.871 - - -
59. ENSGALG00000006463 ENSGALG00000006463 45151 0.869 - - - - - - 0.869 - - -
60. BLMH ENSGALG00000004259 36907 0.866 - - - - - - 0.866 - - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
61. RABGGTB ENSGALG00000011388 11654 0.866 - - - - - - 0.866 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
62. PCNP ENSGALG00000015330 15750 0.865 - - - - - - 0.865 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
63. SIKE1 ENSGALG00000002147 20836 0.865 - - - - - - 0.865 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
64. EWSR1 ENSGALG00000008149 13014 0.864 - - - - - - 0.864 - - - EWS RNA binding protein 1 [Source:NCBI gene;Acc:417022]
65. TMEM167A ENSGALG00000027332 13862 0.863 - - - - - - 0.863 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
66. NAA38 ENSGALG00000045783 11229 0.863 - - - - - - 0.863 - - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
67. NDUFAB1 ENSGALG00000006073 40467 0.862 - - - - - - 0.862 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
68. METAP2 ENSGALG00000011377 16311 0.862 - - - - - - 0.862 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
69. DDX19B ENSGALG00000039967 49600 0.862 - - - - - - 0.862 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
70. C11H16ORF80 C11H16ORF80 18673 0.861 - - - - - - 0.861 - - -
71. NDUFA12 ENSGALG00000011325 19807 0.86 - - - - - - 0.860 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
72. HSPA4 ENSGALG00000040882 20966 0.86 - - - - - - 0.860 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
73. TMED7 ENSGALG00000028484 21008 0.86 - - - - - - 0.860 - - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
74. SFPQ ENSGALG00000002514 66832 0.859 - - - - - - 0.859 - - - splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
75. C1H12ORF23 C1H12ORF23 13234 0.857 - - - - - - 0.857 - - -
76. GLRX3 ENSGALG00000010464 22578 0.857 - - - - - - 0.857 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
77. NUP50 ENSGALG00000014222 11743 0.856 - - - - - - 0.856 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
78. PRELID1 ENSGALG00000002990 55592 0.856 - - - - - - 0.856 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
79. RSL1D1 ENSGALG00000033690 13638 0.856 - - - - - - 0.856 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
80. RBBP4 ENSGALG00000003522 72455 0.856 - - - - - - 0.856 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
81. SNRNP40 ENSGALG00000000615 32298 0.856 - - - - - - 0.856 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
82. ULK2 ENSGALG00000004727 10729 0.855 - - - - - - 0.855 - - - unc-51 like autophagy activating kinase 2 [Source:HGNC Symbol;Acc:HGNC:13480]
83. KIF2C ENSGALG00000010120 8999 0.855 - - - - - - 0.855 - - - kinesin family member 2C, transcript variant X1
84. RPL36AL ENSGALG00000004952 205590 0.854 - - - - - - 0.854 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
85. SOD1 ENSGALG00000015844 35836 0.854 - - - - - - 0.854 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
86. RAD21 ENSGALG00000029523 25658 0.854 - - - - - - 0.854 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
87. TMEM30A ENSGALG00000015904 8533 0.851 - - - - - - 0.851 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
88. CLNS1A ENSGALG00000008574 25675 0.851 - - - - - - 0.851 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
89. SLC25A3 ENSGALG00000011514 62606 0.851 - - - - - - 0.851 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
90. SF3A2 ENSGALG00000021679 12580 0.851 - - - - - - 0.851 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
91. EGLN1 ENSGALG00000041422 11032 0.85 - - - - - - 0.850 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
92. DYNC1LI1 ENSGALG00000011491 11011 0.85 - - - - - - - 0.850 - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
93. NCOA4 ENSGALG00000002066 10544 0.849 - - - - - - - 0.849 - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
94. CCNH ENSGALG00000015641 8051 0.849 - - - - - - 0.849 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
95. UTP11L UTP11L 11927 0.849 - - - - - - 0.849 - - -
96. SRI ENSGALG00000008985 13865 0.848 - - - - - - 0.848 - - - sorcin [Source:NCBI gene;Acc:420538]
97. SIVA1 ENSGALG00000011619 15130 0.848 - - - - - - 0.848 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
98. TFB2M ENSGALG00000010651 4374 0.848 - - - - - - 0.848 - - - transcription factor B2, mitochondrial
99. METTL23 ENSGALG00000001790 7906 0.847 - - - - - - 0.847 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
100. TTYH2 ENSGALG00000026940 15628 0.847 - - - - - - 0.847 - - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]

There are 1002 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA