Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for DHX40

Gene Name Gene ID Reads Annotation
DHX40 ENSGALG00000005126 2815 DEAH-box helicase 40 [Source:HGNC Symbol;Acc:HGNC:18018]











Genes with expression patterns similar to DHX40

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DHX40 ENSGALG00000005126 2815 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAH-box helicase 40 [Source:HGNC Symbol;Acc:HGNC:18018]
2. RMI1 ENSGALG00000012592 3750 1.562 - - 0.805 - - - - 0.757 - - RecQ mediated genome instability 1 [Source:NCBI gene;Acc:431669]
3. ADSL ENSGALG00000012034 10280 1.524 - - - - - - 0.734 0.790 - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
4. HARS ENSGALG00000035080 11602 1.46 - - - - - - 0.707 0.753 - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
5. HNRNPD ENSGALG00000011184 10686 1.457 - - 0.754 - - - 0.703 - - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
6. C4orf27 C4orf27 16724 1.426 - - - - - - 0.705 0.721 - -
7. ENSGALG00000007514 ENSGALG00000007514 4866 1.412 - - - - - - 0.703 0.709 - -
8. CRLF3 ENSGALG00000003284 6002 0.842 - - - - - - - 0.842 - - cytokine receptor like factor 3 [Source:NCBI gene;Acc:417407]
9. C1H11ORF70 ENSGALG00000017189 395 0.83 - - 0.830 - - - - - - - chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
10. ENSGALG00000011942 ENSGALG00000011942 175 0.823 - - 0.823 - - - - - - -
11. EMP2 ENSGALG00000027058 3925 0.822 - - 0.822 - - - - - - - epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
12. PLEKHA5 ENSGALG00000013134 3656 0.82 - - 0.820 - - - - - - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
13. EBAG9 ENSGALG00000036293 10058 0.82 - - - - - - - 0.820 - - estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
14. TEX264 ENSGALG00000003832 3053 0.816 - - 0.816 - - - - - - - testis expressed 264 [Source:NCBI gene;Acc:415938]
15. C1orf174 ENSGALG00000000975 4947 0.814 - - - - - - 0.814 - - - chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:HGNC:27915]
16. RPB6 RPB6 9517 0.809 - - - - - - 0.809 - - -
17. VWDE ENSGALG00000042443 160 0.807 - - 0.807 - - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
18. PTGR1 ENSGALG00000015702 3667 0.804 - - - - - - 0.804 - - - prostaglandin reductase 1 [Source:NCBI gene;Acc:427337]
19. FBXO5 ENSGALG00000013607 6156 0.801 - - - - - - 0.801 - - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
20. TMEM70 ENSGALG00000033568 10720 0.797 - - - - - - 0.797 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
21. CLTCL1 ENSGALG00000041760 9351 0.796 - - - - - - 0.796 - - - clathrin, heavy chain-like 1, transcript variant X6
22. TUBB2C TUBB2C 44249 0.796 - - - - - - 0.796 - - -
23. XRN2 ENSGALG00000008372 22164 0.793 - - - - - - 0.793 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
24. FAM199X ENSGALG00000008872 44 0.79 - - 0.790 - - - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
25. ENSGALG00000005723 ENSGALG00000005723 36 0.79 - - 0.790 - - - - - - -
26. MAU2 ENSGALG00000002969 10604 0.789 - - - - - - - 0.789 - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
27. FSCN2 ENSGALG00000023354 13 0.788 - - 0.788 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
28. KCNK5 ENSGALG00000034077 3233 0.787 - - 0.787 - - - - - - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
29. FAM63B 3793 0.786 - - - - - - - 0.786 - - family with sequence similarity 63 member B
30. PDHB ENSGALG00000029576 12254 0.785 - - - - - - 0.785 - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
31. C15orf60 C15orf60 16 0.783 - - 0.783 - - - - - - -
32. ENSGALG00000028778 ENSGALG00000028778 47 0.782 - - 0.782 - - - - - - -
33. FAM3B ENSGALG00000016140 111 0.781 - - 0.781 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
34. WBSCR22 6082 0.78 - - - - - - - 0.780 - - Williams-Beuren syndrome chromosome region 22
35. ORC1 ENSGALG00000010623 2859 0.78 - - - - - - - 0.780 - - origin recognition complex subunit 1 [Source:NCBI gene;Acc:424640]
36. AHR2 ENSGALG00000023742 21 0.78 - - 0.780 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
37. EML5 ENSGALG00000010639 25 0.779 - - 0.779 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
38. RYBP ENSGALG00000033025 3019 0.778 - - - - - - 0.778 - - - RING1 and YY1 binding protein
39. PCTP ENSGALG00000003099 5851 0.778 - - - - - - 0.778 - - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
40. MAP3K8 ENSGALG00000007356 188 0.777 - - 0.777 - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
41. STXBP3 ENSGALG00000002001 1740 0.776 - - 0.776 - - - - - - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
42. CEP78 ENSGALG00000015179 5227 0.776 - - - - - - 0.776 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
43. NDUFAF7 ENSGALG00000010609 2765 0.776 - - - - - - - 0.776 - - NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:HGNC Symbol;Acc:HGNC:28816]
44. PRMT7 ENSGALG00000038865 2666 0.776 - - - - - - 0.776 - - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]
45. PCBP4 ENSGALG00000027695 7937 0.776 - - - - - - - 0.776 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
46. ATXN3 ENSGALG00000010766 48 0.775 - - 0.775 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
47. GLB1L2 ENSGALG00000001604 4057 0.775 - - - - - - 0.775 - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
48. XPO4 ENSGALG00000017132 2538 0.775 - - - - - - 0.775 - - - exportin 4 [Source:NCBI gene;Acc:428081]
49. CDC42BPB ENSGALG00000011432 8220 0.775 - - - - - - - 0.775 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
50. DSCR3 3583 0.774 - - - - - - - 0.774 - - DSCR3 arrestin fold containing, transcript variant X1
51. CZH9ORF80 CZH9ORF80 12760 0.773 - - - - - - 0.773 - - -
52. TOR1AIP1 ENSGALG00000029238 5843 0.773 - - - - - - 0.773 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
53. PRC1 ENSGALG00000012836 20 0.772 - - 0.772 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
54. KPNA5 ENSGALG00000014937 28 0.772 - - 0.772 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
55. GALNT11 ENSGALG00000006233 210 0.771 - - 0.771 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
56. FGFR1OP2 ENSGALG00000014084 1881 0.77 - - 0.770 - - - - - - - FGFR1 oncogene partner 2 [Source:NCBI gene;Acc:418214]
57. LLGL1 ENSGALG00000014408 15 0.77 - - 0.770 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
58. SUDS3 ENSGALG00000007393 8322 0.77 - - - - - - 0.770 - - - SDS3 homolog, SIN3A corepressor complex component [Source:NCBI gene;Acc:427713]
59. KDELC2 ENSGALG00000017158 479 0.769 - - 0.769 - - - - - - - KDEL motif containing 2 [Source:HGNC Symbol;Acc:HGNC:28496]
60. RBBP4 ENSGALG00000003522 72455 0.768 - - - - - - 0.768 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
61. PNPLA8 ENSGALG00000009505 2910 0.768 - - 0.768 - - - - - - - patatin like phospholipase domain containing 8 [Source:NCBI gene;Acc:417785]
62. ENSGALG00000005727 ENSGALG00000005727 4334 0.767 - - - - - - 0.767 - - -
63. MRPS31 ENSGALG00000017033 9287 0.766 - - - - - - 0.766 - - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
64. DPY30 ENSGALG00000010621 6818 0.766 - - - - - - - 0.766 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
65. CHP1 ENSGALG00000008569 6876 0.766 - - - - - - 0.766 - - - calcineurin like EF-hand protein 1 [Source:NCBI gene;Acc:423211]
66. SSX2IP ENSGALG00000008763 354 0.764 - - 0.764 - - - - - - - SSX family member 2 interacting protein [Source:NCBI gene;Acc:424532]
67. IP6K2 ENSGALG00000005701 12539 0.764 - - - - - - 0.764 - - - inositol hexakisphosphate kinase 2 [Source:NCBI gene;Acc:416010]
68. DNALI1 ENSGALG00000001996 64 0.764 - - 0.764 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
69. RPF2 ENSGALG00000037087 12788 0.763 - - - - - - 0.763 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
70. MRPL15 ENSGALG00000041086 16820 0.762 - - - - - - 0.762 - - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
71. TBC1D8B ENSGALG00000009040 75 0.762 - - 0.762 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
72. OTOA ENSGALG00000007070 94 0.762 - - 0.762 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
73. MRPL2 ENSGALG00000008597 16500 0.761 - - - - - - - 0.761 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
74. PRKCE ENSGALG00000010000 99 0.76 - - 0.760 - - - - - - - protein kinase C epsilon, transcript variant X1
75. ATG5 ENSGALG00000015387 7752 0.76 - - - - - - 0.760 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
76. SCNM1 ENSGALG00000046607 665 0.76 - - 0.760 - - - - - - - sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
77. BMP2K ENSGALG00000010885 37 0.759 - - 0.759 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
78. NFYC ENSGALG00000003189 7558 0.759 - - - - - - 0.759 - - - nuclear transcription factor Y subunit gamma [Source:HGNC Symbol;Acc:HGNC:7806]
79. ESD ENSGALG00000016991 11289 0.759 - - - - - - 0.759 - - - esterase D [Source:NCBI gene;Acc:418856]
80. INTS2 ENSGALG00000005269 6966 0.758 - - - - - - 0.758 - - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
81. PSMD9 ENSGALG00000004352 7284 0.758 - - - - - - - 0.758 - - proteasome 26S subunit, non-ATPase 9 [Source:NCBI gene;Acc:416853]
82. EPHA1 ENSGALG00000014687 174 0.758 - - 0.758 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
83. YWHAZ ENSGALG00000031387 84985 0.758 - - - - - - 0.758 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
84. ENSGALG00000002541 ENSGALG00000002541 2948 0.757 - - - - - - - 0.757 - -
85. NHLRC2 ENSGALG00000008946 387 0.757 - - 0.757 - - - - - - - NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
86. ILF2 ENSGALG00000011570 23050 0.756 - - - - - - 0.756 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
87. TTC27 ENSGALG00000010538 9685 0.756 - - - - - - 0.756 - - - tetratricopeptide repeat domain 27 [Source:NCBI gene;Acc:421462]
88. CREB3 ENSGALG00000002523 23 0.756 - - 0.756 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
89. PDZK1IP1 ENSGALG00000010473 551 0.756 - - 0.756 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
90. INTS12 ENSGALG00000010575 2976 0.756 - - - - - - 0.756 - - - integrator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:25067]
91. PHTF2 ENSGALG00000008335 722 0.756 - - 0.756 - - - - - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
92. ERBB2IP ERBB2IP 5800 0.756 - - - - - - 0.756 - - -
93. UBE2D1 ENSGALG00000021213 5876 0.755 - - - - - - 0.755 - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
94. RFC5 ENSGALG00000026517 26113 0.755 - - - - - - 0.755 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
95. CLASP2 ENSGALG00000032647 1821 0.753 - - 0.753 - - - - - - - cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:420724]
96. TSPAN5 ENSGALG00000012227 8703 0.753 - - - - - - 0.753 - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
97. SLC12A4 ENSGALG00000034179 5674 0.752 - - - - - - - 0.752 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
98. RNFT1 ENSGALG00000005205 2888 0.752 - - - - - - 0.752 - - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
99. MRPL53 ENSGALG00000037867 6100 0.752 - - - - - - 0.752 - - - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
100. DFFB ENSGALG00000036295 88 0.752 - - 0.752 - - - - - - - DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]

There are 236 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA