Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DHX38

Gene Name Gene ID Reads Annotation
DHX38 ENSGALG00000000787 6913 DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]











Genes with expression patterns similar to DHX38

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DHX38 ENSGALG00000000787 6913 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
2. AP2A2 ENSGALG00000006799 13874 2.362 - - - - - - 0.718 0.916 - 0.728 adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
3. TMEM237 ENSGALG00000008381 1317 1.735 - - - - - - - 0.864 - 0.871 transmembrane protein 237 [Source:NCBI gene;Acc:424084]
4. TAF7 4725 1.729 - - - - - - 0.828 0.901 - - TATA-box binding protein associated factor 7, transcript variant X1
5. PAXIP1 ENSGALG00000036064 3120 1.719 - - - - - - 0.776 0.943 - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
6. PCNP ENSGALG00000015330 15750 1.716 - - - - - - - 0.927 - 0.789 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
7. NUP153 ENSGALG00000012720 8079 1.708 - - - - - - - 0.933 - 0.775 nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
8. RAD50 ENSGALG00000006794 4308 1.698 - - - - - - - 0.911 - 0.787 RAD50 double strand break repair protein, transcript variant X4
9. SYAP1 ENSGALG00000016548 3347 1.694 - - - - - - 0.776 0.918 - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
10. MRPL50 ENSGALG00000015543 11649 1.684 - - - - - - 0.829 - - 0.855 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
11. MLX ENSGALG00000003199 5286 1.682 - - - - - - - 0.922 - 0.760 MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
12. C6ORF162 C6ORF162 4217 1.681 - - - - - - 0.769 0.912 - -
13. THUMPD3 ENSGALG00000008394 17711 1.67 - - - - - - 0.775 0.895 - - THUMP domain containing 3, transcript variant X2
14. YOD1 ENSGALG00000037597 2989 1.66 - - - - - - 0.736 0.924 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
15. HIBADH ENSGALG00000033207 3540 1.66 - - - - - - 0.721 0.939 - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
16. SH3GLB1 ENSGALG00000006284 12764 1.652 - - - - - - 0.723 0.929 - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
17. UBE2V1 ENSGALG00000008015 17947 1.65 - - - - - - 0.718 0.932 - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
18. TDRD3 ENSGALG00000016936 3412 1.646 - - - - - - 0.708 0.938 - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
19. SLC30A5 ENSGALG00000014787 5573 1.64 - - - - - - 0.762 - - 0.878 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
20. DNTTIP1 ENSGALG00000003575 4687 1.636 - - - - - - 0.719 0.917 - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
21. PRPSAP2 ENSGALG00000005064 5549 1.634 - - - - - - 0.717 0.917 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
22. UCHL3 ENSGALG00000016921 16208 1.631 - - - - - - 0.785 - - 0.846 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
23. CTNNBIP1 ENSGALG00000026306 8049 1.631 - - - - - - 0.708 0.923 - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
24. SMAD1 ENSGALG00000009977 3540 1.628 - - - - - - 0.737 0.891 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
25. SCML2 ENSGALG00000016537 9348 1.623 - - - - - - 0.714 0.909 - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
26. METTL23 ENSGALG00000001790 7906 1.622 - - - - - - 0.785 0.837 - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
27. KLHDC4 ENSGALG00000037315 9828 1.616 - - - - - - 0.794 0.822 - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
28. SEC24B ENSGALG00000035482 3430 1.609 - - - - - - 0.714 0.895 - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]
29. DAP3 ENSGALG00000019796 13278 1.608 - - - - - - 0.741 - - 0.867 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
30. SMC4 ENSGALG00000009553 15715 1.6 - - - - - - 0.787 - - 0.813 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
31. GGA.31975 GGA.31975 8825 1.588 - - - - - - 0.800 - - 0.788
32. NEO1 ENSGALG00000001774 10165 1.586 - - - - - - 0.721 - - 0.865 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
33. IFRD1 ENSGALG00000009448 8865 1.585 - - - - - 0.793 0.792 - - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
34. TMED7 ENSGALG00000028484 21008 1.582 - - - - - - - 0.762 - 0.820 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
35. ENSGALG00000009044 ENSGALG00000009044 14492 1.571 - - - - - - 0.742 - - 0.829
36. GORASP1 ENSGALG00000006033 4033 1.569 - - - - - - 0.758 - - 0.811 golgi reassembly stacking protein 1 [Source:NCBI gene;Acc:420426]
37. BIRC6 ENSGALG00000010541 7999 1.567 - - - - - - 0.752 0.815 - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
38. RAB10 ENSGALG00000016535 5272 1.561 - - - - - - 0.705 - - 0.856 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
39. SPTSSA ENSGALG00000025755 3361 1.558 - - - - - - 0.711 - - 0.847 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
40. SP3 ENSGALG00000031796 8997 1.558 - - - - - - 0.828 - - 0.730 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
41. COMMD7 ENSGALG00000006630 11491 1.554 - - - - - - 0.748 - - 0.806 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
42. KIF11 ENSGALG00000030597 5528 1.546 - - - - - - 0.740 - - 0.806 kinesin family member 11 [Source:NCBI gene;Acc:423809]
43. GSTAL2 ENSGALG00000028551 4899 1.546 - - - - - - 0.704 - - 0.842 glutathione S-transferase alpha-like 2, transcript variant X4
44. WASF1 ENSGALG00000015066 5628 1.544 - - - - - - 0.738 - - 0.806 WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
45. SNRNP40 ENSGALG00000000615 32298 1.543 - - - - - - 0.812 - - 0.731 small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
46. WFDC1 ENSGALG00000005503 6152 1.539 - - - - - - 0.750 - - 0.789 WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
47. SPDL1 ENSGALG00000001942 4403 1.526 - - - - - - 0.708 - - 0.818 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
48. UBL3 ENSGALG00000017084 7417 1.524 - - - - - - 0.729 - - 0.795 ubiquitin like 3 [Source:NCBI gene;Acc:418921]
49. ECI2 ENSGALG00000012809 3692 1.521 - - - - - - 0.760 - - 0.761 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
50. HSPA4 ENSGALG00000040882 20966 1.507 - - - - - - 0.748 - - 0.759 heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
51. TMX4 ENSGALG00000028587 3513 1.504 - - - - - - 0.702 - - 0.802 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
52. DMD ENSGALG00000016281 5657 1.503 - - - - - - 0.731 - - 0.772 dystrophin [Source:NCBI gene;Acc:396236]
53. CAMSAP1 ENSGALG00000001692 2617 1.499 - - - - - - 0.733 - - 0.766 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
54. ZRANB1 ENSGALG00000031474 3909 1.496 - - - - - - 0.753 - - 0.743 zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
55. RPA3 ENSGALG00000010700 6212 1.49 - - - - - - 0.779 - - 0.711 replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
56. TRRAP ENSGALG00000003596 6032 1.486 - - - - - - 0.754 - - 0.732 transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
57. TMX3 ENSGALG00000013757 6387 1.477 - - - - - - 0.754 - - 0.723 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
58. TAF15 ENSGALG00000002060 12320 1.442 - - - - - - 0.706 - - 0.736 TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
59. FNBP1L ENSGALG00000005850 9219 1.422 - - - - - - 0.715 - - 0.707 formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
60. GPR162 ENSGALG00000022926 7181 1.403 - - - - - - 0.703 - - 0.700 G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
61. NAP1L4 ENSGALG00000006446 10868 0.947 - - - - - - - 0.947 - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
62. CUL4B ENSGALG00000008559 16864 0.937 - - - - - - - 0.937 - - cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]
63. gga-mir-6683 ENSGALG00000026767 5682 0.937 - - - - - - - 0.937 - - gga-mir-6683 [Source:miRBase;Acc:MI0022504]
64. PDZRN3 ENSGALG00000007819 4139 0.937 - - - - - - - 0.937 - - PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]
65. SFSWAP ENSGALG00000002487 9977 0.929 - - - - - - - 0.929 - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
66. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.929 - - - - - - - 0.929 - -
67. SCCPDH ENSGALG00000010641 8624 0.928 - - - - - - - 0.928 - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
68. PLRG1 ENSGALG00000009257 8613 0.927 - - - - - - - 0.927 - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
69. THAP5 ENSGALG00000009494 6540 0.926 - - - - - - - 0.926 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
70. DNAJC15 ENSGALG00000016965 9163 0.926 - - - - - - - 0.926 - - DnaJ heat shock protein family (Hsp40) member C15 [Source:NCBI gene;Acc:418838]
71. RNF166 ENSGALG00000007272 7154 0.923 - - - - - - - 0.923 - - ring finger protein 166 [Source:NCBI gene;Acc:425360]
72. THYN1 ENSGALG00000001529 9423 0.923 - - - - - - - 0.923 - - thymocyte nuclear protein 1 [Source:NCBI gene;Acc:374161]
73. GID8 ENSGALG00000005700 3992 0.922 - - - - - - - 0.922 - - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
74. ARHGAP32 ENSGALG00000043511 7916 0.92 - - - - - - - 0.920 - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
75. ATRIP ENSGALG00000004670 3647 0.92 - - - - - - - 0.920 - - ATR interacting protein [Source:NCBI gene;Acc:415949]
76. WLS ENSGALG00000011238 20969 0.918 - - - - - - - 0.918 - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
77. SNX3 ENSGALG00000015304 1631 0.918 - - - - - - - 0.918 - - sorting nexin 3 [Source:NCBI gene;Acc:421772]
78. CEP78 ENSGALG00000015179 5227 0.917 - - - - - - - 0.917 - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
79. SKIV2L2 ENSGALG00000014709 2926 0.913 - - - - - - - 0.913 - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
80. HEATR6 ENSGALG00000005516 3347 0.911 - - - - - - - 0.911 - - HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
81. FZD6 ENSGALG00000030626 3336 0.91 - - - - - - - - - 0.910 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
82. WDR12 ENSGALG00000008470 7654 0.91 - - - - - - - 0.910 - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
83. SGPL1 ENSGALG00000004553 4520 0.91 - - - - - - - 0.910 - - sphingosine-1-phosphate lyase 1 [Source:NCBI gene;Acc:423714]
84. HSDL2 ENSGALG00000015663 8966 0.909 - - - - - - - 0.909 - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
85. SMPD4 ENSGALG00000006455 2270 0.909 - - - - - - - 0.909 - - sphingomyelin phosphodiesterase 4, transcript variant X1
86. UBXN2B ENSGALG00000030585 2177 0.908 - - - - - - - 0.908 - - UBX domain protein 2B [Source:NCBI gene;Acc:421135]
87. MOSPD1 ENSGALG00000006132 8503 0.908 - - - - - - - 0.908 - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
88. MED23 ENSGALG00000040607 5105 0.908 - - - - - - - 0.908 - - mediator complex subunit 23 [Source:HGNC Symbol;Acc:HGNC:2372]
89. RIPK1 ENSGALG00000012827 3405 0.906 - - - - - - - 0.906 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
90. ARL1 ENSGALG00000011651 3230 0.906 - - - - - - - 0.906 - - ADP ribosylation factor like GTPase 1 [Source:NCBI gene;Acc:417934]
91. SMAD2W ENSGALG00000014184 1773 0.905 - - - - - - - 0.905 - - SMAD family member 2-W, transcript variant X3
92. LRRFIP2 ENSGALG00000033102 8250 0.904 - - - - - - - 0.904 - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
93. EIF2D ENSGALG00000000856 8348 0.904 - - - - - - - 0.904 - - eukaryotic translation initiation factor 2D [Source:NCBI gene;Acc:419845]
94. PALD1 ENSGALG00000004465 3553 0.902 - - - - - - - 0.902 - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
95. SMU1 ENSGALG00000002014 8136 0.901 - - - - - - - 0.901 - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
96. NOL6 ENSGALG00000030730 7191 0.901 - - - - - - - 0.901 - - nucleolar protein 6
97. TMEM144 ENSGALG00000026253 1744 0.899 - - - - - - - 0.899 - - transmembrane protein 144 [Source:HGNC Symbol;Acc:HGNC:25633]
98. GATAD2A ENSGALG00000042900 6337 0.897 - - - - - - - 0.897 - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
99. AEN ENSGALG00000044204 2633 0.896 - - - - - - - 0.896 - - apoptosis enhancing nuclease, transcript variant X1
100. SPRYD7 ENSGALG00000017010 1910 0.896 - - - - - - - 0.896 - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]

There are 821 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA