Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DFFB

Gene Name Gene ID Reads Annotation
DFFB ENSGALG00000036295 88 DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]











Genes with expression patterns similar to DFFB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DFFB ENSGALG00000036295 88 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]
2. AHR2 ENSGALG00000023742 21 1.749 - - 0.975 - - - - - - 0.774 Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
3. EML5 ENSGALG00000010639 25 0.975 - - 0.975 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
4. OTOA ENSGALG00000007070 94 0.972 - - 0.972 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
5. ATXN3 ENSGALG00000010766 48 0.97 - - 0.970 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
6. C15orf60 C15orf60 16 0.97 - - 0.970 - - - - - - -
7. FSCN2 ENSGALG00000023354 13 0.968 - - 0.968 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
8. DNALI1 ENSGALG00000001996 64 0.965 - - 0.965 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
9. GALNT11 ENSGALG00000006233 210 0.964 - - 0.964 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
10. KPNA5 ENSGALG00000014937 28 0.963 - - 0.963 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
11. ENSGALG00000005723 ENSGALG00000005723 36 0.963 - - 0.963 - - - - - - -
12. PDZK1IP1 ENSGALG00000010473 551 0.96 - - 0.960 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
13. LLGL1 ENSGALG00000014408 15 0.96 - - 0.960 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
14. ENSGALG00000028778 ENSGALG00000028778 47 0.96 - - 0.960 - - - - - - -
15. EPHA1 ENSGALG00000014687 174 0.959 - - 0.959 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
16. TOX3 ENSGALG00000034649 54 0.955 - - 0.955 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
17. FAM3B ENSGALG00000016140 111 0.954 - - 0.954 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
18. FAM199X ENSGALG00000008872 44 0.954 - - 0.954 - - - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
19. PHTF2 ENSGALG00000008335 722 0.953 - - 0.953 - - - - - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
20. PRC1 ENSGALG00000012836 20 0.95 - - 0.950 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
21. SCNM1 ENSGALG00000046607 665 0.949 - - 0.949 - - - - - - - sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
22. ACSF3 ENSGALG00000035225 261 0.946 - - 0.946 - - - - - - - acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
23. ZZEF1 ENSGALG00000001546 767 0.945 - - 0.945 - - - - - - - zinc finger ZZ-type and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29027]
24. BMP2K ENSGALG00000010885 37 0.945 - - 0.945 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
25. CREB3 ENSGALG00000002523 23 0.942 - - 0.942 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
26. FANCB ENSGALG00000016569 1193 0.942 - - 0.942 - - - - - - - FA complementation group B [Source:NCBI gene;Acc:418628]
27. DLX6 ENSGALG00000023195 29 0.939 - - 0.939 - - - - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
28. CD300A CD300A 173 0.939 - - 0.939 - - - - - - -
29. DIXDC1 ENSGALG00000007929 67 0.935 - - 0.935 - - - - - - - DIX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23695]
30. PIP5K1C ENSGALG00000000784 492 0.935 - - 0.935 - - - - - - - Gallus gallus phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C), mRNA. [Source:RefSeq mRNA;Acc:NM_001319021]
31. PRKCE ENSGALG00000010000 99 0.935 - - 0.935 - - - - - - - protein kinase C epsilon, transcript variant X1
32. PKD2 ENSGALG00000010921 55 0.934 - - 0.934 - - - - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
33. CNKSR1 ENSGALG00000046299 195 0.933 - - 0.933 - - - - - - - connector enhancer of kinase suppressor of Ras 1 [Source:HGNC Symbol;Acc:HGNC:19700]
34. SCN5A ENSGALG00000006112 137 0.927 - - 0.927 - - - - - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
35. TBC1D8B ENSGALG00000009040 75 0.924 - - 0.924 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
36. TMEM132B ENSGALG00000002742 122 0.924 - - 0.924 - - - - - - - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
37. RAB11FIP1 41 0.923 - - 0.923 - - - - - - - RAB11 family interacting protein 1, transcript variant X2
38. SEC22C ENSGALG00000005268 1151 0.921 - - 0.921 - - - - - - - SEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
39. ALKBH8 ENSGALG00000017170 699 0.921 - - 0.921 - - - - - - - alkB homolog 8, tRNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:25189]
40. APH1A ENSGALG00000045163 146 0.92 - - 0.920 - - - - - - - aph-1 homolog A, gamma-secretase subunit [Source:HGNC Symbol;Acc:HGNC:29509]
41. KIDINS220 ENSGALG00000016409 854 0.919 - - 0.919 - - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
42. FMN2 ENSGALG00000031427 77 0.915 - - 0.915 - - - - - - - formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
43. CCDC135 CCDC135 220 0.915 - - 0.915 - - - - - - -
44. NUDT4 ENSGALG00000011285 2998 0.913 - - 0.913 - - - - - - - nudix hydrolase 4, transcript variant X5
45. MIS12 ENSGALG00000001632 372 0.91 - - 0.910 - - - - - - - MIS12, kinetochore complex component [Source:NCBI gene;Acc:693254]
46. gga-mir-6561 ENSGALG00000026650 135 0.908 - - 0.908 - - - - - - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
47. ENSGALG00000026925 ENSGALG00000026925 119 0.904 - - 0.904 - - - - - - -
48. VWDE ENSGALG00000042443 160 0.903 - - 0.903 - - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
49. PLXNB2 ENSGALG00000039861 338 0.903 - - 0.903 - - - - - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
50. ENSGALG00000011942 ENSGALG00000011942 175 0.903 - - 0.903 - - - - - - -
51. STXBP1 ENSGALG00000040003 157 0.903 - - 0.903 - - - - - - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
52. ENSGALG00000004127 ENSGALG00000004127 566 0.899 - - 0.899 - - - - - - -
53. FAM46A ENSGALG00000035903 891 0.897 - - 0.897 - - - - - - - family with sequence similarity 46 member A [Source:NCBI gene;Acc:421845]
54. THNSL1 ENSGALG00000007677 287 0.896 - - 0.896 - - - - - - - threonine synthase like 1 [Source:HGNC Symbol;Acc:HGNC:26160]
55. NHLRC2 ENSGALG00000008946 387 0.895 - - 0.895 - - - - - - - NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
56. RIPK4 ENSGALG00000040189 102 0.892 - - 0.892 - - - - - - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
57. DVL3 ENSGALG00000008414 38 0.89 - - 0.890 - - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
58. C1H11ORF70 ENSGALG00000017189 395 0.889 - - 0.889 - - - - - - - chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
59. KLF6 ENSGALG00000033178 679 0.885 - - 0.885 - - - - - - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
60. PRDM10 632 0.885 - - 0.885 - - - - - - - PR domain 10, transcript variant X10
61. GABRA1 ENSGALG00000001698 120 0.883 - - 0.883 - - - - - - - gamma-aminobutyric acid type A receptor alpha1 subunit [Source:NCBI gene;Acc:374214]
62. ZC4H2 ENSGALG00000042725 361 0.872 - - 0.872 - - - - - - - zinc finger C4H2-type containing, transcript variant X4
63. VTI1B ENSGALG00000009526 133 0.864 - - 0.864 - - - - - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
64. MTMR14 ENSGALG00000006601 1435 0.861 - - 0.861 - - - - - - - myotubularin related protein 14 [Source:NCBI gene;Acc:416048]
65. WDR5 ENSGALG00000002659 13008 0.861 - - 0.861 - - - - - - - WD repeat domain 5 [Source:NCBI gene;Acc:417144]
66. ABCC1 ENSGALG00000006646 2596 0.858 - - 0.858 - - - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
67. CNP1 ENSGALG00000028638 56 0.853 - - 0.853 - - - - - - - C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
68. FANCF ENSGALG00000003660 25 0.849 - - - - - - - 0.849 - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
69. C26H6ORF89 C26H6ORF89 1826 0.849 - - 0.849 - - - - - - -
70. CCDC51 ENSGALG00000006465 1845 0.848 - - 0.848 - - - - - - - coiled-coil domain containing 51, transcript variant X1
71. TEX264 ENSGALG00000003832 3053 0.848 - - 0.848 - - - - - - - testis expressed 264 [Source:NCBI gene;Acc:415938]
72. HPS3 ENSGALG00000040089 44 0.846 - - 0.846 - - - - - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
73. MST4 MST4 1931 0.842 - - 0.842 - - - - - - -
74. RMDN3 ENSGALG00000035242 680 0.842 - - 0.842 - - - - - - - regulator of microtubule dynamics 3 [Source:HGNC Symbol;Acc:HGNC:25550]
75. SIL1 ENSGALG00000002457 147 0.833 - - 0.833 - - - - - - - SIL1 nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:24624]
76. NUBPL ENSGALG00000009983 3328 0.832 - - 0.832 - - - - - - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
77. EXOC5 ENSGALG00000012105 23 0.83 - - - - - - 0.830 - - - exocyst complex component 5 [Source:NCBI gene;Acc:423549]
78. VPS53 ENSGALG00000042071 1158 0.83 - - 0.830 - - - - - - - VPS53, GARP complex subunit [Source:NCBI gene;Acc:417622]
79. CLEC3B ENSGALG00000030969 363 0.824 - - 0.824 - - - - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
80. C3H6ORF203 ENSGALG00000015316 513 0.822 - - 0.822 - - - - - - - chromosome 3 open reading frame, human C6orf203 [Source:NCBI gene;Acc:421779]
81. NHEJ1 ENSGALG00000011335 334 0.822 - - - - - - - 0.822 - - non-homologous end joining factor 1, transcript variant X3
82. HNRNPD ENSGALG00000011184 10686 0.821 - - 0.821 - - - - - - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
83. MMS22L ENSGALG00000015513 2089 0.821 - - 0.821 - - - - - - - MMS22 like, DNA repair protein [Source:HGNC Symbol;Acc:HGNC:21475]
84. FGFR1OP2 ENSGALG00000014084 1881 0.82 - - 0.820 - - - - - - - FGFR1 oncogene partner 2 [Source:NCBI gene;Acc:418214]
85. NRXN1 ENSGALG00000009107 277 0.819 - - 0.819 - - - - - - - neurexin 1 [Source:NCBI gene;Acc:395398]
86. ECHDC2 ENSGALG00000010647 4413 0.818 - - 0.818 - - - - - - - enoyl-CoA hydratase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23408]
87. RCAN1 ENSGALG00000016014 95 0.817 - - 0.817 - - - - - - - regulator of calcineurin 1 [Source:NCBI gene;Acc:418510]
88. TSPAN14 ENSGALG00000002414 69 0.815 - - 0.815 - - - - - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
89. DNAJB14 ENSGALG00000014026 598 0.812 - - 0.812 - - - - - - - DnaJ heat shock protein family (Hsp40) member B14 [Source:NCBI gene;Acc:426362]
90. ARFGEF1 ENSGALG00000034610 238 0.811 - - 0.811 - - - - - - - ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]
91. FOXN2 ENSGALG00000008942 468 0.81 - - 0.810 - - - - - - - forkhead box N2 [Source:NCBI gene;Acc:421288]
92. BRWD3 ENSGALG00000007151 3495 0.81 - - 0.810 - - - - - - - bromodomain and WD repeat domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17342]
93. HSPH1 ENSGALG00000017077 735 0.81 - - 0.810 - - - - - - - heat shock protein family H (Hsp110) member 1 [Source:NCBI gene;Acc:418917]
94. CPSF2 ENSGALG00000010783 5236 0.808 - - 0.808 - - - - - - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
95. RNF8 ENSGALG00000023256 5495 0.806 - - 0.806 - - - - - - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
96. ALG11 ENSGALG00000017022 619 0.805 - - 0.805 - - - - - - - ALG11, alpha-1,2-mannosyltransferase [Source:NCBI gene;Acc:418880]
97. SNED1 ENSGALG00000043596 693 0.804 - - 0.804 - - - - - - - sushi, nidogen and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:24696]
98. MKP3 MKP3 4418 0.804 - - 0.804 - - - - - - -
99. DUSP1 ENSGALG00000040360 2129 0.803 - - 0.803 - - - - - - - dual specificity phosphatase 1 [Source:NCBI gene;Acc:374192]
100. DYNLRB2 ENSGALG00000005402 630 0.802 - - 0.802 - - - - - - - dynein light chain roadblock-type 2 [Source:NCBI gene;Acc:415802]

There are 181 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA