Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DFFA

Gene Name Gene ID Reads Annotation
DFFA ENSGALG00000002820 2046 DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]











Genes with expression patterns similar to DFFA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DFFA ENSGALG00000002820 2046 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
2. EMG1 ENSGALG00000014568 8102 1.713 - - - - - - 0.734 0.979 - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
3. USP54 ENSGALG00000005232 2749 0.994 - - - - - - - 0.994 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
4. HSBP1 ENSGALG00000043039 2365 0.992 - - - - - - - 0.992 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
5. BET1 ENSGALG00000024485 2451 0.991 - - - - - - - 0.991 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
6. USP25 ENSGALG00000015693 2567 0.99 - - - - - - - 0.990 - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
7. C3H6ORF154 C3H6ORF154 1078 0.99 - - - - - - - 0.990 - -
8. NPHP3 ENSGALG00000034586 1465 0.99 - - - - - - - 0.990 - - nephrocystin 3, transcript variant X1
9. RAB35 ENSGALG00000007308 6300 0.99 - - - - - - - 0.990 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
10. TBC1D32 ENSGALG00000014876 681 0.99 - - - - - - - 0.990 - - TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
11. RGCC ENSGALG00000016954 1282 0.989 - - - - - - - 0.989 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
12. ACSBG2 ENSGALG00000001749 1681 0.989 - - - - - - - 0.989 - - acyl-CoA synthetase bubblegum family member 2 [Source:NCBI gene;Acc:420090]
13. IRF2BPL ENSGALG00000041616 2835 0.988 - - - - - - - 0.988 - - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
14. RPP38 ENSGALG00000008794 1057 0.988 - - - - - - - 0.988 - - ribonuclease P/MRP subunit p38 [Source:NCBI gene;Acc:420530]
15. ENSGALG00000012564 ENSGALG00000012564 426 0.988 - - - - - - - 0.988 - -
16. SLC38A11 ENSGALG00000011052 386 0.988 - - - - - - - 0.988 - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
17. MAN2A2 ENSGALG00000033790 2717 0.988 - - - - - - - 0.988 - - mannosidase alpha class 2A member 2 [Source:HGNC Symbol;Acc:HGNC:6825]
18. EIF2A ENSGALG00000010401 2201 0.988 - - - - - - - 0.988 - - eukaryotic translation initiation factor 2A [Source:NCBI gene;Acc:425042]
19. MSC ENSGALG00000037777 1109 0.988 - - - - - - - 0.988 - - musculin [Source:HGNC Symbol;Acc:HGNC:7321]
20. CA9 ENSGALG00000021340 1431 0.988 - - - - - - - 0.988 - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
21. CTTN ENSGALG00000007700 709 0.988 - - - - - - - 0.988 - - cortactin [Source:NCBI gene;Acc:396455]
22. GCN1L1 GCN1L1 4601 0.988 - - - - - - - 0.988 - -
23. HES5 ENSGALG00000001141 6514 0.988 - - - - - - - 0.988 - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
24. WDFY1 ENSGALG00000005158 2512 0.987 - - - - - - - 0.987 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
25. UTP20 ENSGALG00000011643 3012 0.987 - - - - - - - 0.987 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
26. GOLGA1 ENSGALG00000001025 334 0.987 - - - - - - - 0.987 - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
27. TATDN1 ENSGALG00000041072 1585 0.987 - - - - - - - 0.987 - - TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
28. ITPR1 ENSGALG00000008294 1226 0.987 - - - - - - - 0.987 - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
29. SLC16A2 ENSGALG00000007748 446 0.987 - - - - - - - 0.987 - - Gallus gallus solute carrier family 16 member 2 (SLC16A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321737]
30. APC ENSGALG00000000220 1266 0.987 - - - - - - - 0.987 - - APC, WNT signaling pathway regulator, transcript variant X12
31. OXSR1 ENSGALG00000005979 2905 0.987 - - - - - - - 0.987 - - oxidative stress responsive 1
32. CCM2 ENSGALG00000005612 323 0.987 - - - - - - - 0.987 - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
33. AP1S2 ENSGALG00000016551 421 0.987 - - - - - - - 0.987 - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
34. PIGG ENSGALG00000015349 314 0.987 - - - - - - - 0.987 - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
35. TMF1 ENSGALG00000013408 3344 0.987 - - - - - - - 0.987 - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
36. LONRF2 ENSGALG00000016768 193 0.987 - - - - - - - 0.987 - - LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
37. MSANTD1 ENSGALG00000015628 154 0.987 - - - - - - - 0.987 - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
38. ATG13 ENSGALG00000008347 7374 0.986 - - - - - - - 0.986 - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
39. TMEM135 2283 0.986 - - - - - - - 0.986 - - transmembrane protein 135, transcript variant X4
40. BFAR ENSGALG00000003111 1778 0.985 - - - - - - - 0.985 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
41. LPAR1 ENSGALG00000015729 3874 0.985 - - - - - - - 0.985 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
42. KIAA1191 ENSGALG00000003370 2599 0.985 - - - - - - - 0.985 - - KIAA1191 [Source:NCBI gene;Acc:416230]
43. RAB9A ENSGALG00000016579 3262 0.984 - - - - - - - 0.984 - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
44. TMEM168 ENSGALG00000009443 2452 0.984 - - - - - - - 0.984 - - transmembrane protein 168, transcript variant X1
45. JARID2 ENSGALG00000012702 4280 0.983 - - - - - - - 0.983 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
46. CDC7 ENSGALG00000006051 3996 0.982 - - - - - - - 0.982 - - cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
47. MGAT4B ENSGALG00000005924 2663 0.981 - - - - - - - 0.981 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
48. KLF5 ENSGALG00000016927 1080 0.981 - - - - - - - 0.981 - - Kruppel like factor 5 [Source:HGNC Symbol;Acc:HGNC:6349]
49. SFRP2 ENSGALG00000009241 4716 0.981 - - - - - - - 0.981 - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
50. FBXO28 ENSGALG00000009331 2871 0.979 - - - - - - - 0.979 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
51. COPG2 ENSGALG00000008144 4542 0.978 - - - - - - - 0.978 - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
52. OSR2 ENSGALG00000037695 2010 0.977 - - - - - - - 0.977 - - odd-skipped related transciption factor 2 [Source:NCBI gene;Acc:771523]
53. CXorf56 ENSGALG00000008652 7848 0.976 - - - - - - - 0.976 - - chromosome X open reading frame 56 [Source:HGNC Symbol;Acc:HGNC:26239]
54. UBR2 ENSGALG00000009906 7717 0.976 - - - - - - - 0.976 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
55. PMPCB ENSGALG00000008280 6357 0.976 - - - - - - - 0.976 - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
56. MYBBP1A ENSGALG00000001363 10331 0.975 - - - - - - - 0.975 - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
57. NFU1 ENSGALG00000030200 6882 0.974 - - - - - - - 0.974 - - NFU1 iron-sulfur cluster scaffold [Source:NCBI gene;Acc:419513]
58. HSD17B2 ENSGALG00000005467 275 0.973 - - - - - - - 0.973 - - hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]
59. ACOT13 ENSGALG00000013632 5550 0.97 - - - - - - - 0.970 - - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
60. SIGMAR1 ENSGALG00000028996 12267 0.969 - - - - - - - 0.969 - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
61. AP3S1 ENSGALG00000002341 12388 0.968 - - - - - - - 0.968 - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
62. AFAP1L2 ENSGALG00000008999 1305 0.966 - - - - - - - 0.966 - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
63. TGS1 ENSGALG00000015340 5897 0.963 - - - - - - - 0.963 - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
64. WDR36 ENSGALG00000000247 11277 0.962 - - - - - - - 0.962 - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
65. CDC23 ENSGALG00000007610 11945 0.961 - - - - - - - 0.961 - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
66. HECTD1 ENSGALG00000009946 1946 0.958 - - - - - - - 0.958 - - HECT domain E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20157]
67. LMAN2 ENSGALG00000033232 11740 0.956 - - - - - - - 0.956 - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
68. LYPD6B ENSGALG00000028759 831 0.955 - - - - - - - 0.955 - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
69. WDR11 ENSGALG00000035013 3393 0.952 - - - - - - - 0.952 - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
70. DDX47 ENSGALG00000011794 4255 0.95 - - - - - - - 0.950 - - DEAD-box helicase 47 [Source:NCBI gene;Acc:417959]
71. BPTF ENSGALG00000038222 7521 0.948 - - - - - - - 0.948 - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
72. CYP51A1 ENSGALG00000009365 6996 0.948 - - - - - - - 0.948 - - cytochrome P450 family 51 subfamily A member 1 [Source:NCBI gene;Acc:420548]
73. LATS1 ENSGALG00000012386 3455 0.947 - - - - - - - 0.947 - - large tumor suppressor kinase 1 [Source:HGNC Symbol;Acc:HGNC:6514]
74. DOCK7 6385 0.946 - - - - - - - 0.946 - - dedicator of cytokinesis 7, transcript variant X3
75. MRPS36 ENSGALG00000014789 7584 0.944 - - - - - - - 0.944 - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
76. UPK3BL ENSGALG00000001885 1650 0.943 - - - - - - - 0.943 - - uroplakin 3B-like
77. FAM49B ENSGALG00000036490 7984 0.942 - - - - - - - 0.942 - - family with sequence similarity 49 member B [Source:HGNC Symbol;Acc:HGNC:25216]
78. CEPT1 ENSGALG00000000142 4219 0.942 - - - - - - - 0.942 - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
79. RPN2 ENSGALG00000003815 18864 0.938 - - - - - - - 0.938 - - ribophorin II [Source:NCBI gene;Acc:419177]
80. MED30 ENSGALG00000030862 7163 0.934 - - - - - - - 0.934 - - mediator complex subunit 30 [Source:NCBI gene;Acc:420284]
81. FAM162A ENSGALG00000007378 8290 0.928 - - - - - - - 0.928 - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
82. FBXO30 ENSGALG00000041684 3033 0.923 - - - - - - - 0.923 - - F-box protein 30 [Source:HGNC Symbol;Acc:HGNC:15600]
83. RPA1 ENSGALG00000003072 8023 0.921 - - - - - - - 0.921 - - replication protein A1 [Source:NCBI gene;Acc:417563]
84. ENSGALG00000000514 ENSGALG00000000514 9906 0.912 - - - - - - - 0.912 - -
85. C6H10ORF32 C6H10ORF32 7694 0.908 - - - - - - - 0.908 - -
86. POGLUT1 ENSGALG00000015480 12290 0.895 - - - - - - - 0.895 - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
87. OLFML3 ENSGALG00000001956 28633 0.887 - - - - - - - 0.887 - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
88. ACTL6A ENSGALG00000009061 13013 0.883 - - - - - - - 0.883 - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
89. TMPO ENSGALG00000011504 14454 0.874 - - - - - - - 0.874 - - thymopoietin [Source:NCBI gene;Acc:417923]
90. NDUFA8 ENSGALG00000040987 49453 0.869 - - - - - - - 0.869 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
91. CRLS1 ENSGALG00000009214 8652 0.855 - - - - - - - 0.855 - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
92. H2B-V H2B-V 24 0.851 - - 0.851 - - - - - - -
93. LOC418544 ENSGALG00000019175 19 0.846 - - 0.846 - - - - - - - cystathionine beta-synthase-like
94. BDH1B ENSGALG00000006976 9 0.846 - - 0.846 - - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
95. CDC42SE1 ENSGALG00000028119 14813 0.844 - - - - - - - 0.844 - - CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
96. AIMP2 ENSGALG00000003400 12655 0.843 - - - - - - - 0.843 - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
97. PROSC 6856 0.842 - - - - - - - 0.842 - - proline synthetase cotranscribed homolog (bacterial), transcript variant X1
98. UBE3A ENSGALG00000034944 5196 0.841 - - - - - - - 0.841 - - ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:HGNC:12496]
99. WHSC2 WHSC2 3673 0.841 - - - - - - - 0.841 - -
100. STRAP ENSGALG00000013092 13100 0.838 - - - - - - - 0.838 - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]

There are 124 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA