Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for DEPDC7

Gene Name Gene ID Reads Annotation
DEPDC7 19 DEP domain containing 7, transcript variant X1










Genes with expression patterns similar to DEPDC7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. DEPDC7 19 7 1.000 - - 1.000 1.000 1.000 1.000 1.000 1.000 DEP domain containing 7, transcript variant X1
2. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 2 - - - - - 1.000 1.000 - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
3. CT573389.1 CT573389.1 26 1.977 - - - - - - 1.000 - 0.977
4. camk1db ENSDARG00000017446 47 1.959 - - - - - 0.959 1.000 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
5. si:dkey-222f2.1 ENSDARG00000043242 192 1.901 1.000 - - - - - 0.901 - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
6. FP103005.1 ENSDARG00000099852 4 1.859 - - - - - 0.859 1.000 - -
7. ccdc37 ccdc37 36 1.852 - - - - 0.993 0.859 - - -
8. si:ch73-191k20.4 37 1.816 - - - - - 1.000 - - 0.816 si:ch73-191k20.4, transcript variant X1
9. si:ch211-171b20.3 ENSDARG00000094794 2 1.774 0.774 - - - - 1.000 - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
10. ENSDARG00000089152 ENSDARG00000089152 12 1.774 0.774 - - - - 1.000 - - -
11. tpgs2 ENSDARG00000011926 48 1.736 0.736 - - - - 1.000 - - - tubulin polyglutamylase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040704-49]
12. fgf3 ENSDARG00000101540 75 1.718 - - - - 0.898 - 0.820 - - fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178]
13. pak1_1 ENSDARG00000103959 28 1.704 - - - - 0.704 1.000 - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
14. lingo4b ENSDARG00000078527 235 1.624 - - - - - 0.848 0.776 - - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
15. ispd ENSDARG00000005034 173 1.602 - - - - 0.781 - 0.821 - - isoprenoid synthase domain containing [Source:ZFIN;Acc:ZDB-GENE-061110-16]
16. wu:fc17b08 ENSDARG00000094249 427 1.556 0.826 - - - 0.730 - - - - wu:fc17b08 [Source:ZFIN;Acc:ZDB-GENE-030131-2746]
17. loxl5b ENSDARG00000076904 468 1.523 - - - - 0.765 - 0.758 - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
18. SPAG16 7 1.513 0.774 - - - 0.739 - - - - sperm associated antigen 16
19. chst2b ENSDARG00000058585 33 1.491 - - - 0.729 - - - - 0.762 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
20. ENDOD1_4 ENDOD1_4 2 1 - - - - - 1.000 - - -
21. arhgef19 ENSDARG00000078853 17 1 - - - - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
22. zgc:92590 ENSDARG00000040282 13 1 1.000 - - - - - - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
23. elavl2 ENSDARG00000040732 44 1 - - - - - 1.000 - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
24. si:ch211-122l14.7 ENSDARG00000095576 5 1 - - - - - 1.000 - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
25. atp8b5a ENSDARG00000062040 1 1 - - - - - 1.000 - - - ATPase phospholipid transporting 8B5a [Source:ZFIN;Acc:ZDB-GENE-060531-48]
26. ZNF337_16 ZNF337_16 22 1 - - - - - - 1.000 - -
27. si:dkey-250k10.4 ENSDARG00000099751 2 1 - - - - - 1.000 - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
28. ppp6r2a ENSDARG00000045540 60 1 - - - - - - 1.000 - - protein phosphatase 6, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5428]
29. col5a2b ENSDARG00000024847 17 1 - - - - - 1.000 - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
30. FMN1 ENSDARG00000011975 2 1 - - - - - - 1.000 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
31. abcc9 ENSDARG00000015985 20 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
32. si:ch211-132b12.2 ENSDARG00000094946 15 1 - - - - - 1.000 - - - si:ch211-132b12.2 [Source:ZFIN;Acc:ZDB-GENE-050420-178]
33. FGFBP2 FGFBP2 16 1 - - - - - - 1.000 - -
34. si:dkey-31m5.3 ENSDARG00000110121 1 1 - - - - - - 1.000 - - si:dkey-31m5.3 [Source:ZFIN;Acc:ZDB-GENE-070912-515]
35. ngb ENSDARG00000053475, ENSDARG00000116651 33 1 - - - - - 1.000 - - - neuroglobin [Source:ZFIN;Acc:ZDB-GENE-011102-1]
36. epsti1 ENSDARG00000094578 33 1 - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:ZFIN;Acc:ZDB-GENE-081104-172]
37. si:ch211-113a14.15_1 2 1 - - - - - 1.000 - - - si:ch211-113a14.15
38. pi15b ENSDARG00000061292 1 1 - - - - - 1.000 - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
39. map3k12 ENSDARG00000103651 3 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 12 [Source:ZFIN;Acc:ZDB-GENE-040426-2436]
40. tacr1b ENSDARG00000102900 1 1 - - - - - - 1.000 - - tachykinin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-091117-17]
41. si:dkey-32n7.8 ENSDARG00000090630 0 1 - - - - - 1.000 - - - si:dkey-32n7.8 [Source:ZFIN;Acc:ZDB-GENE-121214-326]
42. RIC3 ENSDARG00000105549 3 1 - - - - - 1.000 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
43. si:ch211-226h7.4 si:ch211-226h7.4 0 1 - - - - - 1.000 - - -
44. si:dkey-250k15.4 ENSDARG00000092169 19 1 - - - - - 1.000 - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
45. tor2a ENSDARG00000100559, ENSDARG00000115324 58 1 - - - - - 1.000 - - - torsin family 2, member A [Source:ZFIN;Acc:ZDB-GENE-050913-60]
46. zgc:110434 21 1 - - - - - 1.000 - - - zgc:110434
47. CR854899.1 ENSDARG00000102357 8 1 - - - - - 1.000 - - -
48. si:ch211-220i18.4 ENSDARG00000030262 10 1 - - - 1.000 - - - - - si:ch211-220i18.4 [Source:ZFIN;Acc:ZDB-GENE-090312-151]
49. si:ch211-223g7.7 si:ch211-223g7.7 1 1 - - - - - 1.000 - - -
50. dapk3 ENSDARG00000074447 12 1 - - - 1.000 - - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
51. SLC38A9 ENSDARG00000032769 35 1 - - - 1.000 - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
52. GSTK1_2 GSTK1_2 8 1 - - - - - - 1.000 - -
53. HTR7 17 1 - - - - - 1.000 - - - 5-hydroxytryptamine receptor 7
54. vmhcl 119 1 - - - - - - 1.000 - - ventricular myosin heavy chain-like
55. C20H1orf95 C20H1orf95 12 1 - - - - - - 1.000 - -
56. si:ch1073-403i13.1 si:ch1073-403i13.1 1 1 - - - - - 1.000 - - -
57. AHNAK2 AHNAK2 33 1 - - - - - 1.000 - - -
58. zgc:162879 ENSDARG00000074163 6 1 - - - - - 1.000 - - - zgc:162879 [Source:ZFIN;Acc:ZDB-GENE-070424-92]
59. si:ch73-30l9.1 ENSDARG00000095891 42 1 - - - - - - 1.000 - - si:ch73-30l9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-132]
60. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - 1.000 - - - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
61. TMC2 TMC2 5 1 - - - - - 1.000 - - -
62. BX322608.1 ENSDARG00000111690 326 1 - - - - - - 1.000 - -
63. si:ch211-264e16.2 ENSDARG00000094415 4 1 - - - - - - 1.000 - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
64. EGR4_1 EGR4_1 14 1 - - - - - 1.000 - - -
65. veph veph 3 1 - - - - - 1.000 - - -
66. coch ENSDARG00000024032 7 1 - - - - - 1.000 - - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
67. si:ch211-218c6.9 si:ch211-218c6.9 40 1 - - - - - 1.000 - - -
68. si:dkey-247i3.1 ENSDARG00000076252 11 1 - - - - - 1.000 - - - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
69. CREM_1 CREM_1 9 1 - - - - - 1.000 - - -
70. CCDC23 CCDC23 54 1 1.000 - - - - - - - -
71. irx4b ENSDARG00000036051 54 1 - - - - - - 1.000 - - iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]
72. or125-4 ENSDARG00000095417 2 1 - - - - - 1.000 - - - odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94]
73. CABZ01036951.1 CABZ01036951.1 71 1 - - - - - 1.000 - - -
74. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 - - - - - - 1.000 - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
75. SNORA31 SNORA31 23 1 - - - - - - 1.000 - -
76. taar19o ENSDARG00000093266, ENSDARG00000116999 1 1 - - - - - - 1.000 - - trace amine associated receptor 19o [Source:ZFIN;Acc:ZDB-GENE-060414-13]
77. si:dkey-161j23.6 ENSDARG00000092347 0 1 - - - - - 1.000 - - - si:dkey-161j23.6 [Source:ZFIN;Acc:ZDB-GENE-091204-173]
78. BX469910.2 ENSDARG00000096127 6 1 - - - - - - 1.000 - -
79. si:dkey-257e4.5 si:dkey-257e4.5 3 1 - - - - - 1.000 - - -
80. CABZ01113978.1 CABZ01113978.1 1 1 - - - - - 1.000 - - -
81. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1 - - - - - 1.000 - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
82. cs_1 ENSDARG00000103364 2 1 - - - - - - 1.000 - - citrate synthase [Source:ZFIN;Acc:ZDB-GENE-030131-1058]
83. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - - - - 1.000 - - -
84. aven ENSDARG00000002894 49 1 - - - - - 1.000 - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
85. tti2 ENSDARG00000073773 19 1 - - - - - 1.000 - - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
86. diaph2 ENSDARG00000076060 26 1 - - - - - - 1.000 - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
87. zgc:113098 zgc:113098 22 1 - - - - - - 1.000 - -
88. pacrg ENSDARG00000087556 25 1 - - - - - - 1.000 - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
89. fbxo43 ENSDARG00000104186 40 1 - - - - - 1.000 - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
90. col28a1 col28a1 5 1 - - - - - - 1.000 - -
91. PPFIBP1 PPFIBP1 46 1 - - - - - 1.000 - - -
92. carm1l ENSDARG00000091531 13 1 - - - - - 1.000 - - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
93. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - - 1.000 - - -
94. CABZ01040055.1 ENSDARG00000116837 2 1 - - - 1.000 - - - - - three-finger protein 5 [Source:NCBI gene;Acc:100003647]
95. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - - 1.000 - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
96. si:dkey-246j7.1 ENSDARG00000095559 4 1 - - - - - - 1.000 - - si:dkey-246j7.1 [Source:ZFIN;Acc:ZDB-GENE-050419-230]
97. CU183952.2 CU183952.2 6 1 - - - - - - 1.000 - -
98. BX294653.4 BX294653.4 1 1 - - - - - 1.000 - - -
99. si:ch73-335d12.1 si:ch73-335d12.1 1 1 - - - - - 1.000 - - -
100. tlr1 ENSDARG00000100649 2 1 - - - - - 1.000 - - - toll-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040220-1]

There are 709 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA