Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for DEPDC1B

Gene Name Gene ID Reads Annotation
DEPDC1B ENSGALG00000014729 5334 DEP domain containing 1B [Source:NCBI gene;Acc:427152]











Genes with expression patterns similar to DEPDC1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DEPDC1B ENSGALG00000014729 5334 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 DEP domain containing 1B [Source:NCBI gene;Acc:427152]
2. C1D ENSGALG00000008765 14779 1.807 - - - - - - 0.997 0.810 - - C1D nuclear receptor corepressor [Source:NCBI gene;Acc:421267]
3. DCK ENSGALG00000028501 8675 1.745 - - - - - - - 0.992 - 0.753 deoxycytidine kinase [Source:NCBI gene;Acc:422648]
4. HPS4 ENSGALG00000005595 2217 1.719 - - - - - - - 0.993 - 0.726 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
5. GRPEL1 ENSGALG00000015549 11246 1.634 - - - - - - - 0.912 - 0.722 GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
6. KIF3A ENSGALG00000006860 6209 1.624 - - - - 0.752 - - 0.872 - - kinesin family member 3A [Source:NCBI gene;Acc:416332]
7. MCFD2 ENSGALG00000010017 8905 1.594 - - - - - - - 0.872 - 0.722 multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
8. RNF220 ENSGALG00000010109 3114 1.574 - - - - - - - 0.844 - 0.730 ring finger protein 220 [Source:NCBI gene;Acc:424580]
9. TWF2 ENSGALG00000003977 6597 1.515 - - - - 0.745 - - - - 0.770 twinfilin actin binding protein 2 [Source:NCBI gene;Acc:415940]
10. HSD17B12 ENSGALG00000036787 11748 1 - - - - - - 1.000 - - - hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
11. GALT ENSGALG00000026195 2002 0.999 - - - - - - 0.999 - - - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
12. GATAD2A ENSGALG00000042900 6337 0.999 - - - - - - 0.999 - - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
13. TOPBP1 ENSGALG00000034461 3094 0.999 - - - - - - 0.999 - - - DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
14. SLBP ENSGALG00000015712 5586 0.999 - - - - - - 0.999 - - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
15. UGCG ENSGALG00000015682 2735 0.999 - - - - - - 0.999 - - - UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:12524]
16. RALBP1 ENSGALG00000008405 13780 0.999 - - - - - - 0.999 - - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
17. SMPD3 ENSGALG00000034950 4335 0.999 - - - - - - 0.999 - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
18. CHKA ENSGALG00000036754 5077 0.999 - - - - - - 0.999 - - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
19. IGDCC3 ENSGALG00000007371 2434 0.999 - - - - - - 0.999 - - - immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
20. RBM45 ENSGALG00000009202 6057 0.999 - - - - - - 0.999 - - - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
21. RBM18 ENSGALG00000028167 10372 0.999 - - - - - - 0.999 - - - RNA binding motif protein 18 [Source:HGNC Symbol;Acc:HGNC:28413]
22. CKAP2 ENSGALG00000017025 25020 0.999 - - - - - - 0.999 - - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
23. PLOD2 ENSGALG00000006783 22789 0.998 - - - - - - 0.998 - - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
24. THOC5 ENSGALG00000029223 16069 0.998 - - - - - - 0.998 - - - THO complex 5 [Source:NCBI gene;Acc:417019]
25. DDX1 ENSGALG00000016461 15157 0.998 - - - - - - 0.998 - - - DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
26. APP ENSGALG00000015770 9438 0.998 - - - - - - 0.998 - - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
27. IRF6 ENSGALG00000001405 3144 0.998 - - - - - - 0.998 - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
28. DDOST ENSGALG00000010073 18707 0.997 - - - - - - 0.997 - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
29. UTP15 ENSGALG00000013510 13122 0.997 - - - - - - 0.997 - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
30. C28H19ORF10 C28H19ORF10 16529 0.997 - - - - - - 0.997 - - -
31. YWHAE ENSGALG00000002661 37143 0.995 - - - - - - 0.995 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:NCBI gene;Acc:417554]
32. PIGB ENSGALG00000037734 2193 0.993 - - - - - - - 0.993 - - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
33. NEO1 ENSGALG00000001774 10165 0.993 - - - - - - - 0.993 - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
34. HECTD3 ENSGALG00000010217 2513 0.993 - - - - - - 0.993 - - - HECT domain E3 ubiquitin protein ligase 3, transcript variant X2
35. RAB20 ENSGALG00000016844 3250 0.991 - - - - - - - 0.991 - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
36. TMEM200C ENSGALG00000030210 1434 0.99 - - - - - - - 0.990 - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
37. SFXN1 ENSGALG00000033956 2713 0.99 - - - - - - - 0.990 - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
38. LSM7 ENSGALG00000000408 19112 0.99 - - - - - - 0.990 - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
39. DIMT1 ENSGALG00000020569 5150 0.99 - - - - - - - 0.990 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
40. RAD52 ENSGALG00000039171 6989 0.989 - - - - - - - 0.989 - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
41. CCDC15 1759 0.989 - - - - - - - 0.989 - - coiled-coil domain containing 15
42. ZCCHC10 ENSGALG00000036666 5148 0.989 - - - - - - - 0.989 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
43. MIEN1 ENSGALG00000026328 3396 0.989 - - - - - - - 0.989 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
44. SIRT6 ENSGALG00000001245 3716 0.989 - - - - - - - 0.989 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
45. FSBP 3152 0.988 - - - - - - - 0.988 - - fibrinogen silencer binding protein
46. KCNK2 ENSGALG00000009687 1552 0.988 - - - - - - - 0.988 - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
47. RAC2 ENSGALG00000012456 987 0.988 - - - - - - - 0.988 - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
48. ENSGALG00000002852 ENSGALG00000002852 2687 0.988 - - - - - - - 0.988 - -
49. ATP11B ENSGALG00000008839 3455 0.988 - - - - - - - 0.988 - - ATPase phospholipid transporting 11B (putative), transcript variant X3
50. CNPY3 ENSGALG00000028471 1413 0.987 - - - - - - - 0.987 - - canopy FGF signaling regulator 3 [Source:HGNC Symbol;Acc:HGNC:11968]
51. BZW2 ENSGALG00000010809 29213 0.987 - - - - - - 0.987 - - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
52. ADAMTS6 ENSGALG00000014751 1293 0.987 - - - - - - - 0.987 - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
53. KIF1A ENSGALG00000006221 1989 0.987 - - - - - - - 0.987 - - kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
54. NKIRAS2 ENSGALG00000028971 3414 0.986 - - - - - - - 0.986 - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
55. TEX10 ENSGALG00000013438 3121 0.986 - - - - - - - 0.986 - - testis expressed 10 [Source:NCBI gene;Acc:420993]
56. ARHGEF18 ENSGALG00000003572 224 0.986 - - - - - - - 0.986 - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
57. SYNM ENSGALG00000007048 705 0.986 - - - - - - - 0.986 - - synemin [Source:NCBI gene;Acc:395599]
58. PRDM6 ENSGALG00000005351 2078 0.986 - - - - - - - 0.986 - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
59. FAXDC2 ENSGALG00000003972 172 0.986 - - - - - - - 0.986 - - fatty acid hydroxylase domain containing 2 [Source:NCBI gene;Acc:416256]
60. MYO9A ENSGALG00000033618 4505 0.986 - - - - - - - 0.986 - - myosin IXA, transcript variant X10
61. ENSGALG00000006278 ENSGALG00000006278 202 0.986 - - - - - - - 0.986 - -
62. EFR3B ENSGALG00000016605 234 0.986 - - - - - - - 0.986 - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
63. ACVR2B ENSGALG00000006158 8692 0.985 - - - - - - - 0.985 - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
64. AVENAII AVENAII 4552 0.985 - - - - - - - 0.985 - -
65. TNNI1 ENSGALG00000000313 4069 0.985 - - - - - - - 0.985 - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
66. SULF1 ENSGALG00000039553 5115 0.984 - - - - - - - 0.984 - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
67. IVD ENSGALG00000040267 5820 0.984 - - - - - - - 0.984 - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
68. MTFR2 ENSGALG00000019967 4436 0.984 - - - - - - - 0.984 - - mitochondrial fission regulator 2, transcript variant X1
69. BLCAP ENSGALG00000027126 12200 0.983 - - - - - - - 0.983 - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
70. DAB2 ENSGALG00000003803 6143 0.983 - - - - - - - 0.983 - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
71. TMEM26 ENSGALG00000025862 2222 0.982 - - - - - - - 0.982 - - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
72. TMEM60 ENSGALG00000008330 6303 0.982 - - - - - - - 0.982 - - transmembrane protein 60 [Source:NCBI gene;Acc:417727]
73. MRPL32 ENSGALG00000037258 6861 0.981 - - - - - - - 0.981 - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
74. CDKAL1 ENSGALG00000012677 4733 0.98 - - - - - - - 0.980 - - CDK5 regulatory subunit associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:21050]
75. SPR ENSGALG00000000067 3456 0.978 - - - - - - - 0.978 - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
76. NUDCD2 ENSGALG00000001726 6303 0.978 - - - - - - 0.978 - - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
77. COPS8 ENSGALG00000033385 10166 0.976 - - - - - - - 0.976 - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
78. NDUFA10 ENSGALG00000004302 41948 0.974 - - - - - - 0.974 - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:NCBI gene;Acc:424032]
79. TTC37 ENSGALG00000014670 5715 0.973 - - - - - - - 0.973 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
80. GNL2 ENSGALG00000001973 10148 0.969 - - - - - - - 0.969 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
81. ASNS ENSGALG00000009748 11822 0.967 - - - - - - 0.967 - - - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
82. BEND5 ENSGALG00000010505 3298 0.965 - - - - - - - 0.965 - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
83. CCDC104 CCDC104 6584 0.965 - - - - - - - 0.965 - -
84. GATC ENSGALG00000007195 8610 0.962 - - - - - - - 0.962 - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
85. STX2 ENSGALG00000002536 10438 0.961 - - - - - - - 0.961 - - syntaxin 2 [Source:NCBI gene;Acc:378895]
86. CCDC58 ENSGALG00000014413 9022 0.959 - - - - - - - 0.959 - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
87. LRRC59 ENSGALG00000007673 2081 0.959 - - - - - - - 0.959 - - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
88. NDUFB4 ENSGALG00000027688 8951 0.958 - - - - - - - 0.958 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
89. YIPF1 5945 0.955 - - - - - - - 0.955 - - Yip1 domain family member 1, transcript variant 4
90. AP5Z1 ENSGALG00000040528 4302 0.954 - - - - - - - 0.954 - - adaptor related protein complex 5 subunit zeta 1 [Source:HGNC Symbol;Acc:HGNC:22197]
91. RNF7 ENSGALG00000021117 13110 0.952 - - - - - - 0.952 - - - ring finger protein 7 [Source:NCBI gene;Acc:424781]
92. PREP ENSGALG00000015405 17050 0.949 - - - - - - - 0.949 - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
93. SUGT1 ENSGALG00000016946 22881 0.944 - - - - - - 0.944 - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
94. EVPL ENSGALG00000002108 591 0.943 - - - - - - - 0.943 - - envoplakin
95. KLHL18 ENSGALG00000005582 3053 0.942 - - - - - - - 0.942 - - kelch like family member 18 [Source:NCBI gene;Acc:420406]
96. MAGT1 ENSGALG00000007861 9105 0.942 - - - - - - - 0.942 - - magnesium transporter 1 [Source:NCBI gene;Acc:422332]
97. TM9SF2L ENSGALG00000006487 5566 0.94 - - - - - - - 0.940 - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
98. PDCD10 ENSGALG00000009477 7061 0.936 - - - - - - - 0.936 - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
99. SNRPA1 ENSGALG00000007170 17764 0.936 - - - - - - - 0.936 - - small nuclear ribonucleoprotein polypeptide A' [Source:NCBI gene;Acc:415523]
100. SNORA72 SNORA72 27695 0.935 - - - - - - - 0.935 - -

There are 389 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA