Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DEPDC1

Gene Name Gene ID Reads Annotation
DEPDC1 ENSGALG00000011275 1264 DEP domain containing 1 [Source:NCBI gene;Acc:424710]











Genes with expression patterns similar to DEPDC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DEPDC1 ENSGALG00000011275 1264 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEP domain containing 1 [Source:NCBI gene;Acc:424710]
2. MPV17 ENSGALG00000026239 1698 1.43 - - - - - - 0.706 - 0.724 - MPV17, mitochondrial inner membrane protein [Source:HGNC Symbol;Acc:HGNC:7224]
3. TLR4 ENSGALG00000007001 116 0.831 - - - - - - - - 0.831 - toll like receptor 4 [Source:NCBI gene;Acc:417241]
4. FYB ENSGALG00000003792 333 0.809 - - - - - - - - 0.809 - FYN binding protein [Source:NCBI gene;Acc:427448]
5. DINB1 DINB1 113 0.792 - - - - - - - - 0.792 -
6. MILR1 ENSGALG00000046212 7 0.778 - - - - 0.778 - - - - - mast cell immunoglobulin-like receptor 1, transcript variant X3
7. VLDL VLDL 13 0.778 - - - - 0.778 - - - - -
8. ADAM28 ENSGALG00000000357 57 0.778 - - - - - - - - 0.778 - ADAM metallopeptidase domain 28, transcript variant X2
9. TECPR1 ENSGALG00000003507 20 0.778 - - - - 0.778 - - - - - tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:22214]
10. SNX21 ENSGALG00000006836 5 0.778 - - - - 0.778 - - - - - sorting nexin family member 21 [Source:HGNC Symbol;Acc:HGNC:16154]
11. HOXA9 ENSGALG00000028983 9298 0.778 - - - - 0.778 - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
12. C2orf50 ENSGALG00000046449 17 0.778 - - - - 0.778 - - - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
13. SLC22A7 ENSGALG00000001661 9 0.778 - - - - 0.778 - - - - - solute carrier family 22 member 7 [Source:NCBI gene;Acc:416712]
14. SIX4 ENSGALG00000017389 10 0.778 - - - - 0.778 - - - - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
15. TAB3 ENSGALG00000016284 40 0.778 - - - - 0.778 - - - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30681]
16. MYLK3 ENSGALG00000004334 13 0.778 - - - - 0.778 - - - - - myosin light chain kinase 3 [Source:HGNC Symbol;Acc:HGNC:29826]
17. RC3H2 ENSGALG00000001253 18 0.778 - - - - 0.778 - - - - - ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
18. TMEM132D ENSGALG00000002671 12 0.778 - - - - 0.778 - - - - - transmembrane protein 132D, transcript variant X6
19. ENSGALG00000022155 ENSGALG00000022155 80 0.773 - - - - 0.773 - - - - -
20. ENSGALG00000013318 ENSGALG00000013318 8 0.773 - - - - 0.773 - - - - -
21. TNRC6C ENSGALG00000001725 215 0.769 - - - - - - - - 0.769 - trinucleotide repeat containing 6C [Source:HGNC Symbol;Acc:HGNC:29318]
22. NCX3 NCX3 16 0.766 - - - - 0.766 - - - - -
23. TMEM52B ENSGALG00000034698 169 0.761 - - - - 0.761 - - - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
24. PITPNM3 ENSGALG00000006034 335 0.759 - - - - - - - - 0.759 - PITPNM family member 3 [Source:HGNC Symbol;Acc:HGNC:21043]
25. DLAT ENSGALG00000007904 3297 0.757 - - - - - - - 0.757 - - dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2896]
26. TAPBPL ENSGALG00000014428 39 0.754 - - - - 0.754 - - - - - TAP binding protein like [Source:NCBI gene;Acc:426340]
27. ZMYM2 ENSGALG00000017139 3747 0.753 - - - - - - - 0.753 - - zinc finger MYM-type containing 2, transcript variant X10
28. AAGAB ENSGALG00000007887 142 0.753 - - - - - - - - 0.753 - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
29. ENSGALG00000010054 ENSGALG00000010054 81 0.752 - - - - 0.752 - - - - -
30. PCDH20 ENSGALG00000016934 187 0.751 - - - - - - - - - 0.751 protocadherin 20
31. K123 ENSGALG00000041978 16 0.751 - - - - 0.751 - - - - - K123 protein [Source:NCBI gene;Acc:395873]
32. EMCN EMCN 2637 0.749 - - - - - - - - 0.749 -
33. COL8A2 ENSGALG00000002298 27 0.744 - - - - 0.744 - - - - - collagen type VIII alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2216]
34. ENSGALG00000028328 ENSGALG00000028328 23 0.744 - - - - 0.744 - - - - -
35. ST3GAL5 ENSGALG00000033260 19 0.743 - - - - 0.743 - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:NCBI gene;Acc:407775]
36. ENSGALG00000026925 ENSGALG00000026925 119 0.742 - - - - - - - - 0.742 -
37. MGAT4C_1 ENSGALG00000000225, ENSGALG00000028360 327 0.74 - - - - - - - - - 0.740 MGAT4 family member C [Source:HGNC Symbol;Acc:HGNC:30871]
38. OCC-1 OCC-1 1887 0.739 - - - - - - - - - 0.739
39. DAPK1 ENSGALG00000012608 17 0.736 - - - - 0.736 - - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
40. ENSGALG00000000346 ENSGALG00000000346 130 0.734 - - - - 0.734 - - - - -
41. SHOC2 ENSGALG00000008771 2957 0.734 - - - - - - - 0.734 - - SHOC2, leucine rich repeat scaffold protein [Source:NCBI gene;Acc:423894]
42. CA5B ENSGALG00000005855 172 0.732 - - - - - - - - - 0.732 carbonic anhydrase 5B [Source:HGNC Symbol;Acc:HGNC:1378]
43. GGT1 ENSGALG00000006565 690 0.731 - - - - - - - - 0.731 - gamma-glutamyltransferase 1, transcript variant X11
44. TMEM156 ENSGALG00000024490 9 0.731 - - - - 0.731 - - - - - transmembrane protein 156, transcript variant X5
45. COX18 ENSGALG00000011626 474 0.727 - - - - - - - 0.727 - - cytochrome c oxidase assembly factor COX18 [Source:HGNC Symbol;Acc:HGNC:26801]
46. GP1BB ENSGALG00000021529 348 0.727 - - - - - - - - 0.727 - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
47. ENSGALG00000009344 ENSGALG00000009344 330 0.724 - - - - - - - - 0.724 -
48. ENSGALG00000021517 ENSGALG00000021517 7 0.723 - - - - 0.723 - - - - -
49. PRPS2 ENSGALG00000016592 165 0.721 - - - - 0.721 - - - - - phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
50. ACRC ACRC 2547 0.72 - - - - - - - - - 0.720
51. ZDHHC17 ENSGALG00000010253 2588 0.718 - - - - - - - 0.718 - - zinc finger DHHC-type containing 17 [Source:NCBI gene;Acc:417867]
52. TRERF1 ENSGALG00000009896 42 0.718 - - - - - - - - - 0.718 transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
53. HOXD8 ENSGALG00000037272 4338 0.717 - - - - 0.717 - - - - - homeobox D8 [Source:NCBI gene;Acc:396301]
54. RPAP2 ENSGALG00000005953 2085 0.717 - - - - - - - - - 0.717 RNA polymerase II associated protein 2 [Source:HGNC Symbol;Acc:HGNC:25791]
55. GXYLT2 ENSGALG00000007804 670 0.717 - - - - - - - - - 0.717 glucoside xylosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:33383]
56. HECW1 ENSGALG00000037193 24 0.717 - - - - 0.717 - - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:22195]
57. LYRM5 LYRM5 1269 0.716 - - - - - - 0.716 - - -
58. FLCN ENSGALG00000004816 4101 0.713 - - - - - - - 0.713 - - folliculin, transcript variant X1
59. CCND1 ENSGALG00000007555 6715 0.709 - - - - - - - 0.709 - - cyclin D1 [Source:NCBI gene;Acc:396341]
60. CEP95 ENSGALG00000003540 475 0.707 - - - - - - - - 0.707 - centrosomal protein 95 [Source:HGNC Symbol;Acc:HGNC:25141]
61. TBC1D5 ENSGALG00000011251 287 0.706 - - - - - - - - - 0.706 TBC1 domain family member 5 [Source:HGNC Symbol;Acc:HGNC:19166]
62. CDCA2 ENSGALG00000045842 2236 0.704 - - - - - - - - 0.704 - cell division cycle associated 2, transcript variant X3
63. PPM1G ENSGALG00000016513 1544 0.702 - - - - - - - - - 0.702 protein phosphatase, Mg2+/Mn2+ dependent 1G [Source:HGNC Symbol;Acc:HGNC:9278]
64. AEBP2 ENSGALG00000038026 133 0.701 - - - - 0.701 - - - - - AE binding protein 2 [Source:HGNC Symbol;Acc:HGNC:24051]
65. SHC1 ENSGALG00000039775 219 0.701 - - - - 0.701 - - - - - SHC adaptor protein 1 [Source:NCBI gene;Acc:395934]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA