Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DENR

Gene Name Gene ID Reads Annotation
DENR ENSGALG00000003795 30805 density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]











Genes with expression patterns similar to DENR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DENR ENSGALG00000003795 30805 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
2. ATP5MC1 ENSGALG00000001330 37766 1.857 - - - - 0.862 - 0.995 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
3. RBM6 ENSGALG00000035578 1690 1.802 - - - - 0.968 - - 0.834 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
4. RHOT1 ENSGALG00000003397 5149 1.789 - - - - 0.958 - - 0.831 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
5. LGALS1 ENSGALG00000012420 13993 1.775 - - - - 0.962 - - 0.813 - - galectin 1 [Source:NCBI gene;Acc:396491]
6. LZIC ENSGALG00000002616 9052 1.71 - - - - 0.974 - 0.736 - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
7. POLR2E ENSGALG00000002591 26405 1.699 - - - - 0.906 - 0.793 - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
8. MOB3A ENSGALG00000031729 9690 1.692 - - - - 0.707 - 0.985 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
9. BIRC5 ENSGALG00000008713 46856 1.638 - - - - 0.917 - - 0.721 - - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]
10. SMC2 ENSGALG00000015691 34013 0.991 - - - - - - 0.991 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
11. EIF3J ENSGALG00000008187 43570 0.99 - - - - - - 0.990 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
12. POLR2D ENSGALG00000002057 14548 0.989 - - - - - - 0.989 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
13. PFDN4 ENSGALG00000007792 26514 0.989 - - - - - - 0.989 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
14. FBN3 ENSGALG00000037625 23313 0.988 - - - - - - 0.988 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
15. IMP4 ENSGALG00000029152 11669 0.987 - - - - - - 0.987 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
16. ENSGALG00000004773 ENSGALG00000004773 10418 0.986 - - - - - - 0.986 - - -
17. FAM103A1 17380 0.985 - - - - - - 0.985 - - - family with sequence similarity 103 member A1, transcript variant X2
18. HOXD8 ENSGALG00000037272 4338 0.981 - - - - - - 0.981 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
19. M6PR ENSGALG00000031681 9442 0.981 - - - - - - 0.981 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
20. POLR1C ENSGALG00000010349 7059 0.981 - - - - - - 0.981 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
21. PRDX6 ENSGALG00000003053 17928 0.981 - - - - - - 0.981 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
22. DYNLL2 ENSGALG00000005522 17107 0.98 - - - - - - 0.980 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
23. CTU2 4818 0.978 - - - - - - 0.978 - - - cytosolic thiouridylase subunit 2, transcript variant X3
24. MRPL32 ENSGALG00000037258 6861 0.978 - - - - - - 0.978 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
25. PTBP2 ENSGALG00000005552 3443 0.976 - - - - - - 0.976 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
26. EGFLAM ENSGALG00000003726 4588 0.976 - - - - - - 0.976 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
27. KIF11 ENSGALG00000030597 5528 0.976 - - - - 0.976 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
28. ENSGALG00000014190 ENSGALG00000014190 5735 0.975 - - - - - - 0.975 - - -
29. TMEM97 ENSGALG00000005702 2037 0.975 - - - - - - 0.975 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
30. CAND1 4541 0.975 - - - - - - 0.975 - - - cullin associated and neddylation dissociated 1
31. TMEM120B ENSGALG00000004254 2819 0.975 - - - - - - 0.975 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
32. PSMG3 ENSGALG00000004203 11240 0.975 - - - - 0.975 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
33. ABCC10 2213 0.975 - - - - - - 0.975 - - - ATP binding cassette subfamily C member 10, transcript variant X10
34. TMEM62 ENSGALG00000009260 1170 0.974 - - - - - - 0.974 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
35. TMC1 ENSGALG00000015145 1180 0.974 - - - - - - 0.974 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
36. BMP3 ENSGALG00000035052 3260 0.974 - - - - - - 0.974 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
37. DDX21 ENSGALG00000004144 13105 0.974 - - - - - - 0.974 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
38. PHTF1 ENSGALG00000001845 3276 0.973 - - - - 0.973 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
39. DLD ENSGALG00000007931 11011 0.973 - - - - 0.973 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
40. WDR92 ENSGALG00000008760 3934 0.972 - - - - 0.972 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
41. NUP88 ENSGALG00000032280 9847 0.972 - - - - 0.972 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
42. UPF3B ENSGALG00000008618 12350 0.971 - - - - 0.971 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
43. MCM2 ENSGALG00000006037 13458 0.971 - - - - - - 0.971 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
44. PHGDH ENSGALG00000002988 6912 0.971 - - - - - - 0.971 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
45. WNK2 ENSGALG00000038850 4712 0.971 - - - - 0.971 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
46. SNX14 ENSGALG00000015831 2554 0.97 - - - - 0.970 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
47. TIMMDC1 ENSGALG00000024480 9337 0.97 - - - - 0.970 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
48. ACAT2 ENSGALG00000011659 12825 0.97 - - - - 0.970 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
49. UTP6 ENSGALG00000003260 4909 0.97 - - - - 0.970 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
50. ASAP2 ENSGALG00000016419 1393 0.97 - - - - 0.970 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
51. MRPL16 ENSGALG00000029419 8033 0.97 - - - - 0.970 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
52. YARS ENSGALG00000003563 11093 0.97 - - - - 0.970 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
53. HSF2 ENSGALG00000038420 5259 0.97 - - - - 0.970 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
54. MED8 ENSGALG00000009993 3095 0.97 - - - - 0.970 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
55. ANKRD9 ENSGALG00000011376 525 0.969 - - - - 0.969 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
56. PITHD1 ENSGALG00000003986 11470 0.969 - - - - 0.969 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
57. MARC1 ENSGALG00000009453 5675 0.969 - - - - 0.969 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
58. CALM_1 CALM_1 57812 0.969 - - - - - - 0.969 - - -
59. BRF1 ENSGALG00000011705 3406 0.969 - - - - 0.969 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
60. SDCBP ENSGALG00000015436 1228 0.969 - - - - 0.969 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
61. C9orf85 ENSGALG00000026001 4110 0.969 - - - - 0.969 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
62. ITGA1 ENSGALG00000014891 11378 0.969 - - - - - - 0.969 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
63. CDH3 5050 0.968 - - - - 0.968 - - - - - cadherin 3
64. PREP2 PREP2 238 0.968 - - - - 0.968 - - - - -
65. RALGDS ENSGALG00000003412 4478 0.968 - - - - 0.968 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
66. FNDC5 ENSGALG00000003567 3328 0.968 - - - - 0.968 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
67. PTK2B ENSGALG00000016564 406 0.968 - - - - 0.968 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
68. LOC426385 ENSGALG00000026301 2703 0.968 - - - - 0.968 - - - - - serine/threonine kinase 35-like, transcript variant X2
69. RAMP3 ENSGALG00000037246 1187 0.968 - - - - 0.968 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
70. SMG7 ENSGALG00000004667 707 0.968 - - - - 0.968 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
71. PRDM4 ENSGALG00000012619 876 0.968 - - - - 0.968 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
72. MYBL2 ENSGALG00000003503 15875 0.968 - - - - 0.968 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
73. HARS ENSGALG00000035080 11602 0.968 - - - - 0.968 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
74. GTF2H1 ENSGALG00000042340 1553 0.967 - - - - 0.967 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
75. BAHD1 ENSGALG00000033675 1779 0.967 - - - - 0.967 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
76. PBRM1 ENSGALG00000037455 6450 0.967 - - - - 0.967 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
77. RBM34 ENSGALG00000029915 5618 0.967 - - - - 0.967 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
78. NEK6 ENSGALG00000001118 20333 0.967 - - - - 0.967 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
79. IARS2 ENSGALG00000009566 4599 0.967 - - - - 0.967 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
80. STARD3NL ENSGALG00000033038 4851 0.967 - - - - 0.967 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
81. SAP30 ENSGALG00000036252 2032 0.967 - - - - 0.967 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
82. TMF1 ENSGALG00000013408 3344 0.967 - - - - 0.967 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
83. TSPO2 ENSGALG00000003212 5141 0.967 - - - - 0.967 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
84. SYNE1 ENSGALG00000013505 2324 0.966 - - - - 0.966 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
85. ETS1 ENSGALG00000001143 7284 0.966 - - - - 0.966 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
86. SRP19 ENSGALG00000000218 14207 0.966 - - - - 0.966 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
87. DLL1 ENSGALG00000011182 1613 0.966 - - - - 0.966 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
88. DGKZ ENSGALG00000008380 5389 0.965 - - - - 0.965 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
89. NDUFV1 ENSGALG00000042809 6222 0.965 - - - - 0.965 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
90. SRGAP1 ENSGALG00000009825 6753 0.965 - - - - 0.965 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
91. ENSGALG00000027854 ENSGALG00000027854 5007 0.964 - - - - 0.964 - - - - -
92. SLMO2 SLMO2 9207 0.964 - - - - 0.964 - - - - -
93. CDKN1B ENSGALG00000022980 4606 0.964 - - - - 0.964 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
94. COQ5 ENSGALG00000007185 5614 0.964 - - - - 0.964 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
95. EDNRA ENSGALG00000010013 2472 0.964 - - - - 0.964 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
96. RAD54B ENSGALG00000043597 1699 0.964 - - - - 0.964 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
97. MED21 ENSGALG00000027435 5766 0.963 - - - - 0.963 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
98. CDCA7 ENSGALG00000040833 7484 0.963 - - - - 0.963 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
99. ENSGALG00000006569 ENSGALG00000006569 2169 0.962 - - - - 0.962 - - - - -
100. SFXN5 ENSGALG00000016094 2678 0.962 - - - - 0.962 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]

There are 210 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA