Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for DENND5B

Gene Name Gene ID Reads Annotation
DENND5B 4077 DENN domain containing 5B, transcript variant X1











Genes with expression patterns similar to DENND5B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DENND5B 4077 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DENN domain containing 5B, transcript variant X1
2. PCDH8 ENSGALG00000036258 1945 3.766 - - 0.719 - 0.832 0.771 0.727 - - 0.717 protocadherin 8 [Source:NCBI gene;Acc:428065]
3. GNG10 ENSGALG00000015683 6905 3.3 - - 0.825 - 0.830 0.862 - - 0.783 - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
4. HES5 ENSGALG00000001141 6514 3.023 - - 0.774 - - 0.772 0.751 - - 0.726 hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
5. ZIC1 ENSGALG00000040532 6543 2.589 - - 0.911 - - 0.923 - - - 0.755 Zic family member 1 [Source:NCBI gene;Acc:374103]
6. SRGAP3 ENSGALG00000008378 4331 2.515 - - 0.784 - 0.829 0.902 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
7. ASTN1 ENSGALG00000004472 855 2.475 - - - - 0.815 0.890 - - - 0.770 astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
8. CERCAM ENSGALG00000004986 5158 2.45 - - 0.744 - 0.804 0.902 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
9. NSG1 ENSGALG00000015010 5829 2.439 - - - - - 0.925 - - 0.716 0.798 neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
10. RTN1 ENSGALG00000012006 2438 2.408 - - 0.721 - - 0.887 - - - 0.800 reticulon 1 [Source:NCBI gene;Acc:378791]
11. TUBB2B ENSGALG00000012821 41535 2.313 - - 0.754 - - 0.769 - - - 0.790 tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
12. HMP19 ENSGALG00000028602 1604 2.286 - - 0.788 - 0.781 - - - - 0.717 Gallus gallus HMP19 protein (HMP19), mRNA. [Source:RefSeq mRNA;Acc:NM_001326465]
13. CKB ENSGALG00000011511 2100 2.183 - - - - 0.739 0.730 - - - 0.714 creatine kinase B [Source:NCBI gene;Acc:396248]
14. PTPRZ1 ENSGALG00000040114 3410 2.181 - - 0.717 - - 0.760 0.704 - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
15. ZIC3 ENSGALG00000031144 863 1.832 - - - - 0.935 0.897 - - - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
16. NFASC ENSGALG00000031776 4264 1.802 - - - - - 0.809 - 0.993 - - neurofascin [Source:NCBI gene;Acc:419824]
17. DRAXIN ENSGALG00000004631 3122 1.769 - - 0.885 - - 0.884 - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
18. WNT4 ENSGALG00000041708 1277 1.759 - - 0.842 - - 0.917 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
19. NPAS3 ENSGALG00000029022 1950 1.718 - - 0.798 - - 0.920 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
20. FZD3 ENSGALG00000042308 3356 1.718 - - 0.793 - - 0.925 - - - - frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
21. ISM1 ENSGALG00000009042 196 1.696 - - - - 0.831 0.865 - - - - isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]
22. FABP7 ENSGALG00000038933 6780 1.693 - - - - - 0.857 - - - 0.836 fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
23. NEFM ENSGALG00000000317 6992 1.689 - - - - - 0.862 - - - 0.827 neurofilament medium [Source:NCBI gene;Acc:396206]
24. LFNG ENSGALG00000038515 5178 1.688 - - 0.815 - - 0.873 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
25. TRABD2A ENSGALG00000026395 704 1.667 - - - - 0.788 0.879 - - - - TraB domain containing 2A, transcript variant X3
26. MARCKSL1 ENSGALG00000032335 88728 1.609 - - - - - 0.837 - - - 0.772 MARCKS like 1 [Source:NCBI gene;Acc:770764]
27. ENSGALG00000022967 ENSGALG00000022967 240 1.606 - - 0.794 - - 0.812 - - - -
28. PLPPR1 ENSGALG00000015542 3179 1.605 - - - - 0.812 - - - - 0.793 phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
29. CXCR4 ENSGALG00000012357 1320 1.601 - - - - - 0.849 0.752 - - - C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
30. PAX3 ENSGALG00000030944 2987 1.581 - - 0.712 - - 0.869 - - - - paired box 3 [Source:NCBI gene;Acc:374127]
31. CRABP-I ENSGALG00000003193 67258 1.574 - - 0.756 - - 0.818 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
32. OPTC ENSGALG00000003554 3698 1.565 - - 0.752 - - 0.813 - - - - opticin [Source:NCBI gene;Acc:395130]
33. JAM2 ENSGALG00000015746 514 1.564 - - - - 0.843 0.721 - - - - junctional adhesion molecule 2 [Source:NCBI gene;Acc:418476]
34. IRX1 ENSGALG00000030991 1474 1.559 - - - - - 0.841 0.718 - - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
35. MAP2 ENSGALG00000002789 6597 1.553 - - - - - 0.766 - - - 0.787 microtubule associated protein 2, transcript variant X33
36. CRMP1B CRMP1B 18633 1.549 - - - - - - - 0.806 - 0.743
37. LASP-2 LASP-2 4415 1.534 - - - - - 0.820 0.714 - - -
38. MOXD1 ENSGALG00000002911 8523 1.531 - - - - - 0.777 0.754 - - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
39. BTBD17 ENSGALG00000023359 87 1.516 - - - - - 0.795 - - - 0.721 BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
40. NEFL ENSGALG00000000314 4883 1.515 - - - - - 0.756 - - - 0.759 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
41. SMPD3 ENSGALG00000034950 4335 1.513 - - - - - 0.759 - - - 0.754 sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
42. SLC35F1 ENSGALG00000029011 14728 1.512 - - - - - 0.778 0.734 - - - solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
43. MURC 3759 1.508 - - - - - 0.791 - - - 0.717 muscle related coiled-coil protein
44. Sep-03 Sep-03 109 1.506 - - - - - 0.708 - - - 0.798
45. GADD45_1 GADD45_1 1433 1.506 - - - - - 0.774 - - - 0.732
46. DACH1 ENSGALG00000037015 5648 1.457 - - - - - 0.702 - - - 0.755 dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
47. TAGLN3 ENSGALG00000015379 7865 1.451 - - 0.729 - - - - - - 0.722 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
48. PROCA1 668 1.45 - - 0.717 - - 0.733 - - - - protein interacting with cyclin A1
49. ANKRD17 ENSGALG00000011642 3192 0.995 - - - - - - - 0.995 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
50. ADARB1 ENSGALG00000007527 2480 0.995 - - - - - - - 0.995 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
51. FGFRL1 ENSGALG00000037525 1687 0.994 - - - - - - - 0.994 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
52. TECPR2 ENSGALG00000011373 1063 0.994 - - - - - - - 0.994 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
53. FBXW8 ENSGALG00000008207 1639 0.994 - - - - - - - 0.994 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
54. TMEM100 ENSGALG00000026465 1785 0.994 - - - - - - - 0.994 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
55. ENSGALG00000026930 ENSGALG00000026930 681 0.994 - - - - - - - 0.994 - -
56. SNCAIP ENSGALG00000005330 2425 0.994 - - - - - - - 0.994 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
57. RBM6 ENSGALG00000035578 1690 0.993 - - - - - - - 0.993 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
58. ZMYM4 ENSGALG00000002499 435 0.993 - - - - - - - 0.993 - - zinc finger MYM-type containing 4, transcript variant X1
59. PAX-6 PAX-6 2650 0.993 - - - - - - - 0.993 - -
60. DOCK8 481 0.993 - - - - - - - 0.993 - - dedicator of cytokinesis 8, transcript variant X1
61. H2AFY_1 ENSGALG00000040141 4895 0.993 - - - - - - - 0.993 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
62. PTPN11 ENSGALG00000004821 2658 0.993 - - - - - - - 0.993 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
63. VPS13B 2293 0.993 - - - - - - - 0.993 - - vacuolar protein sorting 13 homolog B
64. EPS15 ENSGALG00000010543 1598 0.992 - - - - - - - 0.992 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
65. PGS1 ENSGALG00000007181 3187 0.992 - - - - - - - 0.992 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
66. NAA50 ENSGALG00000033889 3551 0.992 - - - - - - - 0.992 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
67. gga-mir-1787 ENSGALG00000025542 1373 0.991 - - - - - - - 0.991 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
68. RPAP1 ENSGALG00000008624 3522 0.991 - - - - - - - 0.991 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
69. PPT1 ENSGALG00000003936 2540 0.991 - - - - - - - 0.991 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
70. EED ENSGALG00000014060 6467 0.99 - - - - - - - 0.990 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
71. MTRF1 ENSGALG00000016951 3983 0.989 - - - - - - - 0.989 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
72. KIAA1432 KIAA1432 1792 0.989 - - - - - - - 0.989 - -
73. FAS ENSGALG00000006351 461 0.989 - - - - - - - 0.989 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
74. MB21D1 2460 0.989 - - - - - - - 0.989 - - Mab-21 domain containing 1
75. PRORSD1P ENSGALG00000034854 2924 0.988 - - - - - - - 0.988 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
76. RIOK1 ENSGALG00000012795 4658 0.987 - - - - - - - 0.987 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
77. CMC1 ENSGALG00000025811 3939 0.987 - - - - - - - 0.987 - - C-X9-C motif containing 1
78. KCTD9 ENSGALG00000000275 3455 0.985 - - - - - - - 0.985 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
79. KDM4B ENSGALG00000034592 6711 0.984 - - - - - - - 0.984 - - lysine demethylase 4B, transcript variant X8
80. LIN7C ENSGALG00000012170 5043 0.984 - - - - - - - 0.984 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
81. KNOP1 ENSGALG00000002042 6251 0.984 - - - - - - - 0.984 - - lysine-rich nucleolar protein 1, transcript variant X1
82. ADD1 ENSGALG00000015664 6828 0.984 - - - - - - - 0.984 - - adducin 1 [Source:NCBI gene;Acc:422882]
83. ACAP2 ENSGALG00000007040 4182 0.983 - - - - - - - 0.983 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
84. DDHD1 ENSGALG00000012426 6068 0.982 - - - - - - - 0.982 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
85. QARS ENSGALG00000029980 4207 0.981 - - - - - - - 0.981 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
86. VRK1 ENSGALG00000011116 4524 0.979 - - - - - - - 0.979 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
87. C3H2ORF43 C3H2ORF43 5628 0.978 - - - - - - - 0.978 - -
88. RHOT1 ENSGALG00000003397 5149 0.977 - - - - - - - 0.977 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
89. PACSIN3 ENSGALG00000008231 5423 0.975 - - - - - - - 0.975 - - protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
90. MAK16 ENSGALG00000001663 7455 0.974 - - - - - - - 0.974 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
91. OMA1 ENSGALG00000010861 3328 0.973 - - - - - - - 0.973 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
92. ATP8B1 ENSGALG00000030834 521 0.969 - - - - - - - 0.969 - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
93. LMNB2 ENSGALG00000000470 4364 0.968 - - - - - - - 0.968 - - lamin B2 [Source:NCBI gene;Acc:396222]
94. HDHD2 ENSGALG00000034801 6373 0.964 - - - - - - - 0.964 - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
95. FAM192A ENSGALG00000021473 10213 0.964 - - - - - - - 0.964 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
96. LGALS1 ENSGALG00000012420 13993 0.964 - - - - - - - 0.964 - - galectin 1 [Source:NCBI gene;Acc:396491]
97. MED10 ENSGALG00000028336 9343 0.962 - - - - - - - 0.962 - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
98. ACADSB ENSGALG00000041417 7710 0.96 - - - - - - - 0.960 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
99. SNAPC5 ENSGALG00000007695 4117 0.96 - - - - - - - 0.960 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
100. FKBP15 ENSGALG00000008838 3677 0.959 - - - - - - - 0.959 - - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]

There are 160 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA