Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DEF8

Gene Name Gene ID Reads Annotation
DEF8 ENSGALG00000025712 790 differentially expressed in FDCP 8 homolog [Source:HGNC Symbol;Acc:HGNC:25969]











Genes with expression patterns similar to DEF8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DEF8 ENSGALG00000025712 790 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 differentially expressed in FDCP 8 homolog [Source:HGNC Symbol;Acc:HGNC:25969]
2. TRUB1 ENSGALG00000009091 1005 1.577 - - - 0.725 - - - - 0.852 - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
3. NOTCH2 ENSGALG00000002922 3272 1.459 - - - - - 0.755 - - 0.704 - notch 2 [Source:NCBI gene;Acc:374031]
4. SNORD38 SNORD38 537 0.926 - - - - - - - - 0.926 -
5. MRGBP ENSGALG00000005531 79 0.915 - - - - - - - - 0.915 - MRG domain binding protein [Source:HGNC Symbol;Acc:HGNC:15866]
6. ZC3HAV1 ENSGALG00000013911 162 0.914 - - - - - - - - 0.914 - zinc finger CCCH-type containing, antiviral 1 [Source:NCBI gene;Acc:426315]
7. PMEPA1 ENSGALG00000037780 349 0.903 - - - 0.903 - - - - - - prostate transmembrane protein, androgen induced 1 [Source:NCBI gene;Acc:428166]
8. CASKIN1 604 0.901 - - - - - - - - 0.901 - CASK interacting protein 1, transcript variant X4
9. FLII ENSGALG00000004997 623 0.9 - - - - - - - - 0.900 - FLII, actin remodeling protein [Source:NCBI gene;Acc:416515]
10. gga-mir-1306 ENSGALG00000025271 1231 0.897 - - - - - - - - 0.897 - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
11. COL24A1 ENSGALG00000006864 161 0.892 - - - - - - - - 0.892 - collagen type XXIV alpha 1 chain, transcript variant X4
12. TTLL12 ENSGALG00000014167 714 0.884 - - - - - - - - 0.884 - tubulin tyrosine ligase like 12 [Source:NCBI gene;Acc:418227]
13. IFI27L2 1365 0.868 - - - - - - - - 0.868 - interferon, alpha-inducible protein 27-like 2, transcript variant X4
14. FOXK1 ENSGALG00000004460 1483 0.856 - - - - - - - - 0.856 - forkhead box K1 [Source:HGNC Symbol;Acc:HGNC:23480]
15. GUCY1A3 718 0.854 - - - - - - - - 0.854 - guanylate cyclase 1 soluble subunit alpha, transcript variant X2
16. NCKAP5 ENSGALG00000012177, ENSGALG00000045368 266 0.849 - - - - - - - - 0.849 - NCK associated protein 5, transcript variant X8
17. CDK10 ENSGALG00000006144 2424 0.847 - - - - - - - - 0.847 - cyclin dependent kinase 10 [Source:NCBI gene;Acc:415840]
18. PLCXD3 ENSGALG00000014845 247 0.844 - - - - - - - - 0.844 - phosphatidylinositol specific phospholipase C X domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31822]
19. ERAP1 ENSGALG00000014684 713 0.842 - - - - - - - - 0.842 - endoplasmic reticulum aminopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:18173]
20. FAM46D 22 0.839 - - - - - - - 0.839 - - family with sequence similarity 46 member D
21. C7 ENSGALG00000014835 322 0.838 - - - - - - - - 0.838 - Gallus gallus complement C7 (C7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318402]
22. CD300A CD300A 173 0.837 - - - - - - - 0.837 - -
23. HAS2 ENSGALG00000029596 4192 0.835 - - - - - - - - 0.835 - hyaluronan synthase 2 [Source:NCBI gene;Acc:395594]
24. KLC1 ENSGALG00000011528 1621 0.835 - - - - - - - - 0.835 - kinesin light chain 1, transcript variant X6
25. NPM1 ENSGALG00000002197 24109 0.834 - - - - - - - - 0.834 - nucleophosmin [Source:NCBI gene;Acc:396203]
26. CCDC86 ENSGALG00000036935 5280 0.834 - - - - - - - - 0.834 - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
27. BICD1 ENSGALG00000012934 112 0.831 - - - - - - - - 0.831 - BICD cargo adaptor 1 [Source:HGNC Symbol;Acc:HGNC:1049]
28. MIB1 ENSGALG00000014974 3583 0.829 - - - - - - - - 0.829 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
29. AP4E1 2726 0.829 - - - - - - - - 0.829 - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
30. DYNC2H1 ENSGALG00000041814 1770 0.828 - - - - - - - - 0.828 - dynein cytoplasmic 2 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2962]
31. GOPC ENSGALG00000014902 352 0.825 - - - 0.825 - - - - - - golgi associated PDZ and coiled-coil motif containing, transcript variant X2
32. FLCN ENSGALG00000004816 4101 0.824 - - - - - - - - 0.824 - folliculin, transcript variant X1
33. CALCOCO2 ENSGALG00000001525 3121 0.823 - - - - - - - - 0.823 - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
34. NUAK1 ENSGALG00000012662 411 0.823 - - - - - - - - 0.823 - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
35. NT5C1B ENSGALG00000016471 1378 0.815 - - - - - - - - 0.815 - 5'-nucleotidase, cytosolic IB
36. AFTPH ENSGALG00000008828 21 0.815 - - - - - - - 0.815 - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
37. SLC10A7 ENSGALG00000010006 2064 0.815 - - - - - - - - 0.815 - solute carrier family 10 member 7 [Source:NCBI gene;Acc:422467]
38. RHOBTB3 ENSGALG00000014675 58 0.815 - - - - - - - 0.815 - - Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
39. FAM19A4 ENSGALG00000042228 1724 0.812 - - - - - - - - 0.812 - family with sequence similarity 19 member A4, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21591]
40. PLEKHH3 ENSGALG00000037269 875 0.811 - - - - - - - - 0.811 - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
41. ZDHHC8 ENSGALG00000002124 35 0.807 - - - 0.807 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
42. SMG7 ENSGALG00000004667 707 0.803 - - - 0.803 - - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
43. NUP160 ENSGALG00000043074 46 0.803 - - - 0.803 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
44. ZPBP2 ENSGALG00000013484 14 0.802 - - - 0.802 - - - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
45. HTR1E ENSGALG00000015826 11 0.802 - - - 0.802 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
46. NUP107 ENSGALG00000009934 2097 0.8 - - - 0.800 - - - - - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
47. gga-mir-454 ENSGALG00000033526 22 0.8 - - - 0.800 - - - - - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
48. CP ENSGALG00000030773 119 0.799 - - - 0.799 - - - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
49. KIAA1407 KIAA1407 252 0.798 - - - 0.798 - - - - - -
50. MTERFD3 MTERFD3 20 0.797 - - - 0.797 - - - - - -
51. ARF4 ENSGALG00000005622 50567 0.796 - - - - - - - - 0.796 - ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
52. TNFAIP2 ENSGALG00000011446 32 0.793 - - - 0.793 - - - - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
53. SMCR8 ENSGALG00000024082 44 0.792 - - - 0.792 - - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
54. BEGAIN ENSGALG00000011236 35 0.792 - - - 0.792 - - - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
55. VEPH1 ENSGALG00000009682 51 0.79 - - - 0.790 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
56. TRAF2 ENSGALG00000042838 24 0.79 - - - 0.790 - - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
57. CARHSP1 ENSGALG00000042981 6920 0.79 - - - - - - - - 0.790 - calcium regulated heat stable protein 1 [Source:HGNC Symbol;Acc:HGNC:17150]
58. ACOX2 ENSGALG00000007132 47 0.789 - - - 0.789 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
59. OXGR1 ENSGALG00000016891 13 0.789 - - - 0.789 - - - - - - oxoglutarate receptor 1
60. gga-mir-6681 ENSGALG00000027840 546 0.788 - - - - - - - - 0.788 - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
61. BRINP3 ENSGALG00000033407 40 0.787 - - - - - - 0.787 - - - BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
62. PHLDB1 ENSGALG00000040030 2423 0.785 - - - 0.785 - - - - - - pleckstrin homology like domain family B member 1 [Source:HGNC Symbol;Acc:HGNC:23697]
63. BRD1 ENSGALG00000029379 6047 0.785 - - - - - - - - 0.785 - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
64. SCARA5 ENSGALG00000016580 712 0.785 - - - - - - - 0.785 - - scavenger receptor class A member 5 [Source:HGNC Symbol;Acc:HGNC:28701]
65. EXOSC8 ENSGALG00000017048 2939 0.783 - - - - - - - - 0.783 - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
66. PLIN3 ENSGALG00000044632 370 0.783 - - - - - - - - 0.783 - perilipin 3, transcript variant X2
67. MATN2 44 0.782 - - - 0.782 - - - - - - matrilin 2, transcript variant X9
68. PTPRG ENSGALG00000007177 2341 0.782 - - - - - - - - 0.782 - protein tyrosine phosphatase, receptor type G [Source:NCBI gene;Acc:374208]
69. HERC1 ENSGALG00000003381 672 0.781 - - - - - - - - 0.781 - HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X8
70. RASGRP3 ENSGALG00000010435 19 0.78 - - - - - - - 0.780 - - RAS guanyl releasing protein 3 [Source:NCBI gene;Acc:421460]
71. SPICE1 ENSGALG00000045606 680 0.779 - - - - - - - - 0.779 - spindle and centriole associated protein 1, transcript variant X11
72. ENPEP ENSGALG00000031410 147 0.779 - - - - - - - 0.779 - - glutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]
73. RGS16 ENSGALG00000033535 139 0.779 - - - 0.779 - - - - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
74. ENSGALG00000028652 ENSGALG00000028652 65 0.778 - - - 0.778 - - - - - -
75. OGFOD3 ENSGALG00000001618 2438 0.777 - - - - - - - - 0.777 - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
76. HNRNPK ENSGALG00000012591 1109 0.777 - - - - - - - - 0.777 - heterogeneous nuclear ribonucleoprotein K, transcript variant X8
77. KCTD17 ENSGALG00000042419 90 0.774 - - - 0.774 - - - - - - potassium channel tetramerization domain containing 17 [Source:HGNC Symbol;Acc:HGNC:25705]
78. CYP4A22 ENSGALG00000020688 741 0.773 - - - 0.773 - - - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
79. MIA2 ENSGALG00000010189 1223 0.772 - - - - - - - - 0.772 - melanoma inhibitory activity 2, transcript variant X5
80. CLN5 ENSGALG00000016917 386 0.772 - - - - - - - - 0.772 - CLN5, intracellular trafficking protein [Source:NCBI gene;Acc:101752092]
81. COX11 ENSGALG00000027190 4475 0.772 - - - - - - - - 0.772 - cytochrome c oxidase copper chaperone COX11 [Source:HGNC Symbol;Acc:HGNC:2261]
82. ENSGALG00000027154 ENSGALG00000027154 617 0.772 - - - - - - - - 0.772 -
83. RFESD ENSGALG00000014673 198 0.77 - - - 0.770 - - - - - - Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
84. KITLG ENSGALG00000011206 71 0.767 - - - 0.767 - - - - - - KIT ligand [Source:NCBI gene;Acc:396028]
85. OTUD7B ENSGALG00000013348 38 0.767 - - - 0.767 - - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
86. THADA ENSGALG00000009932 2392 0.763 - - - - - - - - 0.763 - THADA, armadillo repeat containing [Source:NCBI gene;Acc:421398]
87. SORD ENSGALG00000031408 2119 0.762 - - - - - - - - 0.762 - sorbitol dehydrogenase [Source:NCBI gene;Acc:415332]
88. L3HYPDH ENSGALG00000012011 2212 0.762 - - - - - - - - 0.762 - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
89. TUBGCP2 ENSGALG00000003526 1005 0.761 - - - - - - - - 0.761 - tubulin gamma complex associated protein 2 [Source:NCBI gene;Acc:423673]
90. ZNF618 ENSGALG00000008886 1326 0.761 - - - - - - - - 0.761 - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
91. ZNF143 ENSGALG00000005787 345 0.76 - - - 0.760 - - - - - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
92. STAMBP ENSGALG00000042555 1362 0.758 - - - 0.758 - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
93. LCP1 ENSGALG00000016986 801 0.758 - - - - - - 0.758 - - - lymphocyte cytosolic protein 1 [Source:NCBI gene;Acc:418852]
94. HEATR1 ENSGALG00000032799 2305 0.755 - - - 0.755 - - - - - - HEAT repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:25517]
95. NOTCH1 ENSGALG00000002375 726 0.755 - - - 0.755 - - - - - - notch 1 [Source:NCBI gene;Acc:395655]
96. NCL ENSGALG00000032930 66655 0.752 - - - - - - - - 0.752 - nucleolin [Source:NCBI gene;Acc:396201]
97. RTCB ENSGALG00000012611 14360 0.752 - - - - - - - - 0.752 - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
98. RLBP1 ENSGALG00000006676 52 0.751 - - - - - - - - - 0.751 retinaldehyde binding protein 1 [Source:NCBI gene;Acc:415492]
99. ARHGEF5 ENSGALG00000017276 32 0.75 - - - 0.750 - - - - - - Rho guanine nucleotide exchange factor 5, transcript variant X5
100. VPS35 ENSGALG00000004375 8059 0.749 - - - - - - - - 0.749 - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]

There are 81 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA