Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DDX60

Gene Name Gene ID Reads Annotation
DDX60 27 DExD/H-box helicase 60, transcript variant X2











Genes with expression patterns similar to DDX60

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DDX60 27 4 - - 1.000 1.000 1.000 - - - - 1.000 DExD/H-box helicase 60, transcript variant X2
2. ENSGALG00000028102 ENSGALG00000028102 8 1.544 - - 0.802 - - - - - - 0.742
3. KLHL33 ENSGALG00000027742 18 1.529 - - 0.802 0.727 - - - - - - kelch like family member 33, transcript variant X2
4. IL17F ENSGALG00000016677 9 0.97 - - - - - - - - - 0.970 interleukin 17F
5. GP9 GP9 6 0.97 - - - - - - - - - 0.970
6. KL ENSGALG00000017068 21 0.97 - - - - - - - - - 0.970 klotho [Source:HGNC Symbol;Acc:HGNC:6344]
7. MYH1B ENSGALG00000039977 3 0.97 - - - - - - - - - 0.970 myosin, heavy chain 1B, skeletal muscle [Source:NCBI gene;Acc:374069]
8. LZTS3 ENSGALG00000016001 3 0.97 - - - - - - - - - 0.970 leucine zipper tumor suppressor family member 3 [Source:HGNC Symbol;Acc:HGNC:30139]
9. HHIPL2 ENSGALG00000045729 9 0.97 - - - - - - - - - 0.970 HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]
10. ADAM8 5 0.97 - - - - - - - - - 0.970 ADAM metallopeptidase domain 8, transcript variant X4
11. ENSGALG00000028061 ENSGALG00000028061 2 0.97 - - - - - - - - - 0.970
12. CACNA1I ENSGALG00000035051 27 0.966 - - - - - - - - - 0.966 calcium voltage-gated channel subunit alpha1 I, transcript variant X3
13. AK8 ENSGALG00000040923 10 0.964 - - - - - - - - - 0.964 adenylate kinase 8, transcript variant X1
14. EPHA2 ENSGALG00000039895 12 0.96 - - - - - - - - - 0.960 EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]
15. PSTPIP2 ENSGALG00000040136 37 0.957 - - - - - - - - - 0.957 proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
16. KBTBD8 ENSGALG00000007569 20 0.951 - - - - - - - - - 0.951 kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]
17. NFATC2 ENSGALG00000007963 15 0.948 - - - - - - - - - 0.948 nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
18. ENSGALG00000019291 ENSGALG00000019291 4 0.947 - - - - - - - - - 0.947
19. ENSGALG00000006582 ENSGALG00000006582 8 0.944 - - - - - - - - - 0.944
20. ZNF362 ENSGALG00000026558 11 0.928 - - - - - - - - - 0.928 zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
21. DENND3 ENSGALG00000031380 11 0.927 - - - - - - - - - 0.927 DENN domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29134]
22. PPM1L ENSGALG00000009537 5 0.921 - - - - - - - - - 0.921 protein phosphatase, Mg2+/Mn2+ dependent 1L [Source:HGNC Symbol;Acc:HGNC:16381]
23. TAF4B ENSGALG00000015122 28 0.921 - - - - - - - - - 0.921 TATA-box binding protein associated factor 4b [Source:HGNC Symbol;Acc:HGNC:11538]
24. SEC31B ENSGALG00000005722 13 0.92 - - - - - - - - - 0.920 SEC31 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:23197]
25. CDH13 ENSGALG00000005483 93 0.912 - - - - - - - - - 0.912 cadherin 13 [Source:NCBI gene;Acc:414849]
26. PDE7B ENSGALG00000013941 49 0.909 - - - - - - - - - 0.909 phosphodiesterase 7B [Source:HGNC Symbol;Acc:HGNC:8792]
27. BST1 ENSGALG00000014509 12 0.906 - - - - - - - - - 0.906 bone marrow stromal cell antigen 1 [Source:NCBI gene;Acc:422828]
28. EEFSEC ENSGALG00000038684 298 0.896 - - - - - - - - - 0.896 eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
29. TMPRSS9 ENSGALG00000000458 21 0.895 - - - - - - - - - 0.895 transmembrane serine protease 9 [Source:HGNC Symbol;Acc:HGNC:30079]
30. MAPK14 ENSGALG00000042833 13 0.894 - - - - - - - - - 0.894 mitogen-activated protein kinase 14 [Source:HGNC Symbol;Acc:HGNC:6876]
31. UBA2 ENSGALG00000005006 243 0.893 - - - - - - - - - 0.893 ubiquitin like modifier activating enzyme 2 [Source:NCBI gene;Acc:415784]
32. CSMD1 ENSGALG00000035230 12 0.891 - - - - - - - - - 0.891 CUB and Sushi multiple domains 1 [Source:HGNC Symbol;Acc:HGNC:14026]
33. HOMER1 ENSGALG00000014813 19 0.89 - - - - - - - - - 0.890 homer scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:17512]
34. LRFN2 ENSGALG00000010050 28 0.889 - - - - - - - - - 0.889 leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21226]
35. BLNK ENSGALG00000006973 85 0.888 - - - - - - - - - 0.888 B cell linker [Source:NCBI gene;Acc:395733]
36. SPIDR SPIDR 19 0.885 - - - - - - - - - 0.885
37. ATF6 ENSGALG00000032278 71 0.881 - - - - - - - - - 0.881 activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
38. CDC42EP3 ENSGALG00000010551 15 0.88 - - - - - - - - - 0.880 CDC42 effector protein 3 [Source:HGNC Symbol;Acc:HGNC:16943]
39. ENSGALG00000020972 ENSGALG00000020972 54 0.88 - - - - - - - - - 0.880
40. XYLB ENSGALG00000006173 23 0.877 - - - - - - - - - 0.877 xylulokinase [Source:HGNC Symbol;Acc:HGNC:12839]
41. ADAM17 ENSGALG00000016427 49 0.873 - - - - - - - - - 0.873 ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
42. NOX5 ENSGALG00000008063 19 0.868 - - - - - - - - - 0.868 NADPH oxidase 5 [Source:NCBI gene;Acc:415565]
43. SEMA4G ENSGALG00000026957 11 0.868 - - - - - - - - - 0.868 semaphorin 4G [Source:HGNC Symbol;Acc:HGNC:10735]
44. CHRNB4 ENSGALG00000003005 59 0.867 - - - - - - - - - 0.867 cholinergic receptor nicotinic beta 4 subunit [Source:NCBI gene;Acc:395613]
45. TNFIP6 TNFIP6 3024 0.863 - - - - - - - - - 0.863
46. gga-mir-1766 ENSGALG00000028725 54 0.862 - - - - - - - - - 0.862 gga-mir-1766 [Source:miRBase;Acc:MI0007508]
47. GTPBP8 ENSGALG00000015190 21 0.861 - - - - - - - - - 0.861 GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
48. HMGI-C HMGI-C 34 0.861 - - - - - - - - - 0.861
49. STAM2 ENSGALG00000012513 9 0.857 - - - - - - - - - 0.857 signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
50. ITGAV ENSGALG00000002655 26 0.857 - - - - - - - - - 0.857 integrin subunit alpha V [Source:NCBI gene;Acc:396420]
51. TMEM178B ENSGALG00000028444 31 0.855 - - - - - - - - - 0.855 transmembrane protein 178B [Source:NCBI gene;Acc:418120]
52. LMCD1 ENSGALG00000008349 928 0.851 - - - - - - - - - 0.851 LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
53. MICALL2 ENSGALG00000004070 23 0.848 - - - - - - - - - 0.848 MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
54. SP5 ENSGALG00000034094 130 0.847 - - - - - - - - - 0.847 Sp5 transcription factor [Source:NCBI gene;Acc:693261]
55. CCND2 ENSGALG00000017283 38 0.846 - - - - - - - - - 0.846 cyclin D2 [Source:NCBI gene;Acc:374047]
56. ATP11A ENSGALG00000041644 74 0.846 - - - - - - - - - 0.846 ATPase phospholipid transporting 11A [Source:HGNC Symbol;Acc:HGNC:13552]
57. WISP1 ENSGALG00000030115 359 0.843 - - - - - - - - - 0.843 WNT1 inducible signaling pathway protein 1 [Source:NCBI gene;Acc:420322]
58. CENPM ENSGALG00000011914 18 0.843 - - - - - - - - - 0.843 centromere protein M [Source:NCBI gene;Acc:417982]
59. ERMN ENSGALG00000020575 46 0.839 - - - - - - - - - 0.839 ermin [Source:HGNC Symbol;Acc:HGNC:29208]
60. CCDC92 ENSGALG00000003146 40 0.836 - - - - - - - - - 0.836 coiled-coil domain containing 92 [Source:HGNC Symbol;Acc:HGNC:29563]
61. FGF19 ENSGALG00000028376 104 0.836 - - - - - - - - - 0.836 fibroblast growth factor 19 [Source:NCBI gene;Acc:395394]
62. SLC15A5 ENSGALG00000013097 213 0.835 - - - - - - - - - 0.835 solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
63. PLXNB1 23 0.832 - - - - - - - - - 0.832 plexin B1, transcript variant X2
64. NCF4 ENSGALG00000038141 216 0.822 - - - - - - - - - 0.822 neutrophil cytosolic factor 4 [Source:NCBI gene;Acc:418052]
65. WWP2 ENSGALG00000000699 5040 0.82 - - - - - - - - - 0.820 WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
66. SLC41A2 ENSGALG00000012697 13 0.816 - - - - - - - - - 0.816 solute carrier family 41 member 2 [Source:NCBI gene;Acc:427913]
67. PROK2 ENSGALG00000007785 55 0.811 - - - - - - - - - 0.811 prokineticin 2 [Source:HGNC Symbol;Acc:HGNC:18455]
68. MAT2A ENSGALG00000015366 17 0.809 - - - - - - - - - 0.809 methionine adenosyltransferase 2A, transcript variant X1
69. ERN2 ENSGALG00000027592 186 0.805 - - - - - - - - - 0.805 endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]
70. KITLG ENSGALG00000011206 71 0.803 - - - - - - - - - 0.803 KIT ligand [Source:NCBI gene;Acc:396028]
71. LOC425001 ENSGALG00000009468 7 0.802 - - 0.802 - - - - - - - uncharacterized LOC425001, transcript variant X2
72. ENSGALG00000022206 ENSGALG00000022206 2 0.802 - - 0.802 - - - - - - -
73. ENSGALG00000011273 ENSGALG00000011273 9 0.802 - - 0.802 - - - - - - -
74. PLA2G4EL6 ENSGALG00000020458 4 0.802 - - 0.802 - - - - - - - phospholipase A2 group IVE-like 6
75. CPSF4L ENSGALG00000004441 4 0.802 - - 0.802 - - - - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
76. ENSGALG00000025997 ENSGALG00000025997 1 0.802 - - 0.802 - - - - - - -
77. LOC771085 ENSGALG00000016802 1 0.802 - - 0.802 - - - - - - - pinopsin-like, transcript variant X1
78. SERPINC1 ENSGALG00000004591 68 0.798 - - - - - - - - - 0.798 Gallus gallus serpin family C member 1 (SERPINC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001353945]
79. TMEM117 ENSGALG00000009596 48 0.797 - - - - - - - - - 0.797 transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
80. PALMD ENSGALG00000005442 901 0.796 - - - - - - - - - 0.796 palmdelphin [Source:NCBI gene;Acc:424475]
81. AMDHD1 ENSGALG00000011414 245 0.79 - - - - - - - - - 0.790 amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
82. PLEKHG4 ENSGALG00000023898 65 0.789 - - - - - - - - - 0.789 pleckstrin homology and RhoGEF domain containing G4 [Source:HGNC Symbol;Acc:HGNC:24501]
83. PHC3 ENSGALG00000009372 157 0.787 - - - - - - - - - 0.787 polyhomeotic homolog 3, transcript variant X8
84. RGS7 ENSGALG00000039772 69 0.783 - - - - - - - - - 0.783 regulator of G-protein signaling 7 [Source:NCBI gene;Acc:395620]
85. PDXK ENSGALG00000016205 26 0.782 - - - - - - - - - 0.782 pyridoxal kinase [Source:NCBI gene;Acc:418549]
86. PSMG2 ENSGALG00000013863 351 0.781 - - - - - - - - - 0.781 proteasome assembly chaperone 2 [Source:HGNC Symbol;Acc:HGNC:24929]
87. ARNTL ENSGALG00000005378 19 0.773 - - - - - - - - - 0.773 aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
88. CHRD ENSGALG00000026983 712 0.772 - - - - - - - - - 0.772 chordin [Source:NCBI gene;Acc:395828]
89. CMYA5 16 0.77 - - - - 0.770 - - - - - cardiomyopathy associated 5
90. PLTP ENSGALG00000036686 79 0.769 - - - - - - - - - 0.769 phospholipid transfer protein [Source:NCBI gene;Acc:428164]
91. MAPKAPK3 ENSGALG00000002283 30 0.769 - - - - - - - - - 0.769 Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
92. BCL2L15 124 0.764 - - - - - - - - - 0.764 BCL2 like 15
93. APBB1IP ENSGALG00000007579 30 0.758 - - - - - - - - - 0.758 amyloid beta precursor protein binding family B member 1 interacting protein [Source:NCBI gene;Acc:420492]
94. INOS INOS 313 0.758 - - - - - - - - - 0.758
95. LETM2 ENSGALG00000036049 19 0.756 - - - - - - - - - 0.756 leucine zipper and EF-hand containing transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:14648]
96. VCAM1 ENSGALG00000005257 102 0.755 - - - - 0.755 - - - - - vascular cell adhesion molecule 1, transcript variant X1
97. CCDC181 ENSGALG00000015221 10 0.755 - - - - 0.755 - - - - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
98. MBD5 ENSGALG00000012449 27 0.755 - - - - 0.755 - - - - - methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:HGNC:20444]
99. HEMGN ENSGALG00000045740 8 0.755 - - - - 0.755 - - - - - hemogen, transcript variant X1
100. CAPN3 ENSGALG00000009050 3 0.755 - - - - 0.755 - - - - - calpain 3 [Source:NCBI gene;Acc:423233]

There are 43 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA