Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DDX6

Gene Name Gene ID Reads Annotation
DDX6 ENSGALG00000033064 2193 DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]











Genes with expression patterns similar to DDX6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DDX6 ENSGALG00000033064 2193 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
2. GGT7 ENSGALG00000001062 476 1.718 - - 0.941 - - - 0.777 - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
3. EMP1 ENSGALG00000011803 351 1.711 - - 0.874 - 0.837 - - - - - epithelial membrane protein 1 [Source:NCBI gene;Acc:417964]
4. ACOX1 ENSGALG00000002159 2953 1.669 - - 0.898 - - - 0.771 - - - acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
5. IWS1 ENSGALG00000001803 2305 1.599 - - 0.805 - 0.794 - - - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
6. CYTH1 ENSGALG00000007093 2453 1.593 - - 0.840 - - - 0.753 - - - cytohesin 1 [Source:NCBI gene;Acc:422085]
7. TRMT10B ENSGALG00000029118 3093 1.57 - - 0.862 - 0.708 - - - - - tRNA methyltransferase 10B [Source:HGNC Symbol;Acc:HGNC:26454]
8. MANF ENSGALG00000002362 7518 1.55 - - 0.795 - - - 0.755 - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
9. STC2 ENSGALG00000002893 2119 1.525 - - - - 0.789 - 0.736 - - - stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]
10. IQCH ENSGALG00000007909 128 1.473 - - - - 0.742 - 0.731 - - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
11. CLEC16A ENSGALG00000007167 66 0.972 - - 0.972 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
12. SMARCAD1 ENSGALG00000037339 149 0.968 - - 0.968 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
13. TRIM13 ENSGALG00000017011 92 0.967 - - 0.967 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
14. TUBGCP3 ENSGALG00000016836 332 0.967 - - 0.967 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
15. ITGB4 ENSGALG00000002389 44 0.966 - - 0.966 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
16. APTX ENSGALG00000001954 692 0.966 - - 0.966 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
17. TDRD6 48 0.966 - - 0.966 - - - - - - - tudor domain containing 6
18. BBS5 ENSGALG00000009846 344 0.966 - - 0.966 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
19. OSGIN2 ENSGALG00000042840 83 0.966 - - 0.966 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
20. MRC2 ENSGALG00000000461 48 0.966 - - 0.966 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
21. FAM134C 860 0.965 - - 0.965 - - - - - - - family with sequence similarity 134 member C
22. ENSGALG00000002020 ENSGALG00000002020 183 0.965 - - 0.965 - - - - - - -
23. F2R ENSGALG00000014983 106 0.965 - - 0.965 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
24. ENSGALG00000028964 ENSGALG00000028964 46 0.965 - - 0.965 - - - - - - -
25. U4 U4 69 0.965 - - 0.965 - - - - - - -
26. SLC3A1 ENSGALG00000009973 608 0.964 - - 0.964 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
27. GTF2H2 ENSGALG00000002399 2361 0.964 - - 0.964 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
28. RQCD1 RQCD1 110 0.964 - - 0.964 - - - - - - -
29. UEVLD ENSGALG00000006342 164 0.964 - - 0.964 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
30. PTDSS2 ENSGALG00000004300 682 0.964 - - 0.964 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
31. ENSGALG00000020103 ENSGALG00000020103 64 0.964 - - 0.964 - - - - - - -
32. CDC14B ENSGALG00000012627 110 0.964 - - 0.964 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
33. FBXL5 ENSGALG00000014510 245 0.964 - - 0.964 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
34. RRN3 ENSGALG00000041989 3934 0.963 - - 0.963 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
35. ENSGALG00000004703 ENSGALG00000004703 112 0.963 - - 0.963 - - - - - - -
36. SZT2 ENSGALG00000028561 255 0.963 - - 0.963 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
37. NXPE3 ENSGALG00000015344 111 0.963 - - 0.963 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
38. MED12 ENSGALG00000036322 814 0.962 - - 0.962 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
39. L3MBTL3 ENSGALG00000034030 113 0.962 - - 0.962 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
40. DBN1 ENSGALG00000033405 216 0.962 - - 0.962 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
41. LRRC71 ENSGALG00000027351 695 0.962 - - 0.962 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
42. RPS6KB1 ENSGALG00000005198 169 0.961 - - 0.961 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
43. AKAP10 ENSGALG00000004679 103 0.961 - - 0.961 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
44. NACAD 679 0.961 - - 0.961 - - - - - - - NAC alpha domain containing, transcript variant X1
45. LRRC42 ENSGALG00000010743 384 0.961 - - 0.961 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
46. ABCC3 ENSGALG00000007522 340 0.96 - - 0.960 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
47. SNRB SNRB 4477 0.96 - - 0.960 - - - - - - -
48. NGF ENSGALG00000002556 122 0.959 - - 0.959 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
49. RAD54L2 ENSGALG00000003243 187 0.959 - - 0.959 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
50. GDPD4 ENSGALG00000000690 824 0.959 - - 0.959 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
51. ITM2B ENSGALG00000016996 1112 0.958 - - 0.958 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
52. WDR92 ENSGALG00000008760 3934 0.958 - - 0.958 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
53. ABCE1 ENSGALG00000009961 958 0.957 - - 0.957 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
54. ADK ENSGALG00000005057 199 0.957 - - 0.957 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
55. TCTN2 ENSGALG00000023683 3596 0.956 - - 0.956 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
56. ATP8B4 ENSGALG00000002326 456 0.955 - - 0.955 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
57. BBX ENSGALG00000015353 1281 0.955 - - 0.955 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
58. PCDH17 ENSGALG00000016941 1006 0.955 - - 0.955 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
59. AASDHPPT ENSGALG00000027981 1017 0.955 - - 0.955 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
60. KCTD3 ENSGALG00000009678 335 0.954 - - 0.954 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
61. SGCE ENSGALG00000009670 3070 0.954 - - 0.954 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
62. GFER ENSGALG00000005579 1367 0.953 - - 0.953 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
63. SOBP ENSGALG00000043047 147 0.953 - - 0.953 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
64. CHAMP1 ENSGALG00000016813 508 0.953 - - 0.953 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
65. CEP104 ENSGALG00000000978 1130 0.953 - - 0.953 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
66. IFT81 ENSGALG00000003854 2534 0.951 - - 0.951 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
67. SMOC2 ENSGALG00000011205 340 0.951 - - 0.951 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
68. PRUNE PRUNE 452 0.951 - - 0.951 - - - - - - -
69. CA9 ENSGALG00000021340 1431 0.951 - - 0.951 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
70. MLLT3 ENSGALG00000015078 502 0.95 - - 0.950 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
71. CENPO ENSGALG00000016609 1699 0.95 - - 0.950 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
72. SLK ENSGALG00000008318 2220 0.949 - - 0.949 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
73. CHGA ENSGALG00000010820 1028 0.949 - - 0.949 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
74. WHSC1 1712 0.949 - - 0.949 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
75. TTPAL ENSGALG00000004244 2734 0.949 - - 0.949 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
76. ATP10D ENSGALG00000014192 94 0.948 - - 0.948 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
77. ATF7IP ENSGALG00000011814 1571 0.946 - - 0.946 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
78. SLC37A3 ENSGALG00000012849 836 0.944 - - 0.944 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
79. RFK ENSGALG00000033558 1364 0.944 - - 0.944 - - - - - - - riboflavin kinase, transcript variant X3
80. BAG5 ENSGALG00000031062 4498 0.943 - - 0.943 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
81. ENSGALG00000008689 ENSGALG00000008689 232 0.943 - - 0.943 - - - - - - -
82. MTHFSD ENSGALG00000033322 824 0.942 - - 0.942 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
83. MIB1 ENSGALG00000014974 3583 0.941 - - 0.941 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
84. IQCD ENSGALG00000037307 642 0.941 - - 0.941 - - - - - - - IQ motif containing D, transcript variant X2
85. PCYT1B 190 0.941 - - 0.941 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
86. SEPHS1 ENSGALG00000014575 10701 0.941 - - 0.941 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
87. MED15 ENSGALG00000006430 814 0.941 - - 0.941 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
88. IFT57 ENSGALG00000015356 5540 0.94 - - 0.940 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
89. HOXA7 ENSGALG00000026989 6746 0.94 - - 0.940 - - - - - - - homeobox A7 [Source:NCBI gene;Acc:395290]
90. ARRDC4 ENSGALG00000007012 1039 0.94 - - 0.940 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
91. NDUFB1 ENSGALG00000028537 2059 0.939 - - 0.939 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
92. CDC5L ENSGALG00000016704 22893 0.939 - - 0.939 - - - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
93. ATP6V0A2 ENSGALG00000003194 4824 0.939 - - 0.939 - - - - - - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
94. WAPAL WAPAL 625 0.939 - - 0.939 - - - - - - -
95. ERCC3 ENSGALG00000011515 3133 0.939 - - 0.939 - - - - - - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
96. RALGDS ENSGALG00000003412 4478 0.938 - - 0.938 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
97. TMEM242 ENSGALG00000013689 377 0.937 - - 0.937 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
98. SNN ENSGALG00000028876 1687 0.937 - - 0.937 - - - - - - - stannin [Source:NCBI gene;Acc:416429]
99. AMFR ENSGALG00000003107 6560 0.936 - - 0.936 - - - - - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
100. AKT3 ENSGALG00000034081 866 0.935 - - 0.935 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]

There are 570 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA