Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DDX54

Gene Name Gene ID Reads Annotation
DDX54 ENSGALG00000007490 8729 DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]











Genes with expression patterns similar to DDX54

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DDX54 ENSGALG00000007490 8729 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
2. DCAF4 ENSGALG00000009345 2604 1.969 - - - - - - 0.972 0.997 - - DDB1 and CUL4 associated factor 4
3. DHCR7 ENSGALG00000004106 4731 1.789 - - - - - - 0.935 0.854 - - 7-dehydrocholesterol reductase [Source:NCBI gene;Acc:422982]
4. TCF25 ENSGALG00000000129 7587 1.788 - - - - - - 0.965 - - 0.823 transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
5. AIMP1 ENSGALG00000010553 17994 1.772 - - - - - - 0.926 - - 0.846 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
6. ERP44 ENSGALG00000013452 5352 1.741 - - - - - - - 0.996 - 0.745 endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:HGNC:18311]
7. SLC35B1 ENSGALG00000035057 10683 1.686 - - - - - - 0.959 - - 0.727 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
8. VWA9 ENSGALG00000007491 4790 1.676 - - - - - - 0.830 - - 0.846 von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
9. SNX12 ENSGALG00000005659 9503 1.66 - - - - - - 0.917 - - 0.743 sorting nexin 12 [Source:NCBI gene;Acc:428704]
10. ATP6V1D ENSGALG00000009570 9827 1.66 - - - - - - 0.949 0.711 - - ATPase H+ transporting V1 subunit D [Source:NCBI gene;Acc:423280]
11. GPN2 ENSGALG00000027909 5204 1.633 - - - - - - - 0.855 - 0.778 GPN-loop GTPase 2 [Source:HGNC Symbol;Acc:HGNC:25513]
12. ZRANB2 ENSGALG00000011340 18994 1.607 - - - - - - 0.742 0.865 - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
13. EXOC7 ENSGALG00000002050 9612 1.467 - - - - - - 0.706 0.761 - - exocyst complex component 7 [Source:NCBI gene;Acc:417361]
14. RPF2 ENSGALG00000037087 12788 1.449 - - - - - - - 0.715 - 0.734 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
15. KIF21A ENSGALG00000007098 5919 0.999 - - - - - - - 0.999 - - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
16. RFWD2 1215 0.999 - - - - - - - 0.999 - - ring finger and WD repeat domain 2, transcript variant X6
17. COMMD8 ENSGALG00000026279 13509 0.999 - - - - - - - 0.999 - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
18. MAN2C1 ENSGALG00000001615 2362 0.998 - - - - - - - 0.998 - - mannosidase alpha class 2C member 1 [Source:NCBI gene;Acc:415306]
19. IQCK ENSGALG00000028197 596 0.998 - - - - - - - 0.998 - - IQ motif containing K [Source:HGNC Symbol;Acc:HGNC:28556]
20. DACT1 ENSGALG00000012023 1008 0.998 - - - - - - - 0.998 - - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
21. FOCAD ENSGALG00000015071 3677 0.998 - - - - - - - 0.998 - - focadhesin [Source:NCBI gene;Acc:427233]
22. CREG1 ENSGALG00000040426 1188 0.998 - - - - - - - 0.998 - - cellular repressor of E1A stimulated genes 1 [Source:NCBI gene;Acc:768680]
23. NHLRC1 ENSGALG00000012688 1476 0.998 - - - - - - - 0.998 - - NHL repeat containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21576]
24. PALB2 ENSGALG00000006078 1549 0.998 - - - - - - - 0.998 - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
25. TP73 ENSGALG00000001006 335 0.998 - - - - - - - 0.998 - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
26. KIF18B ENSGALG00000031553 3192 0.997 - - - - - - - 0.997 - - kinesin family member 18B [Source:NCBI gene;Acc:419968]
27. PI4K2B ENSGALG00000031538 2607 0.997 - - - - - - - 0.997 - - phosphatidylinositol 4-kinase type 2 beta [Source:NCBI gene;Acc:422807]
28. MRPL22 ENSGALG00000003919 2760 0.997 - - - - - - - 0.997 - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
29. ADAT1 ENSGALG00000000908 1484 0.997 - - - - - - - 0.997 - - adenosine deaminase, tRNA specific 1 [Source:NCBI gene;Acc:415886]
30. EXOC8 ENSGALG00000043280 3596 0.996 - - - - - - - 0.996 - - exocyst complex component 8 [Source:NCBI gene;Acc:421531]
31. ASAH1 ENSGALG00000026364 2783 0.996 - - - - - - - 0.996 - - N-acylsphingosine amidohydrolase (acid ceramidase) 1 [Source:NCBI gene;Acc:422727]
32. PSMC3IP ENSGALG00000019741 5428 0.996 - - - - - - - 0.996 - - PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
33. HGS ENSGALG00000007224 3487 0.996 - - - - - - - 0.996 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:HGNC:4897]
34. C14orf1 C14orf1 14289 0.99 - - - - - - - 0.990 - -
35. TSTA3 ENSGALG00000031525 3391 0.99 - - - - - - 0.990 - - - tissue specific transplantation antigen P35B [Source:NCBI gene;Acc:420292]
36. PIGQ ENSGALG00000001985 1584 0.99 - - - - - - - 0.990 - - phosphatidylinositol glycan anchor biosynthesis class Q [Source:HGNC Symbol;Acc:HGNC:14135]
37. AIF1L ENSGALG00000029834 13866 0.989 - - - - - - - 0.989 - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
38. SCYL3 ENSGALG00000036264 2935 0.989 - - - - - - 0.989 - - - SCY1 like pseudokinase 3 [Source:NCBI gene;Acc:424396]
39. HDHD3 ENSGALG00000044101 6333 0.988 - - - - - - 0.988 - - - haloacid dehalogenase like hydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28171]
40. ZDHHC14 ENSGALG00000013695 2648 0.988 - - - - - - - 0.988 - - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
41. PTCHD1 ENSGALG00000016358 3882 0.987 - - - - - - 0.987 - - - patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
42. NUMA1 ENSGALG00000001258 8406 0.987 - - - - - - - 0.987 - - nuclear mitotic apparatus protein 1 [Source:NCBI gene;Acc:768717]
43. NDUFA9 ENSGALG00000017282 14358 0.987 - - - - - - - 0.987 - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
44. ZFX ENSGALG00000016327 5470 0.987 - - - - - - 0.987 - - - zinc finger protein, X-linked, transcript variant X4
45. ENSGALG00000001166 ENSGALG00000001166 2013 0.987 - - - - - - 0.987 - - -
46. BBX ENSGALG00000015353 1281 0.987 - - - - - - 0.987 - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
47. SLC29A1 ENSGALG00000010182 1522 0.987 - - - - - - 0.987 - - - solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]
48. ANXA6 ENSGALG00000004357 2891 0.987 - - - - - - 0.987 - - - annexin A6 [Source:NCBI gene;Acc:395481]
49. COMMD10 ENSGALG00000002308 7442 0.986 - - - - - - - 0.986 - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
50. NFYA ENSGALG00000003247 1894 0.986 - - - - - - 0.986 - - - nuclear transcription factor Y subunit alpha [Source:NCBI gene;Acc:419917]
51. COMT ENSGALG00000002024 2483 0.986 - - - - - - - 0.986 - - catechol-O-methyltransferase [Source:HGNC Symbol;Acc:HGNC:2228]
52. MTRF1L ENSGALG00000013609 1581 0.986 - - - - - - 0.986 - - - mitochondrial translational release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
53. GPATCH2 ENSGALG00000009627 4061 0.986 - - - - - - 0.986 - - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
54. PXMP4 ENSGALG00000003042 1035 0.986 - - - - - - 0.986 - - - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
55. FBXO45 ENSGALG00000037281 3936 0.986 - - - - - - 0.986 - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
56. F2RL1 ENSGALG00000014984 565 0.986 - - - - - - 0.986 - - - F2R like trypsin receptor 1 [Source:NCBI gene;Acc:427213]
57. KRR1 ENSGALG00000010227 11783 0.985 - - - - - - - 0.985 - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
58. UBE2K ENSGALG00000014290 2138 0.985 - - - - - - 0.985 - - - ubiquitin conjugating enzyme E2 K [Source:NCBI gene;Acc:428787]
59. EFCAB10 ENSGALG00000045949 514 0.985 - - - - - - 0.985 - - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
60. EPS8 295 0.985 - - - - - - 0.985 - - - epidermal growth factor receptor pathway substrate 8, transcript variant X4
61. SETD7 ENSGALG00000009800 1230 0.985 - - - - - - 0.985 - - - SET domain containing lysine methyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:30412]
62. BECN1 ENSGALG00000002973 1569 0.984 - - - - - - 0.984 - - - beclin 1 [Source:NCBI gene;Acc:420018]
63. AASDHPPT ENSGALG00000027981 1017 0.984 - - - - - - 0.984 - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
64. C18H17ORF106 C18H17ORF106 2355 0.984 - - - - - - 0.984 - - -
65. GTF3A ENSGALG00000017098 9264 0.984 - - - - - - - 0.984 - - general transcription factor IIIA [Source:NCBI gene;Acc:418931]
66. SS18 ENSGALG00000015119 4687 0.983 - - - - - - - 0.983 - - SS18, nBAF chromatin remodeling complex subunit [Source:NCBI gene;Acc:421085]
67. GKAP1 ENSGALG00000012586 2908 0.983 - - - - - - 0.983 - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
68. KDELR3 ENSGALG00000032313 4376 0.983 - - - - - - 0.983 - - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
69. RERE ENSGALG00000002232 8724 0.983 - - - - - - - 0.983 - - arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]
70. AKAP17A ENSGALG00000016686 2469 0.983 - - - - - - 0.983 - - - A-kinase anchoring protein 17A [Source:NCBI gene;Acc:418664]
71. DRG1 ENSGALG00000006921 10791 0.983 - - - - - - - 0.983 - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
72. TBC1D19 ENSGALG00000029673 1868 0.983 - - - - - - 0.983 - - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
73. ENSGALG00000026460 ENSGALG00000026460 607 0.983 - - - - - - 0.983 - - -
74. MLC1 ENSGALG00000040038 206 0.982 - - - - - - 0.982 - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
75. MORC2 2505 0.982 - - - - - - 0.982 - - - MORC family CW-type zinc finger 2, transcript variant X2
76. WDR77 ENSGALG00000040864 3766 0.982 - - - - - - 0.982 - - - WD repeat domain 77 [Source:NCBI gene;Acc:419865]
77. ORC5 ENSGALG00000008175 3426 0.982 - - - - - - 0.982 - - - origin recognition complex subunit 5 [Source:NCBI gene;Acc:417714]
78. TAOK3 ENSGALG00000007396 3094 0.982 - - - - - - 0.982 - - - TAO kinase 3 [Source:NCBI gene;Acc:395499]
79. GEMIN5 ENSGALG00000003937 1685 0.981 - - - - - - 0.981 - - - gem nuclear organelle associated protein 5 [Source:HGNC Symbol;Acc:HGNC:20043]
80. VTA1 ENSGALG00000013810 4998 0.981 - - - - - - 0.981 - - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
81. XPC ENSGALG00000006357 2484 0.98 - - - - - - 0.980 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
82. RBFA ENSGALG00000036067 6542 0.98 - - - - - - 0.980 - - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
83. GPATCH1 ENSGALG00000004839 6455 0.98 - - - - - - 0.980 - - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
84. ENSGALG00000006671 ENSGALG00000006671 4194 0.98 - - - - - - 0.980 - - -
85. PISD ENSGALG00000006872 3539 0.98 - - - - - - 0.980 - - - phosphatidylserine decarboxylase [Source:HGNC Symbol;Acc:HGNC:8999]
86. FNTA ENSGALG00000015397 3741 0.98 - - - - - - 0.980 - - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
87. FAIM ENSGALG00000012082 1209 0.979 - - - - - - 0.979 - - - Fas apoptotic inhibitory molecule [Source:HGNC Symbol;Acc:HGNC:18703]
88. ISY1 ENSGALG00000005012 7477 0.979 - - - - - - - 0.979 - - ISY1 splicing factor homolog
89. INPP5E ENSGALG00000001964 3580 0.979 - - - - - - 0.979 - - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
90. PHKG1 ENSGALG00000002485 15214 0.978 - - - - - - 0.978 - - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
91. CCDC43 ENSGALG00000001022 5462 0.977 - - - - - - 0.977 - - - coiled-coil domain containing 43 [Source:NCBI gene;Acc:419971]
92. SKA3 ENSGALG00000017128 4176 0.977 - - - - - - 0.977 - - - spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]
93. SFXN4 ENSGALG00000009350 3899 0.977 - - - - - - 0.977 - - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
94. XRCC2 ENSGALG00000026865 2214 0.976 - - - - - - 0.976 - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
95. CMC1 ENSGALG00000025811 3939 0.975 - - - - - - 0.975 - - - C-X9-C motif containing 1
96. BYSL ENSGALG00000003467 7555 0.975 - - - - - - 0.975 - - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
97. ZCCHC10 ENSGALG00000036666 5148 0.974 - - - - - - 0.974 - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
98. TNFRSF21 ENSGALG00000016719 2762 0.974 - - - - - - 0.974 - - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
99. WBP4 ENSGALG00000016949 5858 0.974 - - - - - - 0.974 - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
100. GINS1 ENSGALG00000008538 4786 0.974 - - - - - - 0.974 - - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]

There are 264 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA