Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DDX42

Gene Name Gene ID Reads Annotation
DDX42 ENSGALG00000000581 8780 DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]











Genes with expression patterns similar to DDX42

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DDX42 ENSGALG00000000581 8780 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
2. LPCAT3 ENSGALG00000014570 7919 2.483 - - 0.901 - - - 0.778 0.804 - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
3. ELOVL5 ENSGALG00000016314 18163 2.251 - - 0.822 - - - 0.707 0.722 - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
4. WHSC1 1712 1.799 - - 0.888 - - - 0.911 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
5. PTDSS2 ENSGALG00000004300 682 1.789 - - 0.869 - - - 0.920 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
6. HYAL1 ENSGALG00000000785 1778 1.769 - - 0.855 - - - 0.914 - - - hyaluronoglucosaminidase 1, transcript variant X3
7. C1GALT1 ENSGALG00000009752 7148 1.757 - - - - - - 0.951 0.806 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
8. CALSYNTENIN-1 CALSYNTENIN-1 11195 1.751 - - 0.817 - - - 0.934 - - -
9. COG7 ENSGALG00000006156 4072 1.737 - - 0.863 - - - 0.874 - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
10. BEND5 ENSGALG00000010505 3298 1.73 - - 0.790 - - - 0.940 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
11. TAF1B ENSGALG00000016437 2318 1.726 - - 0.787 - - - 0.939 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
12. IWS1 ENSGALG00000001803 2305 1.72 - - 0.792 - - - 0.928 - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
13. UFL1 ENSGALG00000015580 3845 1.711 - - 0.837 - - - 0.874 - - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
14. C9orf85 ENSGALG00000026001 4110 1.71 - - 0.746 - - - 0.964 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
15. CASP6 ENSGALG00000012186 6639 1.708 - - - - - - 0.906 0.802 - - caspase 6 [Source:NCBI gene;Acc:395477]
16. IFT81 ENSGALG00000003854 2534 1.707 - - 0.846 - - - 0.861 - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
17. ABHD13 ENSGALG00000016853 4975 1.701 - - 0.752 - - - 0.949 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
18. PANK1 ENSGALG00000006431 2910 1.699 - - 0.785 - - - 0.914 - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
19. ZCCHC8 ENSGALG00000004486 3201 1.689 - - 0.809 - - - 0.880 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
20. MYEOV2 MYEOV2 5155 1.682 - - - - - - 0.926 0.756 - -
21. TIRAP ENSGALG00000040224 2578 1.678 - - - - - - 0.936 0.742 - - TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
22. NNT ENSGALG00000014869 8496 1.67 - - - - - - 0.934 0.736 - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
23. GNMT ENSGALG00000043290 3288 1.663 - - - - - - 0.931 0.732 - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
24. FOXK2 ENSGALG00000001577 6346 1.658 - - 0.741 - - - 0.917 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
25. POMP ENSGALG00000017090 5504 1.651 - - 0.874 - - - - 0.777 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
26. ZNF830 ENSGALG00000013156 3896 1.65 - - - - - - 0.947 0.703 - - zinc finger protein 830
27. TAF5 ENSGALG00000008241 5227 1.646 - - 0.840 - - - 0.806 - - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
28. C17orf75 ENSGALG00000003434 4262 1.642 - - 0.872 - - - 0.770 - - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
29. PLEKHA5 ENSGALG00000013134 3656 1.642 - - - - - - 0.901 0.741 - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
30. BTBD7 4136 1.642 - - - - - - 0.941 0.701 - - BTB domain containing 7, transcript variant X2
31. PWP1 ENSGALG00000012631 10536 1.63 - - - - - - 0.925 0.705 - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
32. BZW2 ENSGALG00000010809 29213 1.629 - - 0.886 - - - - 0.743 - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
33. GARNL3 ENSGALG00000000847 3423 1.622 - - - - - - 0.911 0.711 - - GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
34. ASH2L ENSGALG00000003233 4814 1.62 - - 0.819 - - - - 0.801 - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
35. SQSTM1 ENSGALG00000035804 2238 1.613 - - - - - - 0.894 0.719 - - sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]
36. ZDHHC13 ENSGALG00000004085 1802 1.609 - - - - - - 0.902 0.707 - - zinc finger DHHC-type containing 13 [Source:NCBI gene;Acc:422980]
37. PQLC1 ENSGALG00000043150 3133 1.607 - - - - - - 0.863 0.744 - - PQ loop repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:26188]
38. LXR LXR 2599 1.604 - - 0.879 - - - - 0.725 - -
39. USP47 ENSGALG00000005569 4813 1.593 - - - - - - 0.876 0.717 - - ubiquitin specific peptidase 47 [Source:NCBI gene;Acc:423032]
40. AASDHPPT ENSGALG00000027981 1017 1.588 - - 0.876 - - - - 0.712 - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
41. PCF11 ENSGALG00000017249 4714 1.584 - - - - - - 0.832 0.752 - - PCF11 cleavage and polyadenylation factor subunit, transcript variant X4
42. POLR3F ENSGALG00000008749 5645 1.583 - - - - - - 0.882 0.701 - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
43. GHITM ENSGALG00000021262 7159 1.582 - - - - - - 0.879 0.703 - - growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
44. AKTIP ENSGALG00000033378 1991 1.582 - - 0.859 - - - - 0.723 - - AKT interacting protein [Source:NCBI gene;Acc:415720]
45. WWC1 ENSGALG00000001826 4666 1.58 - - - - - - 0.857 0.723 - - WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
46. INTS6L ENSGALG00000006157 2303 1.573 - - - - - - 0.820 0.753 - - integrator complex subunit 6 like, transcript variant X6
47. PEMT ENSGALG00000004875 4094 1.567 - - 0.845 - - - - 0.722 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
48. MIB1 ENSGALG00000014974 3583 1.566 - - 0.866 - - - - 0.700 - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
49. SPCS1 ENSGALG00000001655 7718 1.56 - - 0.742 - - - - 0.818 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
50. WDR48 ENSGALG00000006052 3575 1.554 - - - - 0.771 - - 0.783 - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
51. TBPL1 ENSGALG00000013981 3710 1.554 - - - - - - 0.843 0.711 - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
52. HMGN1 ENSGALG00000016067 17375 1.552 - - 0.782 - - - 0.770 - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
53. SFXN4 ENSGALG00000009350 3899 1.55 - - 0.842 - - - - 0.708 - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
54. MRPS22 ENSGALG00000005367 8307 1.547 - - - - - - 0.831 0.716 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
55. PSMD13 ENSGALG00000043684 14720 1.544 - - 0.744 - - - - 0.800 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
56. URM1 ENSGALG00000004971 17880 1.543 - - 0.811 - - - - 0.732 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
57. GSKIP ENSGALG00000011088 3421 1.543 - - - - - - 0.840 0.703 - - GSK3B interacting protein [Source:NCBI gene;Acc:423442]
58. CEPT1 ENSGALG00000000142 4219 1.542 - - 0.741 - - - 0.801 - - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
59. FBN1 ENSGALG00000004960 2130 1.533 - - 0.798 - - - - 0.735 - - fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603]
60. AP2M1 ENSGALG00000008432 16249 1.532 - - 0.829 - - - - 0.703 - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
61. SLC12A4 ENSGALG00000034179 5674 1.532 - - 0.818 - - - - 0.714 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
62. REEP5 ENSGALG00000023157 6282 1.526 - - - - - - 0.767 0.759 - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
63. AAMP ENSGALG00000011445 2528 1.524 - - 0.765 - - - - 0.759 - - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
64. CCNC ENSGALG00000015471 6497 1.524 - - - - 0.740 - - 0.784 - - cyclin C [Source:NCBI gene;Acc:421791]
65. ANAPC16 ENSGALG00000004410 18001 1.524 - - - - - - 0.749 0.775 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
66. CROT ENSGALG00000008813 8052 1.524 - - - - - - 0.810 0.714 - - carnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:HGNC:2366]
67. HINT3 ENSGALG00000044342 5674 1.523 - - 0.808 - - - - 0.715 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
68. WSB2 ENSGALG00000008151 13246 1.508 - - 0.776 - - - - 0.732 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
69. TIMMDC1 ENSGALG00000024480 9337 1.501 - - 0.771 - - - - 0.730 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
70. TBC1D23 ENSGALG00000015273 4856 1.496 - - - - 0.733 - - 0.763 - - TBC1 domain family member 23 [Source:NCBI gene;Acc:418383]
71. MAEA ENSGALG00000013310 13230 1.487 - - 0.735 - - - - 0.752 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
72. PTRH2 ENSGALG00000005150 4756 1.478 - - 0.765 - - - - 0.713 - - peptidyl-tRNA hydrolase 2 [Source:NCBI gene;Acc:417634]
73. ADI1 ENSGALG00000025796 8636 1.477 - - - - 0.721 - - 0.756 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
74. THOC1 ENSGALG00000014915 5846 1.475 - - 0.773 - - - - 0.702 - - Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001321610]
75. COQ3 ENSGALG00000015486 3508 1.475 - - 0.751 - - - - 0.724 - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
76. ARFIP1 ENSGALG00000041361 7351 1.466 - - 0.704 - - - 0.762 - - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
77. VAPB ENSGALG00000007549 15511 1.449 - - 0.710 - - - 0.739 - - - VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
78. TXLNA 6802 1.446 - - - - - - 0.723 0.723 - - taxilin alpha, transcript variant X2
79. MTAP ENSGALG00000008174 10976 1.445 - - - - - - 0.701 0.744 - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
80. MPP1 ENSGALG00000005071 3865 1.44 - - - - - - 0.716 0.724 - - membrane palmitoylated protein 1 [Source:NCBI gene;Acc:422197]
81. C1H11ORF73 C1H11ORF73 10071 1.434 - - - - - - 0.702 0.732 - -
82. PRKACB ENSGALG00000028530 12506 1.425 - - 0.703 - - - - 0.722 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
83. C12orf66 ENSGALG00000027682 2110 0.959 - - - - - - 0.959 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
84. ACTR10 ENSGALG00000012041 2752 0.957 - - - - - - 0.957 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
85. CLN6 ENSGALG00000007981 5656 0.955 - - - - - - 0.955 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
86. TMEM14A ENSGALG00000019894 5279 0.954 - - - - - - 0.954 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
87. ZER1 ENSGALG00000004659 1635 0.953 - - - - - - 0.953 - - - zyg-11 related cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:30960]
88. NAPEPLD ENSGALG00000008285 1295 0.95 - - - - - - 0.950 - - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
89. C11H19ORF12 C11H19ORF12 5149 0.95 - - - - - - 0.950 - - -
90. ETV5 ENSGALG00000005768 9679 0.949 - - - - - - 0.949 - - - ETS variant 5 [Source:NCBI gene;Acc:395749]
91. ESCO1 ENSGALG00000014936 739 0.947 - - - - - - 0.947 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
92. AP1S3 ENSGALG00000005171 2981 0.946 - - - - - - 0.946 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
93. LYRM4 ENSGALG00000027339 2917 0.945 - - - - - - 0.945 - - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
94. RHOT2 ENSGALG00000002497 1744 0.944 - - - - - - 0.944 - - - ras homolog family member T2 [Source:NCBI gene;Acc:427651]
95. USP5 ENSGALG00000014525 21883 0.943 - - - - - - 0.943 - - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
96. ZBTB26 ENSGALG00000042762 1920 0.943 - - - - - - 0.943 - - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
97. LMO4 ENSGALG00000006252 3686 0.943 - - - - - - 0.943 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
98. TSPAN13 ENSGALG00000027240 8999 0.943 - - - - - - 0.943 - - - tetraspanin 13 [Source:NCBI gene;Acc:420595]
99. AP1AR ENSGALG00000028807 2398 0.942 - - - - - - 0.942 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
100. ANXA11 ENSGALG00000043826 5189 0.941 - - - - - - 0.941 - - - annexin A11 [Source:NCBI gene;Acc:423637]

There are 931 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA