Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DDX28

Gene Name Gene ID Reads Annotation
DDX28 ENSGALG00000003415 979 DEAD-box helicase 28











Genes with expression patterns similar to DDX28

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DDX28 ENSGALG00000003415 979 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD-box helicase 28
2. DENND6A ENSGALG00000005656 831 1.572 - - - - - - 0.719 - 0.853 - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
3. NMI ENSGALG00000012480 2172 1.466 - - - - - - 0.753 - 0.713 - N-myc and STAT interactor [Source:HGNC Symbol;Acc:HGNC:7854]
4. PJA2 ENSGALG00000000264 1574 0.892 - - - - - - - - 0.892 - praja ring finger ubiquitin ligase 2, transcript variant X1
5. ZNF608 ENSGALG00000005016 273 0.885 - - - - - - - - 0.885 - zinc finger protein 608 [Source:HGNC Symbol;Acc:HGNC:29238]
6. VTI1A ENSGALG00000008880 279 0.882 - - - - - - - - 0.882 - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
7. SLC7A6OS ENSGALG00000035575 2878 0.88 - - - - - - - - 0.880 - solute carrier family 7 member 6 opposite strand [Source:NCBI gene;Acc:415621]
8. BRMS1L ENSGALG00000010093 4964 0.879 - - - - - - - - 0.879 - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
9. CEP104 ENSGALG00000000978 1130 0.876 - - - - - - - - 0.876 - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
10. CADM2 ENSGALG00000043393 810 0.872 - - - - - - 0.872 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
11. ACL ACL 1813 0.87 - - - - - - - - 0.870 -
12. C6H10ORF46 C6H10ORF46 1107 0.869 - - - - - - - - 0.869 -
13. SMPDL3B ENSGALG00000000737 223 0.867 - - - - - - - - 0.867 - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
14. DYNLT3 ENSGALG00000016259 340 0.866 - - - - - - - - 0.866 - dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:418580]
15. ASNS ENSGALG00000009748 11822 0.862 - - - - - - - - 0.862 - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
16. GMFB ENSGALG00000012208 894 0.86 - - - - - - - - 0.860 - glia maturation factor beta [Source:NCBI gene;Acc:423560]
17. TRIM71 ENSGALG00000019622 1633 0.858 - - - - - - 0.858 - - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
18. TYSND1 ENSGALG00000033807 716 0.856 - - - - - - - - 0.856 - trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
19. CDERMO-1 CDERMO-1 279 0.856 - - - - - - - - 0.856 -
20. NCF1 ENSGALG00000001189 334 0.855 - - - - - - - - 0.855 - neutrophil cytosolic factor 1 [Source:NCBI gene;Acc:417485]
21. GGA.16412 GGA.16412 846 0.853 - - - - - - - - 0.853 -
22. RNASEH1 ENSGALG00000016389 2694 0.85 - - - - - - - - 0.850 - ribonuclease H1 [Source:NCBI gene;Acc:395848]
23. FGB ENSGALG00000009262 1169 0.848 - - - - - - 0.848 - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
24. AHSA2 1504 0.847 - - - - - - - - 0.847 - AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
25. IPO8 ENSGALG00000012953 499 0.844 - - - - - - - - 0.844 - importin 8 [Source:HGNC Symbol;Acc:HGNC:9853]
26. ARL14EP ENSGALG00000012139 4690 0.842 - - - - - - - - 0.842 - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
27. KIAA1211 ENSGALG00000013771 135 0.839 - - - - - - - - 0.839 - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
28. DARS ENSGALG00000012355 2887 0.839 - - - - - - - - 0.839 - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
29. CGN ENSGALG00000000920 407 0.839 - - - - - - - - 0.839 - cingulin [Source:HGNC Symbol;Acc:HGNC:17429]
30. CLCN7 ENSGALG00000030826 3173 0.839 - - - - - - - - 0.839 - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
31. CCDC103 CCDC103 362 0.837 - - - - - - - - 0.837 -
32. GPSM1 ENSGALG00000001797 943 0.837 - - - - - - - - 0.837 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
33. VPS33A ENSGALG00000004440 2030 0.836 - - - - - - - - 0.836 - VPS33A, CORVET/HOPS core subunit, transcript variant X1
34. GSTA GSTA 3130 0.836 - - - - - - - - 0.836 -
35. PPIP5K2 ENSGALG00000015264 862 0.835 - - - - - - - - 0.835 - diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:29035]
36. TATDN3 ENSGALG00000009811 1851 0.833 - - - - - - - - 0.833 - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
37. GALT ENSGALG00000026195 2002 0.831 - - - - - - - - 0.831 - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
38. LCAT ENSGALG00000028928 484 0.831 - - - - - - 0.831 - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
39. TULP3 ENSGALG00000013424 2064 0.829 - - - - - - - - 0.829 - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
40. TDRD7 ENSGALG00000012350 594 0.829 - - - - - - - - 0.829 - tudor domain containing 7 [Source:NCBI gene;Acc:430492]
41. TMEM59 ENSGALG00000010746 4669 0.829 - - - - - - - - 0.829 - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
42. NKRF ENSGALG00000008645 3531 0.828 - - - - - - - - 0.828 - NFKB repressing factor [Source:NCBI gene;Acc:422370]
43. ANKRD54 ENSGALG00000012299 1588 0.827 - - - - - - - - 0.827 - ankyrin repeat domain 54, transcript variant X1
44. DIAPH1 DIAPH1 357 0.827 - - - - - - - - 0.827 -
45. SEP-05_15 SEP-05_15 568 0.827 - - - - - - - - 0.827 -
46. RABIF ENSGALG00000000436 6449 0.826 - - - - - - - - 0.826 - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
47. CARKD CARKD 2914 0.826 - - - - - - - - 0.826 -
48. LEMD3 ENSGALG00000009873 347 0.826 - - - - - - - - 0.826 - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
49. PKP2 ENSGALG00000012913 2547 0.824 - - - - - - - - 0.824 - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
50. CCDC171 ENSGALG00000015103 349 0.823 - - - - - - - - 0.823 - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
51. PIK3IP1 ENSGALG00000006942 8388 0.823 - - - - - - - - 0.823 - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
52. APBA2 ENSGALG00000003930 408 0.823 - - - - - - 0.823 - - - amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579]
53. FIBIN ENSGALG00000023904 3350 0.821 - - - - - - 0.821 - - - fin bud initiation factor homolog [Source:NCBI gene;Acc:426933]
54. CCDC104 CCDC104 6584 0.821 - - - - - - - - 0.821 -
55. DLG3 ENSGALG00000041900 3016 0.82 - - - - - - - - 0.820 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
56. BTG2 ENSGALG00000026858 6716 0.82 - - - - - - 0.820 - - - BTG anti-proliferation factor 2 [Source:HGNC Symbol;Acc:HGNC:1131]
57. RSFR 61 0.819 - - - - - - 0.819 - - - leukocyte ribonuclease A-2
58. LAMA5 486 0.818 - - - - - - - - 0.818 - laminin subunit alpha 5, transcript variant X3
59. SNW1 ENSGALG00000010501 17767 0.817 - - - - - - - - 0.817 - SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
60. HNF4G ENSGALG00000042621 484 0.817 - - - - - - 0.817 - - - hepatocyte nuclear factor 4 gamma [Source:HGNC Symbol;Acc:HGNC:5026]
61. FAM21A FAM21A 251 0.816 - - - - - - 0.816 - - -
62. SMARCD2 ENSGALG00000029304 11867 0.816 - - - - - - - - 0.816 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
63. ARHGAP15 ENSGALG00000012421 58 0.815 - - - - - - 0.815 - - - Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
64. MCCC2L ENSGALG00000011255 889 0.814 - - - - - - - - 0.814 - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
65. TAPT1 ENSGALG00000014486 2022 0.814 - - - - - - - - 0.814 - transmembrane anterior posterior transformation 1 [Source:NCBI gene;Acc:422824]
66. TVP23A ENSGALG00000007216 275 0.814 - - - - - - - - 0.814 - trans-golgi network vesicle protein 23 homolog A [Source:HGNC Symbol;Acc:HGNC:20398]
67. FAM221A ENSGALG00000010977 695 0.814 - - - - - - - - 0.814 - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]
68. HSDL1 ENSGALG00000003273 1108 0.814 - - - - - - - - 0.814 - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
69. TSPAN4 ENSGALG00000006837 150 0.813 - - - - - - 0.813 - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
70. FNDC3A ENSGALG00000017002 1652 0.811 - - - - - - 0.811 - - - fibronectin type III domain containing 3A [Source:NCBI gene;Acc:418863]
71. NCOA6 ENSGALG00000001182 83 0.811 - - - - - - 0.811 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
72. SOSTDC1 ENSGALG00000036836 1081 0.81 - - - - - - - - 0.810 - sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
73. BCL2L13 ENSGALG00000013037 780 0.81 - - - - - - - - 0.810 - BCL2 like 13 [Source:HGNC Symbol;Acc:HGNC:17164]
74. ENSGALG00000014900 ENSGALG00000014900 335 0.81 - - - - - - 0.810 - - -
75. MYCN ENSGALG00000016462 1930 0.81 - - - - - - - - 0.810 - MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
76. CEP70 ENSGALG00000012087 7992 0.809 - - - - - - - - 0.809 - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
77. PPP1R13B ENSGALG00000011548 88 0.809 - - - - - - - - 0.809 - protein phosphatase 1 regulatory subunit 13B [Source:HGNC Symbol;Acc:HGNC:14950]
78. EFTUD1 EFTUD1 3455 0.809 - - - - - - - - 0.809 -
79. DDHD2 ENSGALG00000042181 421 0.809 - - - - - - - - 0.809 - DDHD domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29106]
80. LAPTM4B ENSGALG00000045196 520 0.809 - - - - - - - - 0.809 - lysosomal protein transmembrane 4 beta [Source:HGNC Symbol;Acc:HGNC:13646]
81. FBXL18 ENSGALG00000004611 97 0.808 - - - - - - 0.808 - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
82. CETN2 ENSGALG00000007510 1688 0.808 - - - - - - - - 0.808 - centrin 2 [Source:NCBI gene;Acc:422303]
83. LMCD1 ENSGALG00000008349 928 0.808 - - - - - - 0.808 - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
84. PDE4D ENSGALG00000014727 53 0.806 - - - - - - 0.806 - - - phosphodiesterase 4D [Source:HGNC Symbol;Acc:HGNC:8783]
85. PSMG2 ENSGALG00000013863 351 0.805 - - - - - - - - 0.805 - proteasome assembly chaperone 2 [Source:HGNC Symbol;Acc:HGNC:24929]
86. WDPCP ENSGALG00000008866 272 0.805 - - - - - - 0.805 - - - WD repeat containing planar cell polarity effector [Source:HGNC Symbol;Acc:HGNC:28027]
87. ENSGALG00000020497 ENSGALG00000020497 446 0.805 - - - - - - - - 0.805 -
88. LOC770996 ENSGALG00000016570 635 0.805 - - - - - - 0.805 - - - L-gulonolactone oxidase-like
89. FKBP8 ENSGALG00000003357 942 0.805 - - - - - - - - 0.805 - FK506 binding protein 8 [Source:NCBI gene;Acc:420123]
90. CCDC77 ENSGALG00000012987 1267 0.803 - - - - - - - - 0.803 - coiled-coil domain containing 77 [Source:HGNC Symbol;Acc:HGNC:28203]
91. gga-mir-1725 gga-mir-1725 178 0.803 - - - - - - - - 0.803 -
92. MPP3 ENSGALG00000042521 1372 0.803 - - - - - - - - 0.803 - membrane palmitoylated protein 3 [Source:HGNC Symbol;Acc:HGNC:7221]
93. ZDHHC5 ENSGALG00000007362 296 0.801 - - - - - - 0.801 - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
94. ANKS1B ENSGALG00000011549 440 0.801 - - - - - - 0.801 - - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
95. TMEM69 ENSGALG00000010279 716 0.8 - - - - - - - - 0.800 - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
96. WDFY1 ENSGALG00000005158 2512 0.8 - - - - - - - - 0.800 - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
97. C16orf93 C16orf93 3351 0.799 - - - - - - - - 0.799 -
98. ACOT13 ENSGALG00000013632 5550 0.799 - - - - - - - - 0.799 - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
99. RPS6KA5 ENSGALG00000030580 218 0.799 - - - - - - - - 0.799 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]
100. ASB13 ENSGALG00000008401 181 0.798 - - - - - - 0.798 - - - ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]

There are 280 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA