Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DDX21

Gene Name Gene ID Reads Annotation
DDX21 ENSGALG00000004144 13105 DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]











Genes with expression patterns similar to DDX21

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DDX21 ENSGALG00000004144 13105 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
2. ATP2A2 ENSGALG00000032287 12734 1.65 - - - - 0.745 - 0.905 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
3. KERA ENSGALG00000011270 4204 1.482 - - - - 0.761 0.721 - - - - keratocan [Source:NCBI gene;Acc:373995]
4. MCM2 ENSGALG00000006037 13458 0.996 - - - - - - 0.996 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
5. PRDX6 ENSGALG00000003053 17928 0.994 - - - - - - 0.994 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
6. PHGDH ENSGALG00000002988 6912 0.991 - - - - - - 0.991 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
7. FAM103A1 17380 0.991 - - - - - - 0.991 - - - family with sequence similarity 103 member A1, transcript variant X2
8. POLR1C ENSGALG00000010349 7059 0.99 - - - - - - 0.990 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
9. ENSGALG00000004773 ENSGALG00000004773 10418 0.99 - - - - - - 0.990 - - -
10. MOB3A ENSGALG00000031729 9690 0.989 - - - - - - 0.989 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
11. HOXD8 ENSGALG00000037272 4338 0.989 - - - - - - 0.989 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
12. PTBP2 ENSGALG00000005552 3443 0.989 - - - - - - 0.989 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
13. CAND1 4541 0.989 - - - - - - 0.989 - - - cullin associated and neddylation dissociated 1
14. M6PR ENSGALG00000031681 9442 0.989 - - - - - - 0.989 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
15. TMEM120B ENSGALG00000004254 2819 0.989 - - - - - - 0.989 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
16. TMEM97 ENSGALG00000005702 2037 0.989 - - - - - - 0.989 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
17. ENSGALG00000014190 ENSGALG00000014190 5735 0.989 - - - - - - 0.989 - - -
18. CTU2 4818 0.989 - - - - - - 0.989 - - - cytosolic thiouridylase subunit 2, transcript variant X3
19. POLR2D ENSGALG00000002057 14548 0.989 - - - - - - 0.989 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
20. ABCC10 2213 0.988 - - - - - - 0.988 - - - ATP binding cassette subfamily C member 10, transcript variant X10
21. IMP4 ENSGALG00000029152 11669 0.988 - - - - - - 0.988 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
22. MRPL32 ENSGALG00000037258 6861 0.988 - - - - - - 0.988 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
23. BMP3 ENSGALG00000035052 3260 0.988 - - - - - - 0.988 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
24. EGFLAM ENSGALG00000003726 4588 0.988 - - - - - - 0.988 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
25. TMC1 ENSGALG00000015145 1180 0.988 - - - - - - 0.988 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
26. TMEM62 ENSGALG00000009260 1170 0.988 - - - - - - 0.988 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
27. PFDN4 ENSGALG00000007792 26514 0.988 - - - - - - 0.988 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
28. EIF3J ENSGALG00000008187 43570 0.987 - - - - - - 0.987 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
29. ATP5MC1 ENSGALG00000001330 37766 0.982 - - - - - - 0.982 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
30. FBN3 ENSGALG00000037625 23313 0.982 - - - - - - 0.982 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
31. SMC2 ENSGALG00000015691 34013 0.981 - - - - - - 0.981 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
32. DYNLL2 ENSGALG00000005522 17107 0.979 - - - - - - 0.979 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
33. ITGA1 ENSGALG00000014891 11378 0.978 - - - - - - 0.978 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
34. CHNTHL1 CHNTHL1 4976 0.978 - - - - - - 0.978 - - -
35. DENR ENSGALG00000003795 30805 0.974 - - - - - - 0.974 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
36. EIF3E ENSGALG00000037067 36561 0.972 - - - - 0.972 - - - - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
37. CALM_1 CALM_1 57812 0.952 - - - - - - 0.952 - - -
38. GNA13 ENSGALG00000036028 9791 0.949 - - - - - - - 0.949 - - G protein subunit alpha 13 [Source:HGNC Symbol;Acc:HGNC:4381]
39. ALDH1A2 ENSGALG00000004270 49483 0.935 - - - - - - 0.935 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
40. UQCRFS1 ENSGALG00000025819 66637 0.933 - - - - - - 0.933 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
41. WBP4 ENSGALG00000016949 5858 0.929 - - - - 0.929 - - - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
42. NDUFB9 ENSGALG00000042242 115459 0.909 - - - - 0.909 - - - - - NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
43. MRPS21 ENSGALG00000000456 35298 0.886 - - - - 0.886 - - - - - mitochondrial ribosomal protein S21 [Source:NCBI gene;Acc:426666]
44. RPL15 ENSGALG00000011290 415571 0.84 - - - - 0.840 - - - - - ribosomal protein L15 [Source:NCBI gene;Acc:428442]
45. PARVB ENSGALG00000014201 27559 0.833 - - - - - - 0.833 - - - parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
46. ENSGALG00000011687 ENSGALG00000011687 4553 0.833 - - - - 0.833 - - - - -
47. IGF1R ENSGALG00000040651 772 0.832 - - - - 0.832 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
48. SSPN ENSGALG00000014042 638 0.832 - - - - 0.832 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
49. CTSZ ENSGALG00000007462 630 0.832 - - - - 0.832 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
50. XPO7 ENSGALG00000001838 1875 0.832 - - - - 0.832 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
51. REST 2394 0.831 - - - - 0.831 - - - - - RE1 silencing transcription factor
52. ELL2 ENSGALG00000014678 1111 0.831 - - - - 0.831 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
53. DDX55 ENSGALG00000003298 2315 0.83 - - - - 0.830 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
54. RPS15A ENSGALG00000006771 287037 0.829 - - - - 0.829 - - - - - ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
55. EAPP ENSGALG00000010007 5080 0.829 - - - - 0.829 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
56. ENSGALG00000021397 ENSGALG00000021397 51155 0.829 - - - - 0.829 - - - - -
57. KNOP1 ENSGALG00000002042 6251 0.828 - - - - 0.828 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
58. ZBTB10 ENSGALG00000034376 3271 0.827 - - - - 0.827 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
59. DNAJC12 ENSGALG00000002769 1418 0.827 - - - - 0.827 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
60. RABEP1 ENSGALG00000001737 2650 0.826 - - - - 0.826 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
61. PDE6D ENSGALG00000033062 20177 0.825 - - - - 0.825 - - - - - phosphodiesterase 6D [Source:HGNC Symbol;Acc:HGNC:8788]
62. BAG4 ENSGALG00000003254 5751 0.825 - - - - 0.825 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
63. TRAPPC12 ENSGALG00000016387 2593 0.824 - - - - 0.824 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
64. TCP11L1 ENSGALG00000011688 2427 0.824 - - - - 0.824 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
65. CZH9ORF41 CZH9ORF41 3492 0.822 - - - - 0.822 - - - - -
66. COIL ENSGALG00000003158 7806 0.821 - - - - 0.821 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
67. NFASC ENSGALG00000031776 4264 0.821 - - - - 0.821 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
68. YY1 ENSGALG00000017388 1933 0.821 - - - - 0.821 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
69. TLCD1 ENSGALG00000003973 17569 0.82 - - - - 0.820 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
70. MRPS27 ENSGALG00000015002 6541 0.819 - - - - 0.819 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
71. WDR82 ENSGALG00000025904 4783 0.818 - - - - 0.818 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
72. NAP1L1 ENSGALG00000010238 14506 0.818 - - - - 0.818 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
73. POLR2B ENSGALG00000011387 4864 0.818 - - - - 0.818 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
74. CBWD1 ENSGALG00000010147 2765 0.818 - - - - 0.818 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
75. TLK2 ENSGALG00000000410 4690 0.817 - - - - 0.817 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
76. ATG5 ENSGALG00000015387 7752 0.816 - - - - 0.816 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
77. FERMT2 ENSGALG00000012425 5480 0.816 - - - - 0.816 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
78. TMEM165 ENSGALG00000027886 5468 0.815 - - - - 0.815 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
79. STK3 ENSGALG00000032850 6339 0.815 - - - - 0.815 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
80. CSNK1G1 ENSGALG00000030812 31618 0.814 - - - - 0.814 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
81. SSR2 ENSGALG00000000764 32190 0.814 - - - - 0.814 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
82. MKI67 ENSGALG00000025996 28136 0.813 - - - - 0.813 - - - - - marker of proliferation Ki-67, transcript variant X3
83. SIRT1 ENSGALG00000002761 9028 0.812 - - - - 0.812 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
84. POLR3F ENSGALG00000008749 5645 0.812 - - - - 0.812 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
85. SHROOM2 ENSGALG00000030802 4517 0.811 - - - - 0.811 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
86. IGBP1 ENSGALG00000044628 9200 0.81 - - - - 0.810 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
87. COMMD8 ENSGALG00000026279 13509 0.809 - - - - 0.809 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
88. LATS2 4776 0.808 - - - - 0.808 - - - - - large tumor suppressor kinase 2
89. FH ENSGALG00000013165 13669 0.808 - - - - 0.808 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
90. FBXO9 ENSGALG00000016320 9600 0.807 - - - - 0.807 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
91. RAB10 ENSGALG00000016535 5272 0.807 - - - - - - - 0.807 - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
92. AATF ENSGALG00000005420 6501 0.807 - - - - 0.807 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
93. CHERP ENSGALG00000003824 11489 0.805 - - - - - - 0.805 - - - calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
94. POLR2E ENSGALG00000002591 26405 0.805 - - - - - - 0.805 - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
95. CDC42SE2 ENSGALG00000027258 4725 0.805 - - - - 0.805 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
96. CTBPL ENSGALG00000007642 14238 0.804 - - - - - - - 0.804 - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
97. MRPL23 ENSGALG00000006561 13737 0.804 - - - - 0.804 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
98. TK2 ENSGALG00000034216 5394 0.804 - - - - 0.804 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
99. PLAA ENSGALG00000001782 5459 0.803 - - - - 0.803 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
100. MRPS25 ENSGALG00000008506 12131 0.803 - - - - 0.803 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]

There are 66 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA