Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for DDX20

Gene Name Gene ID Reads Annotation
DDX20 ENSGALG00000001504 3367 DEAD-box helicase 20 [Source:HGNC Symbol;Acc:HGNC:2743]











Genes with expression patterns similar to DDX20

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DDX20 ENSGALG00000001504 3367 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD-box helicase 20 [Source:HGNC Symbol;Acc:HGNC:2743]
2. SEC22A ENSGALG00000011697 7981 1.6 - - - - - - 0.725 0.875 - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
3. DYNC1I2 ENSGALG00000009551 5420 1.557 - - - - - - 0.813 0.744 - - dynein cytoplasmic 1 intermediate chain 2 [Source:NCBI gene;Acc:424151]
4. SRBD1 ENSGALG00000009990 4568 1.555 - - - - - - 0.775 0.780 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
5. CARS ENSGALG00000006427 7660 1.531 - - 0.708 - - - 0.823 - - - cysteinyl-tRNA synthetase [Source:NCBI gene;Acc:423086]
6. KLHL15 ENSGALG00000016345 1638 1.492 - - - - - - 0.734 0.758 - - kelch like family member 15 [Source:NCBI gene;Acc:418598]
7. RRP1B ENSGALG00000035696 12309 1.483 - - - - - - 0.748 0.735 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
8. NDUFA12 ENSGALG00000011325 19807 1.471 - - - - - - 0.717 0.754 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
9. EXOC2 ENSGALG00000012837 4914 1.453 - - - - - - 0.747 0.706 - - exocyst complex component 2 [Source:NCBI gene;Acc:420889]
10. ANAPC5 ENSGALG00000004179 4087 1.435 - - - - - - 0.727 0.708 - - anaphase promoting complex subunit 5 [Source:NCBI gene;Acc:416842]
11. EXOSC9 ENSGALG00000011884 3403 0.837 - - - - - - - 0.837 - - exosome component 9 [Source:NCBI gene;Acc:619530]
12. ATG4C ENSGALG00000010985 6102 0.826 - - - - - - 0.826 - - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
13. MOCS2 ENSGALG00000014906 4974 0.812 - - - - - - 0.812 - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
14. ENSGALG00000016380 ENSGALG00000016380 2784 0.811 - - - - - - 0.811 - - -
15. NUP50 ENSGALG00000014222 11743 0.811 - - - - - - 0.811 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
16. MAP3K7 ENSGALG00000015596 15164 0.81 - - - - - - 0.810 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
17. USE1 ENSGALG00000003703 4680 0.808 - - - - - - - 0.808 - - unconventional SNARE in the ER 1 [Source:NCBI gene;Acc:420134]
18. NIP7 ENSGALG00000000650 23932 0.806 - - - - - - - 0.806 - - NIP7, nucleolar pre-rRNA processing protein [Source:NCBI gene;Acc:415863]
19. YIPF6 ENSGALG00000035973 3333 0.806 - - - - - - - 0.806 - - Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
20. CDC42BPB ENSGALG00000011432 8220 0.805 - - - - - - 0.805 - - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
21. EVL ENSGALG00000011209 5440 0.801 - - - - - - 0.801 - - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
22. SEC24A ENSGALG00000006417 1805 0.799 - - - - - - 0.799 - - - Gallus gallus SEC24 homolog A, COPII coat complex component (SEC24A), mRNA. [Source:RefSeq mRNA;Acc:NM_001321593]
23. HSPBAP1 ENSGALG00000011677 1095 0.798 - - - - - - 0.798 - - - HSPB1 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16389]
24. TTC37 ENSGALG00000014670 5715 0.797 - - - - - - 0.797 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
25. FYTTD1 ENSGALG00000007581 9341 0.797 - - - - - - 0.797 - - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
26. TTC4 10377 0.791 - - - - - - 0.791 - - - tetratricopeptide repeat domain 4
27. SCFD1 ENSGALG00000009916 5756 0.791 - - - - - - - 0.791 - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
28. PSEN1 ENSGALG00000009320 15 0.789 - - - - - 0.789 - - - - presenilin 1 [Source:NCBI gene;Acc:373977]
29. PCDH8 ENSGALG00000036258 1945 0.789 - - - - - 0.789 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
30. KNTC1 ENSGALG00000004515 1417 0.789 - - - - - - 0.789 - - - kinetochore associated 1 [Source:HGNC Symbol;Acc:HGNC:17255]
31. C10orf88 ENSGALG00000000011 6026 0.788 - - - - - - - 0.788 - - chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:25822]
32. UMPS ENSGALG00000011770 11331 0.788 - - - - - - 0.788 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
33. ANKRD10 ENSGALG00000030125 3611 0.788 - - - - - - 0.788 - - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
34. ENSGALG00000001861 ENSGALG00000001861 10150 0.787 - - - - - - - 0.787 - -
35. C5orf28 C5orf28 6585 0.786 - - - - - - 0.786 - - -
36. DCTD ENSGALG00000010674 8396 0.785 - - - - - - - 0.785 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
37. CTDSPL2 ENSGALG00000008199 3534 0.782 - - - - - - 0.782 - - - CTD small phosphatase like 2 [Source:NCBI gene;Acc:415574]
38. CCDC6 ENSGALG00000003165 93 0.782 - - - - - 0.782 - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
39. CALML4 ENSGALG00000007979 6395 0.781 - - - - - - 0.781 - - - calmodulin like 4 [Source:NCBI gene;Acc:427515]
40. EHD3 ENSGALG00000009086 14407 0.781 - - - - - - 0.781 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
41. GPALPP1 ENSGALG00000031567 4221 0.78 - - - - - - 0.780 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
42. FAM177A1 ENSGALG00000010046 4318 0.779 - - - - - - 0.779 - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
43. UQCRC1 ENSGALG00000005789 23201 0.778 - - - - - - 0.778 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
44. SLC25A36 ENSGALG00000005283 4221 0.778 - - - - - - 0.778 - - - solute carrier family 25 member 36 [Source:NCBI gene;Acc:424817]
45. DGCR2 ENSGALG00000005891 8405 0.778 - - - - - - 0.778 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
46. EIF2B3 ENSGALG00000010140 7992 0.777 - - - - - - 0.777 - - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
47. NKX2-1 ENSGALG00000037632 7 0.776 - - - - - 0.776 - - - - NK2 homeobox 1 [Source:NCBI gene;Acc:395322]
48. ZBTB48 ENSGALG00000000637 1495 0.776 - - - - - - 0.776 - - - zinc finger and BTB domain containing 48 [Source:NCBI gene;Acc:419370]
49. BCLAF1 ENSGALG00000013935 7596 0.776 - - - - - - 0.776 - - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
50. C14orf1 C14orf1 14289 0.775 - - - - - - 0.775 - - -
51. ORC4 ENSGALG00000012448 8405 0.775 - - - - - - - 0.775 - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
52. BLMH ENSGALG00000004259 36907 0.774 - - - - - - - 0.774 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
53. STX16 ENSGALG00000007541 6458 0.774 - - - - - - 0.774 - - - syntaxin 16 [Source:NCBI gene;Acc:419315]
54. ACTN1 ENSGALG00000042458 10477 0.773 - - - - - - 0.773 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
55. IGBP1 ENSGALG00000044628 9200 0.773 - - - - - - 0.773 - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
56. DNAL4 ENSGALG00000043451 4469 0.773 - - - - - - - 0.773 - - dynein axonemal light chain 4 [Source:NCBI gene;Acc:418019]
57. ENSGALG00000009771 ENSGALG00000009771 10273 0.771 - - - - - - 0.771 - - -
58. CIB1 ENSGALG00000008302 13946 0.771 - - - - - - 0.771 - - - calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
59. HSPA4 ENSGALG00000040882 20966 0.77 - - - - - - 0.770 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
60. RNF214 ENSGALG00000036993 3729 0.77 - - - - - - 0.770 - - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
61. EIF2B1 ENSGALG00000003259 9491 0.77 - - - - - - 0.770 - - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
62. AP2A2 ENSGALG00000006799 13874 0.769 - - - - - - 0.769 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
63. RARS ENSGALG00000001850 23283 0.767 - - - - - - 0.767 - - - arginyl-tRNA synthetase [Source:NCBI gene;Acc:416168]
64. PARP1 ENSGALG00000009228 39433 0.766 - - - - - - 0.766 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
65. SURF1 ENSGALG00000033754 2130 0.765 - - - - - - 0.765 - - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
66. RNPS1 ENSGALG00000009288 13588 0.765 - - - - - - 0.765 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
67. CHN1 ENSGALG00000009293 6415 0.765 - - - - - - 0.765 - - - chimerin 1 [Source:NCBI gene;Acc:429021]
68. TMEM70 ENSGALG00000033568 10720 0.765 - - - - - - 0.765 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
69. PLEKHF1 ENSGALG00000004474 8 0.764 - - - - - 0.764 - - - - pleckstrin homology and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20764]
70. NEK6 ENSGALG00000001118 20333 0.764 - - - - - - 0.764 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
71. AMACR ENSGALG00000003326 2657 0.764 - - - - - - 0.764 - - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
72. ANKRD54 ENSGALG00000012299 1588 0.764 - - - - - - - 0.764 - - ankyrin repeat domain 54, transcript variant X1
73. TMEM184C ENSGALG00000010019 7856 0.762 - - - - - - 0.762 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
74. SF3B3 ENSGALG00000002531 19397 0.762 - - - - - - - 0.762 - - splicing factor 3b subunit 3, transcript variant X2
75. FANCL ENSGALG00000030022 7423 0.761 - - - - - - - 0.761 - - FA complementation group L [Source:NCBI gene;Acc:421202]
76. ZNHIT3 ENSGALG00000026031 8652 0.761 - - - - - - 0.761 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
77. ARL14EP ENSGALG00000012139 4690 0.761 - - - - - - - 0.761 - - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
78. TSEN54 3192 0.76 - - - - - - - 0.760 - - tRNA splicing endonuclease subunit 54, transcript variant X2
79. OPRL1 ENSGALG00000027965 53 0.759 - - - - - 0.759 - - - - Gallus gallus opioid related nociceptin receptor 1 (OPRL1), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318978]
80. LRIG3 ENSGALG00000009755 6655 0.759 - - - - - - 0.759 - - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
81. TBX3 ENSGALG00000036043 2888 0.758 - - - - - - 0.758 - - - T-box 3 [Source:NCBI gene;Acc:374202]
82. HEATR2 HEATR2 2143 0.758 - - - - - - 0.758 - - -
83. SKAP2 ENSGALG00000030081 13746 0.757 - - - - - - 0.757 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
84. NUDT4 ENSGALG00000011285 2998 0.757 - - - - - - 0.757 - - - nudix hydrolase 4, transcript variant X5
85. CDK5RAP2 ENSGALG00000041102 4042 0.756 - - - - - - - 0.756 - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
86. GCSH ENSGALG00000032679 29231 0.756 - - - - - - - 0.756 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
87. DERL1 ENSGALG00000033950 15074 0.756 - - - - - - 0.756 - - - derlin 1 [Source:NCBI gene;Acc:420350]
88. SRFBP1 ENSGALG00000005316 6826 0.756 - - - - - - 0.756 - - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
89. C20H20ORF111 C20H20ORF111 4029 0.756 - - - - - - - 0.756 - -
90. COX11 ENSGALG00000027190 4475 0.755 - - - - - - - 0.755 - - cytochrome c oxidase copper chaperone COX11 [Source:HGNC Symbol;Acc:HGNC:2261]
91. SCG5 ENSGALG00000009725 10 0.755 - - - - - 0.755 - - - - secretogranin V [Source:NCBI gene;Acc:769742]
92. XPO4 ENSGALG00000017132 2538 0.755 - - - - - - 0.755 - - - exportin 4 [Source:NCBI gene;Acc:428081]
93. HINT3 ENSGALG00000044342 5674 0.755 - - - - - - - 0.755 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
94. SWIP-1 SWIP-1 6024 0.754 - - - - - - 0.754 - - -
95. RBFOX1 ENSGALG00000034325 2133 0.754 - - - - - - 0.754 - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
96. SSR2 ENSGALG00000000764 32190 0.754 - - - - - - - 0.754 - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
97. EXO1 ENSGALG00000010748 7572 0.754 - - - - - - 0.754 - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
98. PAK1IP1 ENSGALG00000012724 10907 0.751 - - - - - - - 0.751 - - PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
99. RGL1 ENSGALG00000004728 3004 0.751 - - - - - - 0.751 - - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
100. NUDT7 ENSGALG00000034395 7396 0.751 - - - - - - - 0.751 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]

There are 287 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA