Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for DDX18

Gene Name Gene ID Reads Annotation
DDX18 ENSGALG00000012147 12463 DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]











Genes with expression patterns similar to DDX18

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DDX18 ENSGALG00000012147 12463 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
2. ZNF276 ENSGALG00000000513 2410 1.876 - - 0.939 - - - 0.937 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
3. CEP70 ENSGALG00000012087 7992 1.825 - - 0.857 - 0.968 - - - - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
4. PELI1 ENSGALG00000008837 11561 1.813 - - 0.880 - - - 0.933 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
5. COMMD8 ENSGALG00000026279 13509 1.752 - - - - 0.807 - 0.945 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
6. SAAL1 ENSGALG00000026111 8340 1.725 - - 0.776 - - - 0.949 - - - serum amyloid A like 1
7. MRPS27 ENSGALG00000015002 6541 1.717 - - 0.901 - 0.816 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
8. NAP1L1 ENSGALG00000010238 14506 1.715 - - - - 0.813 - - 0.902 - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
9. TSEN2 ENSGALG00000004981 1929 1.7 - - 0.956 - - - - - 0.744 - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
10. VDAC3 ENSGALG00000041463 21595 1.694 - - 0.715 - - - 0.979 - - - voltage dependent anion channel 3, transcript variant X9
11. BYSL ENSGALG00000003467 7555 1.684 - - - - - - - 0.893 0.791 - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
12. MOB4 ENSGALG00000008128 10322 1.675 - - 0.739 - - - 0.936 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
13. TBPL1 ENSGALG00000013981 3710 1.672 - - 0.865 - - - - - 0.807 - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
14. XPC ENSGALG00000006357 2484 1.667 - - 0.923 - - - - - 0.744 - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
15. gga-mir-1723 ENSGALG00000025386 6662 1.658 - - 0.717 - - - 0.941 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
16. TLK2 ENSGALG00000000410 4690 1.65 - - 0.830 - 0.820 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
17. TRIP11 ENSGALG00000010763 3146 1.643 - - 0.835 - - - - - 0.808 - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
18. IGDCC4 ENSGALG00000007410 5457 1.642 - - 0.852 - 0.790 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
19. MRE11A MRE11A 5754 1.635 - - 0.745 - - - - 0.890 - -
20. GBAS 18453 1.629 - - 0.874 - 0.755 - - - - - glioblastoma amplified sequence
21. LRR1 ENSGALG00000012230 1062 1.627 - - 0.889 - - - - - 0.738 - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
22. NCAPG2 ENSGALG00000006525 2319 1.624 - - - - - - - 0.892 - 0.732 non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
23. RUFY2 1442 1.616 - - 0.891 - - - - - 0.725 - RUN and FYVE domain containing 2, transcript variant X1
24. PSPC1 ENSGALG00000017142 13036 1.608 - - - - 0.796 - - 0.812 - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
25. ENSGALG00000014852 ENSGALG00000014852 15288 1.606 - - - - 0.792 - - 0.814 - -
26. PCBP4 ENSGALG00000027695 7937 1.605 - - 0.817 - 0.788 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
27. INVS ENSGALG00000013441 1123 1.574 - - 0.847 - - - - - 0.727 - inversin [Source:NCBI gene;Acc:395234]
28. RIT1 ENSGALG00000014647 7174 1.559 - - 0.802 - - - - - 0.757 - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
29. RHOT1 ENSGALG00000003397 5149 1.537 - - 0.827 - - - - - - 0.710 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
30. MRPL46 ENSGALG00000006782 5033 1.53 - - 0.805 - - - - - 0.725 - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
31. RABEP1 ENSGALG00000001737 2650 1.527 - - - - 0.819 - - - 0.708 - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
32. SSR2 ENSGALG00000000764 32190 1.516 - - - - 0.811 - - - - 0.705 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
33. B3GALTL B3GALTL 4128 1.511 - - 0.806 - - - - - - 0.705
34. STAG2 ENSGALG00000008482 13629 0.993 - - - - - - 0.993 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
35. TAF12 ENSGALG00000000991 8709 0.986 - - - - - - 0.986 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
36. SNX17 ENSGALG00000032468 13519 0.985 - - - - - - 0.985 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
37. LOC407092 ENSGALG00000013809 10706 0.982 - - - - - - 0.982 - - - AD012Z, transcript variant X5
38. USP10 ENSGALG00000005674 7768 0.97 - - - - 0.970 - - - - - ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
39. SLC1A3 ENSGALG00000003582 2283 0.97 - - - - 0.970 - - - - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
40. NHP2L1 NHP2L1 12124 0.969 - - - - - - - 0.969 - -
41. PSMC3 ENSGALG00000008108 22922 0.969 - - - - - - - 0.969 - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
42. BTG1 ENSGALG00000011276 17496 0.967 - - - - 0.967 - - - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
43. ARID4B ENSGALG00000034003 5364 0.965 - - - - 0.965 - - - - - AT-rich interaction domain 4B [Source:HGNC Symbol;Acc:HGNC:15550]
44. FAM53A ENSGALG00000015713 3795 0.955 - - - - 0.955 - - - - - family with sequence similarity 53 member A [Source:NCBI gene;Acc:378905]
45. PLEKHG5 ENSGALG00000027476 42 0.954 - - 0.954 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
46. GRIK3 ENSGALG00000002098 111 0.953 - - 0.953 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
47. POMC ENSGALG00000016600 99 0.953 - - 0.953 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
48. RHOC ENSGALG00000001569 53 0.953 - - 0.953 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
49. KIAA0195 KIAA0195 48 0.953 - - 0.953 - - - - - - -
50. SORCS1 ENSGALG00000008465 468 0.952 - - 0.952 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
51. MGMT ENSGALG00000042949 53 0.952 - - 0.952 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
52. ANKRD10 ENSGALG00000030125 3611 0.951 - - - - - - - 0.951 - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
53. MT1 MT1 218 0.951 - - 0.951 - - - - - - -
54. ENSGALG00000023180 ENSGALG00000023180 83 0.951 - - 0.951 - - - - - - -
55. ACOT9 ENSGALG00000016351 330 0.95 - - 0.950 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
56. NUDC ENSGALG00000000895 17844 0.949 - - - - 0.949 - - - - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
57. NCAPD3 ENSGALG00000001491 221 0.949 - - 0.949 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
58. TMEM97 ENSGALG00000005702 2037 0.948 - - 0.948 - - - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
59. POLE3 ENSGALG00000008873 9161 0.948 - - - - - - - 0.948 - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
60. CDC27 ENSGALG00000000596 12014 0.948 - - - - - - 0.948 - - - cell division cycle 27 [Source:NCBI gene;Acc:419960]
61. SNX9 ENSGALG00000013710 5295 0.947 - - - - - - - 0.947 - - sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]
62. FBXO34 ENSGALG00000032563 656 0.946 - - 0.946 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
63. MBNL3 ENSGALG00000032045 10980 0.946 - - - - - - - 0.946 - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
64. ADAMTS2 ENSGALG00000032974 141 0.946 - - 0.946 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
65. GOLGA2 ENSGALG00000004881 677 0.945 - - 0.945 - - - - - - - golgin A2, transcript variant X7
66. LHFP 167 0.945 - - 0.945 - - - - - - - lipoma HMGIC fusion partner
67. PPP3CB ENSGALG00000005243 8794 0.945 - - - - - - 0.945 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
68. CTNNBL1 ENSGALG00000006817 6765 0.945 - - - - - - 0.945 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
69. ENTPD5 ENSGALG00000010202 69 0.945 - - 0.945 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
70. MYBL2 ENSGALG00000003503 15875 0.945 - - - - - - 0.945 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
71. LRP2 ENSGALG00000010858 363 0.944 - - 0.944 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
72. GALNTL4 GALNTL4 3548 0.944 - - - - - - 0.944 - - -
73. CDC5L ENSGALG00000016704 22893 0.944 - - - - - - 0.944 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
74. WBSCR17 581 0.944 - - 0.944 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
75. APITD1 APITD1 11830 0.944 - - - - - - 0.944 - - -
76. USO1 ENSGALG00000010878 9506 0.944 - - - - - - 0.944 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
77. RNF13 ENSGALG00000010411 8749 0.944 - - - - - - 0.944 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
78. SERBP1 ENSGALG00000011229 30489 0.944 - - - - - - 0.944 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
79. EIF2AK2 ENSGALG00000010560 749 0.943 - - 0.943 - - - - - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
80. C8H1ORF52 C8H1ORF52 118 0.943 - - 0.943 - - - - - - -
81. CCNB3 ENSGALG00000025810 2115 0.943 - - 0.943 - - - - - - - cyclin B3 [Source:NCBI gene;Acc:396167]
82. LYPD6B ENSGALG00000028759 831 0.943 - - 0.943 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
83. IP6K1 ENSGALG00000002510 827 0.943 - - 0.943 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
84. TTF1 4214 0.942 - - - - - - 0.942 - - - transcription termination factor 1
85. LGALS3 ENSGALG00000012173 3306 0.942 - - 0.942 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
86. LOC424109 ENSGALG00000008738 3932 0.942 - - - - - - 0.942 - - - alpha-aspartyl dipeptidase
87. MMADHC ENSGALG00000012473 9026 0.941 - - - - - - 0.941 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
88. C19H17ORF85 C19H17ORF85 2538 0.941 - - 0.941 - - - - - - -
89. FHL3 ENSGALG00000035187 9753 0.941 - - - - - - 0.941 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
90. C6H10ORF32 C6H10ORF32 7694 0.941 - - - - - - 0.941 - - -
91. CCDC90B ENSGALG00000037072 5088 0.941 - - - - - - 0.941 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
92. GLT8D1 ENSGALG00000001642 4232 0.941 - - - - - - 0.941 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
93. GCAT ENSGALG00000012312 7906 0.941 - - - - - - 0.941 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
94. MRPS15 ENSGALG00000044433 15356 0.941 - - - - - - 0.941 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
95. POLB ENSGALG00000040828 7462 0.94 - - - - - - 0.940 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
96. ABRACL ENSGALG00000013826 19445 0.94 - - - - - - 0.940 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
97. VRTN ENSGALG00000010232 692 0.94 - - 0.940 - - - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
98. TMEM200C ENSGALG00000030210 1434 0.94 - - 0.940 - - - - - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
99. DIS3 ENSGALG00000016930 3696 0.94 - - - - - - 0.940 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
100. NOB1 ENSGALG00000000693 15442 0.939 - - - - - - 0.939 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]

There are 660 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA