Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DDB2

Gene Name Gene ID Reads Annotation
DDB2 ENSGALG00000008218 1513 damage specific DNA binding protein 2 [Source:NCBI gene;Acc:423185]











Genes with expression patterns similar to DDB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DDB2 ENSGALG00000008218 1513 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 damage specific DNA binding protein 2 [Source:NCBI gene;Acc:423185]
2. FAM35A 1187 0.805 - - - - - - - - 0.805 - family with sequence similarity 35 member A
3. SULT2B1L1 ENSGALG00000023472 569 0.8 - - - - - - - - - 0.800 sulfotransferase family cytosolic 2B member 1-like 1
4. COL4A6 ENSGALG00000008266 6374 0.786 - - - - - - - - 0.786 - collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]
5. LAPTM5 ENSGALG00000038636 18 0.783 - - - - 0.783 - - - - - lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
6. ZFAND5 ENSGALG00000015144 9053 0.778 - - - - - - - - 0.778 - zinc finger AN1-type containing 5 [Source:NCBI gene;Acc:427254]
7. GRM1 ENSGALG00000012297 41 0.769 - - - - 0.769 - - - - - glutamate metabotropic receptor 1 [Source:HGNC Symbol;Acc:HGNC:4593]
8. ACSL3 ENSGALG00000005206 1763 0.767 - - - - - - - - - 0.767 acyl-CoA synthetase long chain family member 3 [Source:HGNC Symbol;Acc:HGNC:3570]
9. TNPO1 ENSGALG00000015014 57 0.766 - - - - 0.766 - - - - - transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]
10. BTBD19 ENSGALG00000028978 20 0.765 - - - - 0.765 - - - - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
11. CDH6 ENSGALG00000012917 17 0.765 - - - - 0.765 - - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
12. CLGN ENSGALG00000009826 54 0.765 - - - - 0.765 - - - - - calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
13. ST8SIA1 ENSGALG00000013211 14 0.765 - - - - 0.765 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
14. ENSGALG00000015097 ENSGALG00000015097 93 0.76 - - - - 0.760 - - - - -
15. COLEC11 ENSGALG00000037309 107 0.759 - - - - 0.759 - - - - - collectin subfamily member 11 [Source:NCBI gene;Acc:428649]
16. LCAT ENSGALG00000028928 484 0.758 - - - - 0.758 - - - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
17. CERKL ENSGALG00000008910 70 0.757 - - - - 0.757 - - - - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
18. CENPV ENSGALG00000004503 3032 0.756 - - - - - - - - 0.756 - centromere protein V
19. NMRK2 ENSGALG00000025751 57 0.755 - - - - 0.755 - - - - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
20. NUAK1 ENSGALG00000012662 411 0.755 - - - - 0.755 - - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
21. gga-mir-6596 ENSGALG00000026117 2893 0.752 - - - - - - - - - 0.752 gga-mir-6596 [Source:miRBase;Acc:MI0022416]
22. PANK2 ENSGALG00000015978 753 0.747 - - - - 0.747 - - - - - pantothenate kinase 2 [Source:HGNC Symbol;Acc:HGNC:15894]
23. SEMA7A ENSGALG00000001412 1505 0.747 - - - - 0.747 - - - - - semaphorin 7A (John Milton Hagen blood group) [Source:NCBI gene;Acc:415298]
24. ALPI ENSGALG00000023866 19 0.747 - - - - 0.747 - - - - - alkaline phosphatase, intestinal, transcript variant X2
25. C9orf171 C9orf171 35 0.746 - - - - 0.746 - - - - -
26. MMP23B ENSGALG00000001392 53 0.746 - - - - 0.746 - - - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
27. LMBRD1 ENSGALG00000016174 3469 0.745 - - - - - - - 0.745 - - LMBR1 domain containing 1 [Source:NCBI gene;Acc:421874]
28. LHFP 167 0.743 - - - - 0.743 - - - - - lipoma HMGIC fusion partner
29. SORCS3 ENSGALG00000008434 136 0.742 - - - - 0.742 - - - - - sortilin related VPS10 domain containing receptor 3 [Source:HGNC Symbol;Acc:HGNC:16699]
30. LXN ENSGALG00000009651 128 0.741 - - - - 0.741 - - - - - latexin [Source:NCBI gene;Acc:771519]
31. MESDC2 MESDC2 11010 0.74 - - - - - - - - 0.740 -
32. EMP1 ENSGALG00000011803 351 0.739 - - - - 0.739 - - - - - epithelial membrane protein 1 [Source:NCBI gene;Acc:417964]
33. KLHL4 ENSGALG00000006877 1121 0.739 - - - - - - - 0.739 - - kelch like family member 4 [Source:HGNC Symbol;Acc:HGNC:6355]
34. PLXNA4 ENSGALG00000006473 125 0.737 - - - - 0.737 - - - - - plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
35. MAFF ENSGALG00000012277 3392 0.736 - - - - - - - - - 0.736 MAF bZIP transcription factor F [Source:NCBI gene;Acc:395519]
36. LEPREL4 LEPREL4 5609 0.734 - - - - - - - - 0.734 -
37. FOPNL ENSGALG00000006532 2922 0.73 - - - - 0.730 - - - - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
38. DDX6 ENSGALG00000033064 2193 0.73 - - - - 0.730 - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
39. GSKIP ENSGALG00000011088 3421 0.728 - - - - - - - - 0.728 - GSK3B interacting protein [Source:NCBI gene;Acc:423442]
40. IFNGR2 ENSGALG00000032660 2634 0.728 - - - - - - - 0.728 - - interferon gamma receptor 2 [Source:NCBI gene;Acc:418502]
41. RFX3 ENSGALG00000010179 305 0.727 - - - - - - - - - 0.727 regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
42. SLC37A4 ENSGALG00000007716 2263 0.725 - - - - - - - - 0.725 - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
43. SMCR8 ENSGALG00000024082 44 0.724 - - - - 0.724 - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
44. STC2 ENSGALG00000002893 2119 0.723 - - - - 0.723 - - - - - stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]
45. COL22A1 ENSGALG00000038022 544 0.723 - - - - 0.723 - - - - - collagen type XXII alpha 1 chain [Source:NCBI gene;Acc:420315]
46. C1H11ORF70 ENSGALG00000017189 395 0.722 - - - - 0.722 - - - - - chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
47. DPP7 ENSGALG00000038145 4888 0.722 - - - - - - - - 0.722 - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
48. AGMO ENSGALG00000010792 76 0.718 - - - - 0.718 - - - - - alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
49. TTC19 ENSGALG00000004416 1875 0.715 - - - - - - - 0.715 - - tetratricopeptide repeat domain 19 [Source:HGNC Symbol;Acc:HGNC:26006]
50. DCLK1 ENSGALG00000041263 40 0.71 - - - - 0.710 - - - - - doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
51. ECHDC1 ENSGALG00000014828 958 0.71 - - - - - - - - - 0.710 ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
52. BICD1 ENSGALG00000012934 112 0.71 - - - - - - - - 0.710 - BICD cargo adaptor 1 [Source:HGNC Symbol;Acc:HGNC:1049]
53. CHID1 ENSGALG00000006830 964 0.709 - - - - - - - 0.709 - - chitinase domain containing 1 [Source:NCBI gene;Acc:423103]
54. H4-I H4-I 2327 0.709 - - - - 0.709 - - - - -
55. HMGCR ENSGALG00000014948 2514 0.709 - - - - - - - - 0.709 - 3-hydroxy-3-methylglutaryl-CoA reductase [Source:NCBI gene;Acc:395145]
56. USP36 ENSGALG00000037018 783 0.708 - - - - 0.708 - - - - - ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
57. ENSGALG00000021439 ENSGALG00000021439 628 0.706 - - - - - - - - - 0.706
58. KCNG1 ENSGALG00000007980 26 0.705 - - - - 0.705 - - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
59. DIO1 ENSGALG00000010736 87 0.705 - - - - 0.705 - - - - - iodothyronine deiodinase 1 [Source:NCBI gene;Acc:395940]
60. XKR8 ENSGALG00000030305 1288 0.704 - - - - - - - 0.704 - - XK related 8 [Source:NCBI gene;Acc:724081]
61. LRRK2 ENSGALG00000007161 66 0.703 - - - - 0.703 - - - - - leucine rich repeat kinase 2 [Source:NCBI gene;Acc:427844]
62. ACP2 ENSGALG00000008211 77 0.702 - - - - 0.702 - - - - - acid phosphatase 2, lysosomal [Source:NCBI gene;Acc:428864]
63. SCAF4 ENSGALG00000033965 2027 0.702 - - - - - - - - - 0.702 SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
64. GK5 ENSGALG00000002729 284 0.702 - - - - - - - - - 0.702 glycerol kinase 5 (putative) [Source:NCBI gene;Acc:424779]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA