Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DDB1

Gene Name Gene ID Reads Annotation
DDB1 ENSGALG00000042333 275 damage specific DNA binding protein 1 [Source:NCBI gene;Acc:374050]











Genes with expression patterns similar to DDB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DDB1 ENSGALG00000042333 275 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 damage specific DNA binding protein 1 [Source:NCBI gene;Acc:374050]
2. ENSGALG00000026913 ENSGALG00000026913 12 1.755 - - - - - - - 0.945 - 0.810
3. ENSGALG00000024035 ENSGALG00000024035 544 1.629 - - - 0.756 - - - 0.873 - -
4. LRRN4 ENSGALG00000008815 481 1.469 - - - - 0.763 - - 0.706 - - leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
5. P4HB ENSGALG00000038290 286 0.964 - - - - - - - 0.964 - - prolyl 4-hydroxylase subunit beta [Source:NCBI gene;Acc:374091]
6. POLR1A ENSGALG00000038160 236 0.956 - - - - - - - 0.956 - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
7. PAPSS2 ENSGALG00000003689 278 0.954 - - - - - - - 0.954 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Source:HGNC Symbol;Acc:HGNC:8604]
8. TMEM45B ENSGALG00000001203 48 0.954 - - - - - - - 0.954 - - transmembrane protein 45B [Source:HGNC Symbol;Acc:HGNC:25194]
9. PLXNC1 ENSGALG00000011309 69 0.952 - - - - - - - 0.952 - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
10. PRC1 ENSGALG00000012836 20 0.951 - - - - - - - - - 0.951 protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
11. MIF4GD ENSGALG00000026715 41 0.946 - - - - - - - 0.946 - - MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
12. AVP ENSGALG00000014117 19 0.945 - - - - - - - 0.945 - - arginine vasopressin [Source:NCBI gene;Acc:396101]
13. METTL24 ENSGALG00000041120 60 0.945 - - - - - - - 0.945 - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
14. OGN ENSGALG00000026736 223 0.945 - - - - - - - 0.945 - - osteoglycin [Source:NCBI gene;Acc:374039]
15. ADAM17 ENSGALG00000016427 49 0.945 - - - - - - - 0.945 - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
16. ENSGALG00000027352 ENSGALG00000027352 69 0.944 - - - - - - - 0.944 - -
17. RAB19 ENSGALG00000012850 155 0.944 - - - - - - - 0.944 - - RAB19, member RAS oncogene family [Source:NCBI gene;Acc:418113]
18. TGM4 ENSGALG00000033171 19 0.943 - - - - - - - 0.943 - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
19. WNT16 ENSGALG00000028069 157 0.943 - - - - - - - 0.943 - - Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]
20. FHL1 ENSGALG00000006190 22 0.942 - - - - - - - 0.942 - - four and a half LIM domains 1 [Source:HGNC Symbol;Acc:HGNC:3702]
21. PTDSS2 ENSGALG00000004300 682 0.942 - - - - - - - 0.942 - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
22. ABCA4 ENSGALG00000005752 15 0.941 - - - - - - - 0.941 - - ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
23. KLHL32 68 0.94 - - - - - - - 0.940 - - kelch like family member 32, transcript variant X3
24. OSBP ENSGALG00000030548 439 0.938 - - - - - - - 0.938 - - oxysterol binding protein [Source:HGNC Symbol;Acc:HGNC:8503]
25. ENSGALG00000021106 ENSGALG00000021106 35 0.938 - - - - - - - 0.938 - -
26. SOD3 ENSGALG00000018557 16 0.937 - - - - - - - 0.937 - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
27. ENSGALG00000016213 ENSGALG00000016213 33 0.935 - - - - - - - 0.935 - -
28. LOX ENSGALG00000028063 1488 0.934 - - - - - - - 0.934 - - lysyl oxidase [Source:NCBI gene;Acc:396474]
29. ARSD ENSGALG00000016648 33 0.933 - - - - - - - 0.933 - - arylsulfatase D, transcript variant X1
30. BAAT ENSGALG00000040619 579 0.932 - - - - - - - 0.932 - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
31. C1QA ENSGALG00000021569 343 0.926 - - - - - - - 0.926 - - complement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]
32. RBBP8NL ENSGALG00000045938 89 0.926 - - - - - - - 0.926 - - RBBP8 N-terminal like [Source:HGNC Symbol;Acc:HGNC:16144]
33. SELP 28 0.926 - - - - - - - 0.926 - - selectin P, transcript variant X9
34. CYP3A4 ENSGALG00000004436 75 0.925 - - - - - - - 0.925 - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
35. MAT2A ENSGALG00000015366 17 0.923 - - - - - - - 0.923 - - methionine adenosyltransferase 2A, transcript variant X1
36. KSR1 ENSGALG00000005685 78 0.923 - - - - - - - 0.923 - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
37. FBXL18 ENSGALG00000004611 97 0.922 - - - - - - - 0.922 - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
38. IFT88 1241 0.921 - - - - - - - 0.921 - - intraflagellar transport 88, transcript variant X3
39. PC7 PC7 1105 0.92 - - - - - - - 0.920 - -
40. GLOD5 ENSGALG00000025991 17 0.92 - - - - - - - 0.920 - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
41. TRUB1 ENSGALG00000009091 1005 0.919 - - - - - - - 0.919 - - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
42. C4orf47 ENSGALG00000013287 44 0.919 - - - - - - - 0.919 - - chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]
43. STK24 ENSGALG00000016885 442 0.919 - - - - - - - 0.919 - - serine/threonine kinase 24 [Source:NCBI gene;Acc:418780]
44. GRHPR ENSGALG00000005423 1567 0.918 - - - - - - - 0.918 - - glyoxylate and hydroxypyruvate reductase [Source:HGNC Symbol;Acc:HGNC:4570]
45. UGT8L ENSGALG00000005599 93 0.914 - - - - - - - 0.914 - - UDP glycosyltransferase 8-like
46. GJB1 ENSGALG00000005541 261 0.911 - - - - - - - 0.911 - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
47. CCDC102A ENSGALG00000029999 324 0.91 - - - - - - - 0.910 - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
48. TMEM248 ENSGALG00000033954 248 0.91 - - - - - - - 0.910 - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
49. HPGD ENSGALG00000010769 5 0.91 - - - - - - - - - 0.910 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
50. SMARCD3 ENSGALG00000043137 401 0.909 - - - - - - - 0.909 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]
51. CHD6 477 0.905 - - - - - - - 0.905 - - chromodomain helicase DNA binding protein 6, transcript variant X10
52. NTNG2 ENSGALG00000003677 73 0.905 - - - - - - - 0.905 - - netrin G2 [Source:HGNC Symbol;Acc:HGNC:14288]
53. PRKAA1 ENSGALG00000014832 547 0.9 - - - - - - - 0.900 - - protein kinase AMP-activated catalytic subunit alpha 1 [Source:NCBI gene;Acc:427185]
54. ENSGALG00000001886 ENSGALG00000001886 1024 0.895 - - - - - - - 0.895 - -
55. CHRNA6 ENSGALG00000015382 31 0.894 - - - - - - - 0.894 - - cholinergic receptor nicotinic alpha 6 subunit [Source:NCBI gene;Acc:396321]
56. ORC6 ENSGALG00000004342 454 0.89 - - - - - - - 0.890 - - origin recognition complex subunit 6 [Source:NCBI gene;Acc:415749]
57. TNK2 ENSGALG00000027983 144 0.888 - - - - - - - 0.888 - - tyrosine kinase non receptor 2, transcript variant X7
58. DAG1 ENSGALG00000037784 1012 0.888 - - - - - - - 0.888 - - dystroglycan 1 [Source:NCBI gene;Acc:100049058]
59. SERPINF2 ENSGALG00000002987 236 0.886 - - - - - - - 0.886 - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
60. ZNF143 ENSGALG00000005787 345 0.879 - - - 0.879 - - - - - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
61. C5 ENSGALG00000001565 142 0.878 - - - - - - - 0.878 - - complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
62. ENSGALG00000014825 ENSGALG00000014825 491 0.877 - - - - - - - 0.877 - -
63. VDAC1 ENSGALG00000006503 864 0.874 - - - - - - - 0.874 - - voltage dependent anion channel 1 [Source:NCBI gene;Acc:416320]
64. KLF8 ENSGALG00000007570 1651 0.874 - - - - - - - 0.874 - - Kruppel-like factor 8, transcript variant X6
65. LANCL1 ENSGALG00000002921 571 0.872 - - - - - - - 0.872 - - LanC like 1 [Source:NCBI gene;Acc:424006]
66. NR0B1 ENSGALG00000016287 481 0.872 - - - - - - - 0.872 - - nuclear receptor subfamily 0 group B member 1 [Source:NCBI gene;Acc:395285]
67. EREG ENSGALG00000010864 46 0.87 - - - - - - - 0.870 - - epiregulin [Source:NCBI gene;Acc:408036]
68. SH2D4A ENSGALG00000010122 206 0.865 - - - - - - - 0.865 - - SH2 domain containing 4A [Source:HGNC Symbol;Acc:HGNC:26102]
69. ACOX2 ENSGALG00000007132 47 0.864 - - - 0.864 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
70. MMD2 ENSGALG00000004530 167 0.864 - - - - - - - 0.864 - - monocyte to macrophage differentiation associated 2 [Source:HGNC Symbol;Acc:HGNC:30133]
71. EPHB6 ENSGALG00000014749 30 0.864 - - - - - - - - - 0.864 EPH receptor B6 [Source:NCBI gene;Acc:418308]
72. LGR5 ENSGALG00000010163 2931 0.864 - - - - - - - 0.864 - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
73. NUDT13 ENSGALG00000004319 341 0.86 - - - - - - - 0.860 - - nudix hydrolase 13 [Source:HGNC Symbol;Acc:HGNC:18827]
74. ES1ML2 ENSGALG00000007526 179 0.855 - - - - - - - 0.855 - - ES1 protein homolog, mitochondrial-like 2
75. NOTCH2 ENSGALG00000002922 3272 0.855 - - - - - - - 0.855 - - notch 2 [Source:NCBI gene;Acc:374031]
76. ARHGEF5 ENSGALG00000017276 32 0.855 - - - 0.855 - - - - - - Rho guanine nucleotide exchange factor 5, transcript variant X5
77. GOSR1 ENSGALG00000004326 1556 0.852 - - - - - - - 0.852 - - golgi SNAP receptor complex member 1 [Source:NCBI gene;Acc:417591]
78. C1orf159 ENSGALG00000027363 1672 0.852 - - - - - - - 0.852 - - chromosome 1 open reading frame 159 [Source:HGNC Symbol;Acc:HGNC:26062]
79. RCAN1 ENSGALG00000016014 95 0.851 - - - - 0.851 - - - - - regulator of calcineurin 1 [Source:NCBI gene;Acc:418510]
80. C12ORF32 C12ORF32 768 0.85 - - - - - - - 0.850 - -
81. CIDEA ENSGALG00000034500 405 0.849 - - - - - - - 0.849 - - cell death-inducing DFFA-like effector a [Source:NCBI gene;Acc:768659]
82. CP ENSGALG00000030773 119 0.845 - - - 0.845 - - - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
83. NUP160 ENSGALG00000043074 46 0.844 - - - 0.844 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
84. HTR1E ENSGALG00000015826 11 0.843 - - - 0.843 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
85. PITHD1 ENSGALG00000003986 11470 0.843 - - - - - - - 0.843 - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
86. ZPBP2 ENSGALG00000013484 14 0.843 - - - 0.843 - - - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
87. STRIP1 ENSGALG00000037995 621 0.841 - - - - - - - 0.841 - - striatin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25916]
88. NMRK1 ENSGALG00000015156 88 0.839 - - - - 0.839 - - - - - nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:HGNC:26057]
89. UBOX5 ENSGALG00000035134 1705 0.838 - - - - - - - 0.838 - - U-box domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17777]
90. PCNXL4 PCNXL4 58 0.838 - - - - 0.838 - - - - -
91. ZDHHC8 ENSGALG00000002124 35 0.838 - - - 0.838 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
92. LOC415478 ENSGALG00000021171 100 0.837 - - - - - - - 0.837 - - transmembrane protein 2-like, transcript variant X2
93. MTERFD3 MTERFD3 20 0.837 - - - 0.837 - - - - - -
94. SMARCAD1 ENSGALG00000037339 149 0.835 - - - - 0.835 - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
95. MXRA8 ENSGALG00000001561 181 0.835 - - - - - - - 0.835 - - matrix remodeling associated 8 [Source:NCBI gene;Acc:395347]
96. GLB1L2 ENSGALG00000001604 4057 0.834 - - - - - - - 0.834 - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
97. RNASET2 ENSGALG00000011426 40 0.834 - - - - 0.834 - - - - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
98. ZNF335 ENSGALG00000041370 4740 0.834 - - - - - - - 0.834 - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
99. VEPH1 ENSGALG00000009682 51 0.834 - - - 0.834 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
100. ENSGALG00000028221 ENSGALG00000028221 1663 0.832 - - - - - - - 0.832 - -

There are 242 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA