Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DCTN3

Gene Name Gene ID Reads Annotation
DCTN3 ENSGALG00000021365 22839 dynactin subunit 3 [Source:NCBI gene;Acc:427404]











Genes with expression patterns similar to DCTN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DCTN3 ENSGALG00000021365 22839 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 dynactin subunit 3 [Source:NCBI gene;Acc:427404]
2. AP3B2 2331 1.741 - - - - - - 0.911 - - 0.830 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
3. SRPR SRPR 21067 1.645 - - - - - - 0.901 - - 0.744
4. MORN4 ENSGALG00000006149 7772 1.643 - - - - 0.803 - - - - 0.840 MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
5. CREPT CREPT 17142 1.579 - - - - 0.785 - - - - 0.794
6. ZNF639 ENSGALG00000005944 6387 0.957 - - - - 0.957 - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
7. ZFHX3 ENSGALG00000000713 2340 0.955 - - - - 0.955 - - - - - zinc finger homeobox 3 [Source:NCBI gene;Acc:395682]
8. RAB7A ENSGALG00000005902 28565 0.952 - - - - 0.952 - - - - - RAB7A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9788]
9. NGFR ENSGALG00000035950 13452 0.949 - - - - 0.949 - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
10. UBE2I ENSGALG00000006428 18421 0.946 - - - - 0.946 - - - - - ubiquitin conjugating enzyme E2 I [Source:NCBI gene;Acc:374123]
11. PSMC6 ENSGALG00000012408 52068 0.945 - - - - 0.945 - - - - - proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
12. DUT ENSGALG00000038032 34659 0.942 - - - - 0.942 - - - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
13. ATG5 ENSGALG00000015387 7752 0.93 - - - - - - - 0.930 - - autophagy related 5 [Source:NCBI gene;Acc:421784]
14. PIN4 ENSGALG00000003878 23523 0.929 - - - - - - - 0.929 - - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 [Source:HGNC Symbol;Acc:HGNC:8992]
15. DGCR14 DGCR14 2633 0.912 - - - - - - 0.912 - - -
16. ENSGALG00000023608 ENSGALG00000023608 1538 0.912 - - - - - - 0.912 - - -
17. TXNDC9 ENSGALG00000032090 6804 0.912 - - - - - - - 0.912 - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
18. DNAH17 1389 0.912 - - - - - - 0.912 - - - dynein axonemal heavy chain 17, transcript variant X6
19. ACAT1 ENSGALG00000017163 6239 0.912 - - - - - - 0.912 - - - acetyl-CoA acetyltransferase 1 [Source:NCBI gene;Acc:418968]
20. RWDD2B ENSGALG00000015807 3601 0.912 - - - - - - 0.912 - - - RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
21. CTNNA1 ENSGALG00000002447 22379 0.912 - - - - - - 0.912 - - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
22. GCC1 ENSGALG00000033149 1915 0.912 - - - - - - 0.912 - - - GRIP and coiled-coil domain containing 1 [Source:NCBI gene;Acc:430581]
23. RANBP3 ENSGALG00000000577 8856 0.912 - - - - - - 0.912 - - - RAN binding protein 3 [Source:HGNC Symbol;Acc:HGNC:9850]
24. RALGAPA1 ENSGALG00000010088 6005 0.912 - - - - - - 0.912 - - - Ral GTPase activating protein catalytic alpha subunit 1 [Source:NCBI gene;Acc:423327]
25. CEP19 ENSGALG00000006405 1645 0.912 - - - - - - 0.912 - - - centrosomal protein 19 [Source:NCBI gene;Acc:424858]
26. ZNF385D ENSGALG00000011283 2578 0.912 - - - - - - 0.912 - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
27. HEY1 ENSGALG00000035031 8795 0.912 - - - - - - 0.912 - - - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
28. XRCC3 ENSGALG00000011533 3768 0.912 - - - - - - 0.912 - - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
29. UFSP2 ENSGALG00000010601 5809 0.912 - - - - - - 0.912 - - - UFM1 specific peptidase 2 [Source:NCBI gene;Acc:422542]
30. SSB ENSGALG00000009677 25335 0.911 - - - - - - 0.911 - - - Sjogren syndrome antigen B [Source:NCBI gene;Acc:395268]
31. BCKDHB ENSGALG00000040702 9373 0.911 - - - - - - 0.911 - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:NCBI gene;Acc:395375]
32. MAST4 ENSGALG00000014784 4153 0.911 - - - - - - 0.911 - - - microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
33. SESTD1 ENSGALG00000009031 13090 0.91 - - - - - - 0.910 - - - SEC14 and spectrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18379]
34. FASN ENSGALG00000040896 17372 0.91 - - - - - - 0.910 - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
35. TMEM258 ENSGALG00000038292 31116 0.909 - - - - - - 0.909 - - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
36. RNF11 ENSGALG00000010539 8617 0.909 - - - - - - 0.909 - - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
37. INPP5K ENSGALG00000002739 8120 0.909 - - - - - - 0.909 - - - inositol polyphosphate-5-phosphatase K [Source:NCBI gene;Acc:771549]
38. ENSGALG00000023447 ENSGALG00000023447 17486 0.908 - - - - - - 0.908 - - -
39. COL4A5 ENSGALG00000008141 15874 0.908 - - - - - - 0.908 - - - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
40. PSMD7 ENSGALG00000000707 26350 0.907 - - - - - - 0.907 - - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
41. NUS1 ENSGALG00000014899 13352 0.907 - - - - - - 0.907 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:HGNC Symbol;Acc:HGNC:21042]
42. RNF4 ENSGALG00000015668 15780 0.907 - - - - - - 0.907 - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
43. TPX2 ENSGALG00000006267 26087 0.907 - - - - - - 0.907 - - - TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
44. USMG5 ENSGALG00000034645 33263 0.907 - - - - - - 0.907 - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
45. UFM1 ENSGALG00000017042 15794 0.904 - - - - - - 0.904 - - - ubiquitin fold modifier 1 [Source:NCBI gene;Acc:418894]
46. H3-IX_1 H3-IX_1 54392 0.903 - - - - - - 0.903 - - -
47. MSH2 ENSGALG00000008962 9709 0.901 - - - - - - 0.901 - - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
48. CKS1B ENSGALG00000028664 42261 0.901 - - - - - - 0.901 - - - CDC28 protein kinase regulatory subunit 1B [Source:NCBI gene;Acc:100134845]
49. MRPS21 ENSGALG00000000456 35298 0.897 - - - - - - 0.897 - - - mitochondrial ribosomal protein S21 [Source:NCBI gene;Acc:426666]
50. CFL2 ENSGALG00000010027 16952 0.896 - - - - - - 0.896 - - - cofilin 2 [Source:NCBI gene;Acc:423320]
51. MAPRE1 ENSGALG00000006657 64346 0.894 - - - - - - 0.894 - - - microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
52. CLTA ENSGALG00000015326 26867 0.883 - - - - 0.883 - - - - - clathrin light chain A [Source:NCBI gene;Acc:427284]
53. SON ENSGALG00000035096 8654 0.872 - - - - - - - 0.872 - - SON DNA binding protein, transcript variant X4
54. HNRNPA2B1 ENSGALG00000011036 53662 0.867 - - - - - - 0.867 - - - heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
55. PHF2 ENSGALG00000039208 2003 0.866 - - - - - - - - - 0.866 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
56. ARHGAP11A ENSGALG00000009731 6817 0.864 - - - - - - - - - 0.864 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
57. SYNCRIP ENSGALG00000015830 30555 0.861 - - - - 0.861 - - - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
58. RNF220 ENSGALG00000010109 3114 0.86 - - - - - - - - - 0.860 ring finger protein 220 [Source:NCBI gene;Acc:424580]
59. TRAPPC2L ENSGALG00000006250 21772 0.855 - - - - 0.855 - - - - - trafficking protein particle complex 2 like [Source:HGNC Symbol;Acc:HGNC:30887]
60. GPBP1 ENSGALG00000014724 5454 0.853 - - - - - - - 0.853 - - GC-rich promoter binding protein 1 [Source:HGNC Symbol;Acc:HGNC:29520]
61. SERPINB6 ENSGALG00000012866 1582 0.842 - - - - - - - - - 0.842 serpin family B member 6 [Source:NCBI gene;Acc:420895]
62. TAX1BP3 ENSGALG00000004618 35172 0.84 - - - - 0.840 - - - - - Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
63. PKDCCB ENSGALG00000011166 74 0.84 - - - - - - - - - 0.840 protein kinase domain containing, cytoplasmic b
64. TRIM24 ENSGALG00000012823 2725 0.84 - - - - - - - - - 0.840 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
65. TWF2 ENSGALG00000003977 6597 0.84 - - - - - - - - - 0.840 twinfilin actin binding protein 2 [Source:NCBI gene;Acc:415940]
66. PSMB4 ENSGALG00000000905 46735 0.838 - - - - - - - - - 0.838 proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
67. WWC1 ENSGALG00000001826 4666 0.838 - - - - - - - - - 0.838 WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
68. NBN ENSGALG00000037686 648 0.836 - - - - - - - - - 0.836 nibrin [Source:NCBI gene;Acc:374246]
69. CTCF 10811 0.836 - - - - - - - - - 0.836 CCCTC-binding factor, transcript variant X2
70. ARIH2 ENSGALG00000006956 3692 0.835 - - - - - - - - - 0.835 ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
71. HDAC4 ENSGALG00000004288 2124 0.835 - - - - - - - - - 0.835 histone deacetylase 4 [Source:NCBI gene;Acc:374207]
72. ACOX1 ENSGALG00000002159 2953 0.833 - - - - - - - - - 0.833 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
73. TRIM3 ENSGALG00000034004 110 0.829 - - - - - - - - - 0.829 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
74. FTSJ3 ENSGALG00000032993 8929 0.829 - - - - - - - - - 0.829 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
75. PTPN11 ENSGALG00000004821 2658 0.828 - - - - - - - - - 0.828 protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
76. MAP1B ENSGALG00000014999 6288 0.826 - - - - 0.826 - - - - - microtubule associated protein 1B
77. USP14 ENSGALG00000014920 18778 0.826 - - - - - - - - - 0.826 ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
78. ZNF142 ENSGALG00000011393 2078 0.826 - - - - - - - - - 0.826 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
79. MRPL46 ENSGALG00000006782 5033 0.825 - - - - 0.825 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
80. PKM ENSGALG00000001992 93960 0.825 - - - - 0.825 - - - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
81. TNPO3 ENSGALG00000039420 5178 0.825 - - - - 0.825 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
82. IFNAR2 ENSGALG00000041867 1596 0.824 - - - - - - - - - 0.824 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
83. HTRA3 ENSGALG00000034673 512 0.824 - - - - 0.824 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
84. gga-mir-6584 ENSGALG00000028834 1481 0.823 - - - - 0.823 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
85. MYEOV2 MYEOV2 5155 0.822 - - - - 0.822 - - - - -
86. MTO1 ENSGALG00000015923 4418 0.822 - - - - - - - - - 0.822 mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
87. RAE1 ENSGALG00000007653 8930 0.822 - - - - 0.822 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
88. PPAPDC1B PPAPDC1B 6698 0.822 - - - - 0.822 - - - - -
89. NDST2 ENSGALG00000005107 4224 0.822 - - - - 0.822 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
90. C15H12ORF49 C15H12ORF49 13250 0.822 - - - - 0.822 - - - - -
91. SEC61A2 ENSGALG00000036300 4235 0.821 - - - - 0.821 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
92. VPS8 ENSGALG00000006704 5419 0.821 - - - - 0.821 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
93. TBC1D7 ENSGALG00000012731 4891 0.821 - - - - 0.821 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
94. RNF113A ENSGALG00000000538 3985 0.821 - - - - 0.821 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
95. TCN2 3959 0.82 - - - - - - - - - 0.820 transcobalamin 2
96. SNX30 ENSGALG00000015660 1087 0.82 - - - - - - - - - 0.820 sorting nexin family member 30 [Source:HGNC Symbol;Acc:HGNC:23685]
97. ABCC1 ENSGALG00000006646 2596 0.82 - - - - 0.820 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
98. MED1 ENSGALG00000001708 9556 0.819 - - - - 0.819 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
99. RFWD3 2315 0.819 - - - - - - - - - 0.819 ring finger and WD repeat domain 3
100. PMVK ENSGALG00000046656 645 0.819 - - - - - - - - - 0.819 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]

There are 337 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA