Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DCLRE1B

Gene Name Gene ID Reads Annotation
DCLRE1B ENSGALG00000028626 48 DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]











Genes with expression patterns similar to DCLRE1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DCLRE1B ENSGALG00000028626 48 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
2. OSF-2 OSF-2 10433 1.755 - - - - - - - 0.914 - 0.841
3. BCMO1 BCMO1 35 1.739 - - - - - 0.919 - - - 0.820
4. SAMD3 ENSGALG00000032409 459 1.725 - - - - - - - 0.879 - 0.846 sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
5. VWA3B ENSGALG00000040709 5 1.67 - - - - - 0.919 0.751 - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
6. SST ENSGALG00000007361 1383 1.64 - - - - - - - 0.814 - 0.826 somatostatin [Source:NCBI gene;Acc:396279]
7. RAB38 ENSGALG00000028018 1046 1.599 - - - - - - - 0.852 - 0.747 RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
8. UBE2L6 ENSGALG00000046098 393 1.543 - - - - - - 0.782 - 0.761 - ubiquitin-conjugating enzyme E2L 6, transcript variant X3
9. KANSL1L ENSGALG00000002866 44 1.468 - - - - - 0.717 0.751 - - - KAT8 regulatory NSL complex subunit 1-like, transcript variant X1
10. OTOG ENSGALG00000006208 17 0.947 - - - - - - - 0.947 - - otogelin [Source:HGNC Symbol;Acc:HGNC:8516]
11. TRAF1 ENSGALG00000001583 3 0.919 - - - - - 0.919 - - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
12. SRPX2 ENSGALG00000006796 32 0.919 - - - - - 0.919 - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
13. SHANK2 ENSGALG00000035916 9 0.919 - - - - - 0.919 - - - - SH3 and multiple ankyrin repeat domains 2, transcript variant X10
14. INHBB ENSGALG00000028770 2 0.919 - - - - - 0.919 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
15. CLDN19 ENSGALG00000023580 1 0.919 - - - - - 0.919 - - - - claudin 19 [Source:HGNC Symbol;Acc:HGNC:2040]
16. WNT3 ENSGALG00000001079 8 0.919 - - - - - 0.919 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
17. TMEM181 ENSGALG00000013737 19 0.919 - - - - - 0.919 - - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
18. SMIM10 SMIM10 2 0.919 - - - - - 0.919 - - - -
19. ENSGALG00000024369 ENSGALG00000024369 4 0.919 - - - - - 0.919 - - - -
20. ACPP ENSGALG00000043415 4 0.919 - - - - - 0.919 - - - - acid phosphatase, prostate, transcript variant X2
21. ABI3BP ENSGALG00000015307 4 0.919 - - - - - 0.919 - - - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
22. PEX26 ENSGALG00000019286 1 0.919 - - - - - 0.919 - - - - peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:HGNC:22965]
23. TMEM201 ENSGALG00000002527 2 0.919 - - - - - 0.919 - - - - transmembrane protein 201
24. ENSGALG00000006495 ENSGALG00000006495 4 0.919 - - - - - 0.919 - - - -
25. OLIG3 ENSGALG00000013862 51 0.919 - - - - - 0.919 - - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
26. KCNQ3 ENSGALG00000037626 6 0.919 - - - - - 0.919 - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
27. ENSGALG00000020320 ENSGALG00000020320 1 0.919 - - - - - 0.919 - - - -
28. SLC38A7 ENSGALG00000002313 25 0.919 - - - - - 0.919 - - - - solute carrier family 38 member 7, transcript variant X5
29. BAP1 ENSGALG00000004366 12 0.919 - - - - - 0.919 - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
30. ANKFN1 ENSGALG00000003105 15 0.919 - - - - - 0.919 - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
31. RAB4A ENSGALG00000036218 20 0.919 - - - - - 0.919 - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
32. DPF3 ENSGALG00000009352 7 0.919 - - - - - 0.919 - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
33. ENSGALG00000025912 ENSGALG00000025912 4 0.919 - - - - - 0.919 - - - -
34. ITGAV ENSGALG00000002655 26 0.919 - - - - - 0.919 - - - - integrin subunit alpha V [Source:NCBI gene;Acc:396420]
35. CREB3 ENSGALG00000002523 23 0.919 - - - - - 0.919 - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
36. VTG1 ENSGALG00000039354 17 0.919 - - - - - 0.919 - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
37. RAB3GAP2 ENSGALG00000009503 36 0.913 - - - - - - - - - 0.913 RAB3 GTPase activating non-catalytic protein subunit 2 [Source:NCBI gene;Acc:421343]
38. KCTD8 ENSGALG00000014225 47 0.912 - - - - - 0.912 - - - - potassium channel tetramerization domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22394]
39. Sep-03 Sep-03 109 0.911 - - - - - 0.911 - - - -
40. UNCX ENSGALG00000039292 165 0.907 - - - - - 0.907 - - - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
41. COL11A1 ENSGALG00000005180 244 0.906 - - - - - - - - - 0.906 collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
42. ENSGALG00000013409 ENSGALG00000013409 4 0.903 - - - - - - - - - 0.903
43. UGT2A1 ENSGALG00000011805 2 0.903 - - - - - - - - - 0.903 UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus, transcript variant X3
44. PGR ENSGALG00000017195 2 0.903 - - - - - - - - - 0.903 progesterone receptor [Source:NCBI gene;Acc:396198]
45. ENSGALG00000021386 ENSGALG00000021386 29 0.903 - - - - - - - - - 0.903
46. ENSGALG00000010883 ENSGALG00000010883 10 0.903 - - - - - - - - - 0.903
47. SLC26A5 ENSGALG00000008222 3 0.903 - - - - - - - - - 0.903 solute carrier family 26 member 5 [Source:NCBI gene;Acc:417715]
48. FOLH1 ENSGALG00000017234 9 0.903 - - - - - - - - - 0.903 folate hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3788]
49. ENSGALG00000023012 ENSGALG00000023012 2 0.903 - - - - - - - - - 0.903
50. CNTNAP5 ENSGALG00000011577 2 0.903 - - - - - - - - - 0.903 contactin associated protein like 5 [Source:NCBI gene;Acc:424231]
51. SLC22A15 ENSGALG00000015016 12 0.903 - - - - - - - - - 0.903 solute carrier family 22 member 15 [Source:HGNC Symbol;Acc:HGNC:20301]
52. gga-mir-1556 ENSGALG00000025512 2 0.903 - - - - - - - - - 0.903 gga-mir-1556 [Source:miRBase;Acc:MI0007281]
53. ATXN1 ENSGALG00000012709 2 0.903 - - - - - - - - - 0.903 ataxin 1 [Source:HGNC Symbol;Acc:HGNC:10548]
54. ENSGALG00000008822 ENSGALG00000008822 221 0.902 - - - - - - - - - 0.902
55. SLC6A1 ENSGALG00000004921 118 0.9 - - - - - - - 0.900 - - solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]
56. SCG5 ENSGALG00000009725 10 0.898 - - - - - 0.898 - - - - secretogranin V [Source:NCBI gene;Acc:769742]
57. MAPK10 ENSGALG00000011109 16 0.896 - - - - - 0.896 - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
58. COL9A3 ENSGALG00000005628 2842 0.893 - - - - - - - 0.893 - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
59. STYK1 ENSGALG00000014759 3 0.89 - - - - - 0.890 - - - - serine/threonine/tyrosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:18889]
60. SNORA74 SNORA74 8 0.89 - - - - - 0.890 - - - -
61. FHAD1 ENSGALG00000034761 3 0.888 - - - - - 0.888 - - - - forkhead associated phosphopeptide binding domain 1 [Source:HGNC Symbol;Acc:HGNC:29408]
62. SPON2 ENSGALG00000038433 1240 0.884 - - - - - - - 0.884 - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
63. ENSGALG00000028367 ENSGALG00000028367 102 0.882 - - - - - - - - - 0.882
64. ARHGAP39 ENSGALG00000001536 15 0.882 - - - - - - - - - 0.882 Rho GTPase activating protein 39, transcript variant X2
65. PALM2 ENSGALG00000015655 20 0.881 - - - - - - - - - 0.881 paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]
66. PLXND1 ENSGALG00000008473 21 0.877 - - - - - - - - - 0.877 plexin D1 [Source:HGNC Symbol;Acc:HGNC:9107]
67. PCDH12 ENSGALG00000002544 36 0.877 - - - - - - - 0.877 - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
68. TAC1 ENSGALG00000009737 2211 0.876 - - - - - - - 0.876 - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
69. EXT2 ENSGALG00000031542 58 0.876 - - - - - - 0.876 - - - exostosin glycosyltransferase 2 [Source:NCBI gene;Acc:425859]
70. ITGA6 ENSGALG00000034007 53 0.87 - - - - - 0.870 - - - - integrin subunit alpha 6 [Source:NCBI gene;Acc:396226]
71. PCDH8 ENSGALG00000036258 1945 0.87 - - - - - 0.870 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
72. LAPTM5 ENSGALG00000038636 18 0.869 - - - - - - - - - 0.869 lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
73. CCDC6 ENSGALG00000003165 93 0.868 - - - - - 0.868 - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
74. DPY19L4 ENSGALG00000039222 30 0.865 - - - - - - - - - 0.865 dpy-19 like 4 [Source:HGNC Symbol;Acc:HGNC:27829]
75. ENSGALG00000027568 ENSGALG00000027568 3 0.863 - - - - - - - - - 0.863
76. IRF8 ENSGALG00000005757 5 0.863 - - - - - - - - - 0.863 interferon regulatory factor 8 [Source:NCBI gene;Acc:396385]
77. ENSGALG00000026584 ENSGALG00000026584 77 0.863 - - - - - 0.863 - - - -
78. FNDC1 ENSGALG00000011663 1040 0.863 - - - - - - - 0.863 - - fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]
79. PSEN1 ENSGALG00000009320 15 0.861 - - - - - 0.861 - - - - presenilin 1 [Source:NCBI gene;Acc:373977]
80. LRRC31 ENSGALG00000023616 55 0.859 - - - - - - - - - 0.859 leucine rich repeat containing 31 [Source:HGNC Symbol;Acc:HGNC:26261]
81. GDF10 ENSGALG00000005985 11 0.859 - - - - - 0.859 - - - - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
82. TIMP3 ENSGALG00000028627 8706 0.858 - - - - - - - 0.858 - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
83. CLDN20 ENSGALG00000027634 25 0.856 - - - - - - - - - 0.856 claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
84. TCEANC2 ENSGALG00000010749 162 0.856 - - - - - 0.856 - - - - transcription elongation factor A N-terminal and central domain containing 2 [Source:NCBI gene;Acc:424657]
85. COL8A1 ENSGALG00000015253 2505 0.854 - - - - - - - 0.854 - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
86. MAK ENSGALG00000012770 32 0.852 - - - - - 0.852 - - - - male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]
87. PLCH2 ENSGALG00000001207 7 0.852 - - - - - 0.852 - - - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
88. CXCL13L2 ENSGALG00000010338 370 0.852 - - - - - - - - - 0.852 C-X-C motif chemokine ligand 13-like 2 [Source:NCBI gene;Acc:422510]
89. TCTE1 ENSGALG00000010165 65 0.85 - - - - - 0.850 - - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
90. C9H2ORF82 ENSGALG00000040264 4201 0.85 - - - - - - - 0.850 - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
91. COL9A2 ENSGALG00000027526 4685 0.848 - - - - - - - 0.848 - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
92. PIGM ENSGALG00000010768 41 0.848 - - - - - - - 0.848 - - phosphatidylinositol glycan anchor biosynthesis class M [Source:NCBI gene;Acc:428583]
93. RASGRF2 ENSGALG00000015598 30 0.848 - - - - - - - 0.848 - - Ras protein specific guanine nucleotide releasing factor 2 [Source:HGNC Symbol;Acc:HGNC:9876]
94. C1orf116 ENSGALG00000001091 34 0.845 - - - - - - - - - 0.845 chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:HGNC:28667]
95. RDH11 ENSGALG00000009538 110 0.844 - - - - - - 0.844 - - - retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]
96. OCA2 ENSGALG00000016740 421 0.842 - - - - - - - 0.842 - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
97. VWA3A 6 0.842 - - - - - - - - - 0.842 von Willebrand factor A domain containing 3A, transcript variant X4
98. KCNJ15 ENSGALG00000016055 66 0.839 - - - - - - - - - 0.839 potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
99. S100A9 ENSGALG00000024272 103 0.839 - - - - - - - - - 0.839 S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
100. DACH2 ENSGALG00000006886 426 0.833 - - - - - 0.833 - - - - dachshund family transcription factor 2 [Source:NCBI gene;Acc:395576]

There are 199 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA