Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for DBX1

Gene Name Gene ID Reads Annotation
DBX1 ENSGALG00000003965 1432 developing brain homeobox 1 [Source:NCBI gene;Acc:422976]











Genes with expression patterns similar to DBX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DBX1 ENSGALG00000003965 1432 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 developing brain homeobox 1 [Source:NCBI gene;Acc:422976]
2. PAX-6 PAX-6 2650 3.333 - - 0.895 0.828 0.829 - 0.781 - - -
3. HES6 ENSGALG00000028415 4830 2.489 - - - 0.869 0.731 - - 0.889 - - hes family bHLH transcription factor 6
4. PTPRZ1 ENSGALG00000040114 3410 2.33 - - 0.802 - 0.812 - 0.716 - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
5. DBX2 ENSGALG00000009604 367 1.606 - - - - - 0.765 - - - 0.841 developing brain homeobox 2 [Source:NCBI gene;Acc:417801]
6. FGD4 ENSGALG00000012932 50 1.602 - - 0.755 - - - - 0.847 - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
7. ENSGALG00000027373 ENSGALG00000027373 2129 1.576 - - 0.836 - 0.740 - - - - -
8. CSPG5 ENSGALG00000032184 991 1.544 - - - - 0.706 - 0.838 - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
9. HES5 ENSGALG00000001141 6514 1.497 - - 0.752 - 0.745 - - - - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
10. EVX1 ENSGALG00000037310 1974 1.45 - - 0.731 - - - - - 0.719 - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
11. NFAM1 ENSGALG00000011872 1 1 - - - - - - - 1.000 - - NFAT activating protein with ITAM motif 1, transcript variant X1
12. PLCL1 ENSGALG00000008113 23 1 - - - - - - - 1.000 - - phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]
13. PIT-1 PIT-1 8 1 - - - - - - - 1.000 - -
14. HSD3B7 ENSGALG00000045366 12 1 - - - - - - - 1.000 - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7, transcript variant X2
15. IL4 ENSGALG00000006827 2 1 - - - - - - - 1.000 - - interleukin 4 [Source:NCBI gene;Acc:416330]
16. gga-mir-30d ENSGALG00000018290 9 1 - - - - - - - 1.000 - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
17. PRDM8 ENSGALG00000038372 928 1 - - - - - - - 1.000 - - PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
18. STAM2 ENSGALG00000012513 9 1 - - - - - - - 1.000 - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
19. ADAM33 ENSGALG00000030602 7 1 - - - - - - - 1.000 - - ADAM metallopeptidase domain 33 [Source:NCBI gene;Acc:422948]
20. KCNJ16 ENSGALG00000004373 6 1 - - - - - - - 1.000 - - potassium voltage-gated channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]
21. RALGPS1_1 ENSGALG00000000906 7 1 - - - - - - - 1.000 - - Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851]
22. C14orf159 C14orf159 7 1 - - - - - - - 1.000 - -
23. ICMT ENSGALG00000024053 10 1 - - - - - - - 1.000 - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
24. BDH1B ENSGALG00000006976 9 0.998 - - - - - - - 0.998 - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
25. INSRR ENSGALG00000013253 54 0.998 - - - - - - - 0.998 - - insulin receptor related receptor [Source:HGNC Symbol;Acc:HGNC:6093]
26. PCCA ENSGALG00000016872 103 0.998 - - - - - - - 0.998 - - propionyl-CoA carboxylase subunit alpha [Source:HGNC Symbol;Acc:HGNC:8653]
27. SUPT7L ENSGALG00000010048 8 0.998 - - - - - - - 0.998 - - SPT7 like, STAGA complex gamma subunit [Source:HGNC Symbol;Acc:HGNC:30632]
28. CCDC112 ENSGALG00000045092 38 0.998 - - - - - - - 0.998 - - coiled-coil domain containing 112 [Source:HGNC Symbol;Acc:HGNC:28599]
29. FAM19A1 32 0.991 - - - - - - - 0.991 - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
30. SYNJ2 ENSGALG00000013727 17 0.991 - - - - - - - 0.991 - - synaptojanin 2 [Source:HGNC Symbol;Acc:HGNC:11504]
31. FADD ENSGALG00000007625 142 0.991 - - - - - - - 0.991 - - Fas associated via death domain [Source:HGNC Symbol;Acc:HGNC:3573]
32. PAPPA2 40 0.979 - - - - - - - - - 0.979 pappalysin 2
33. RASGRP3 ENSGALG00000010435 19 0.962 - - - - - - - 0.962 - - RAS guanyl releasing protein 3 [Source:NCBI gene;Acc:421460]
34. SCL SCL 69 0.961 - - - - - - - 0.961 - -
35. GPR97 GPR97 16 0.952 - - - - - - - 0.952 - -
36. RAC3 ENSGALG00000040606 355 0.95 - - - - - - - 0.950 - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
37. AFTPH ENSGALG00000008828 21 0.949 - - - - - - - 0.949 - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
38. ZEB2 ENSGALG00000040465 315 0.943 - - - - - - - 0.943 - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
39. EHD4 ENSGALG00000008950 22 0.943 - - - - - - - 0.943 - - EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
40. IL-12B IL-12B 14 0.943 - - - - - - - 0.943 - -
41. HBE1 ENSGALG00000028273 189 0.943 - - - - - - - 0.943 - - hemoglobin subunit epsilon 1 [Source:NCBI gene;Acc:428114]
42. GALK1 ENSGALG00000002311 13 0.941 - - - - - - - 0.941 - - galactokinase 1 [Source:HGNC Symbol;Acc:HGNC:4118]
43. KEL ENSGALG00000014736 18 0.936 - - - - - - - 0.936 - - Kell blood group, metallo-endopeptidase, transcript variant X4
44. C1S ENSGALG00000014603 80 0.931 - - - - - - - 0.931 - - complement C1s [Source:NCBI gene;Acc:418294]
45. CACNG2 ENSGALG00000031977 196 0.926 - - - - - - - 0.926 - - calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]
46. SOHO-1 ENSGALG00000015599 110 0.922 - - - - - - - - - 0.922 sensory organ homeobox protein SOHo [Source:NCBI gene;Acc:396346]
47. ARMC7 ENSGALG00000007961 217 0.92 - - - - - - - 0.920 - - armadillo repeat containing 7 [Source:NCBI gene;Acc:422118]
48. EPYC ENSGALG00000011269 17 0.92 - - - - - - - 0.920 - - epiphycan [Source:NCBI gene;Acc:417890]
49. CPN2 ENSGALG00000045776 18 0.913 - - - - - - - 0.913 - - carboxypeptidase N subunit 2
50. KL ENSGALG00000017068 21 0.912 - - - - - - - 0.912 - - klotho [Source:HGNC Symbol;Acc:HGNC:6344]
51. CITED2 ENSGALG00000013818 4 0.91 - - - - - - - 0.910 - - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:NCBI gene;Acc:395399]
52. FAM46D 22 0.909 - - - - - - - 0.909 - - family with sequence similarity 46 member D
53. NPY ENSGALG00000010983 441 0.907 - - - 0.907 - - - - - - neuropeptide Y [Source:NCBI gene;Acc:396464]
54. PPP1R17 ENSGALG00000036390 2418 0.901 - - - - - - - - - 0.901 protein phosphatase 1 regulatory subunit 17 [Source:HGNC Symbol;Acc:HGNC:16973]
55. RHOBTB3 ENSGALG00000014675 58 0.897 - - - - - - - 0.897 - - Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
56. OSGIN2 ENSGALG00000042840 83 0.89 - - - - - - - 0.890 - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
57. MYO1C ENSGALG00000002709 57 0.873 - - - - - - - 0.873 - - myosin IC [Source:NCBI gene;Acc:417555]
58. UVRAG ENSGALG00000000845 40 0.867 - - - - - - - 0.867 - - UV radiation resistance associated [Source:NCBI gene;Acc:419091]
59. CENPM ENSGALG00000011914 18 0.867 - - - - - - - 0.867 - - centromere protein M [Source:NCBI gene;Acc:417982]
60. ABI2 ENSGALG00000008714 27 0.865 - - - - - - - 0.865 - - abl interactor 2 [Source:HGNC Symbol;Acc:HGNC:24011]
61. MAP3K3 ENSGALG00000000525 115 0.863 - - - - - - - 0.863 - - mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
62. CEP95 ENSGALG00000003540 475 0.86 - - - - - - - 0.860 - - centrosomal protein 95 [Source:HGNC Symbol;Acc:HGNC:25141]
63. ITGB2 ENSGALG00000007511 46 0.847 - - - - - - - 0.847 - - integrin subunit beta 2 [Source:NCBI gene;Acc:396181]
64. ASS1 ENSGALG00000023689 327 0.843 - - - - - - - - - 0.843 argininosuccinate synthase 1 [Source:NCBI gene;Acc:417185]
65. ENSGALG00000012463 ENSGALG00000012463 242 0.836 - - - - - - - 0.836 - -
66. ENSGALG00000019837 ENSGALG00000019837 211 0.831 - - - - - - - 0.831 - -
67. MUC5B MUC5B 62 0.83 - - - - - - - 0.830 - -
68. ENSGALG00000020972 ENSGALG00000020972 54 0.821 - - - - - 0.821 - - - -
69. DNM3 ENSGALG00000033244 6 0.821 - - - - - 0.821 - - - - dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]
70. TUBA8A ENSGALG00000013056 32 0.821 - - - - - 0.821 - - - - tubulin alpha 8a
71. PRADC1 ENSGALG00000016089 997 0.815 - - - - - - - 0.815 - - protease associated domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16047]
72. ENSGALG00000012382 ENSGALG00000012382 10 0.812 - - - - - - - 0.812 - -
73. RGS3 ENSGALG00000008881 3399 0.812 - - - - - - - - - 0.812 regulator of G protein signaling 3 [Source:NCBI gene;Acc:395110]
74. IRX1 ENSGALG00000030991 1474 0.805 - - - - - - 0.805 - - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
75. RTDR1 RTDR1 104 0.804 - - - - - - 0.804 - - -
76. GALE ENSGALG00000004047 150 0.801 - - - - - - - 0.801 - - UDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]
77. SPHKAP ENSGALG00000002974 80 0.799 - - - - - - 0.799 - - - SPHK1 interactor, AKAP domain containing [Source:NCBI gene;Acc:424789]
78. PIRT 41 0.797 - - - - - - - - - 0.797 phosphoinositide-interacting regulator of transient receptor potential channels
79. CD300A CD300A 173 0.796 - - - - - - - 0.796 - -
80. ENSGALG00000020497 ENSGALG00000020497 446 0.794 - - - - - - - 0.794 - -
81. GABRG2 ENSGALG00000038042 211 0.794 - - - 0.794 - - - - - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
82. PHACTR2 ENSGALG00000013768 44 0.793 - - - - - - - 0.793 - - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
83. ERBB2 ENSGALG00000031529 313 0.792 - - - - - - - 0.792 - - erb-b2 receptor tyrosine kinase 2 [Source:NCBI gene;Acc:426130]
84. OTP ENSGALG00000026744 162 0.792 - - 0.792 - - - - - - - orthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
85. SPARCL1 ENSGALG00000010929 10 0.791 - - - - - - - - - 0.791 SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
86. ATP13A2 ENSGALG00000003774 271 0.791 - - - - - - - 0.791 - - ATPase 13A2 [Source:NCBI gene;Acc:419466]
87. TRAPPC3L ENSGALG00000028539 19 0.791 - - - - - - - - - 0.791 trafficking protein particle complex 3 like [Source:HGNC Symbol;Acc:HGNC:21090]
88. AGL ENSGALG00000005407 93 0.791 - - - - - - - 0.791 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:HGNC:321]
89. ENSGALG00000005511 ENSGALG00000005511 7 0.789 - - 0.789 - - - - - - -
90. HS3ST5 ENSGALG00000026594 44 0.784 - - - - - - - - - 0.784 heparan sulfate-glucosamine 3-sulfotransferase 5 [Source:HGNC Symbol;Acc:HGNC:19419]
91. TMEM159 ENSGALG00000027173 67 0.783 - - - - - - 0.783 - - - transmembrane protein 159 [Source:HGNC Symbol;Acc:HGNC:30136]
92. HS3ST6 ENSGALG00000005413 45 0.781 - - - - - 0.781 - - - - heparan sulfate-glucosamine 3-sulfotransferase 6 [Source:HGNC Symbol;Acc:HGNC:14178]
93. EPB42 ENSGALG00000021230 20 0.781 - - - - - - - 0.781 - - Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. [Source:RefSeq mRNA;Acc:NM_001321559]
94. WSCD2 ENSGALG00000004849 477 0.779 - - 0.779 - - - - - - - WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
95. ENSGALG00000028038 ENSGALG00000028038 9 0.779 - - - - - 0.779 - - - -
96. PROCA1 668 0.777 - - - - 0.777 - - - - - protein interacting with cyclin A1
97. ENSGALG00000023084 ENSGALG00000023084 10 0.773 - - - - - - - 0.773 - -
98. PLAGL1 ENSGALG00000013754 45 0.773 - - - - - 0.773 - - - - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
99. IRX2 ENSGALG00000013193 2170 0.773 - - - - - 0.773 - - - - iroquois homeobox 2 [Source:NCBI gene;Acc:373975]
100. DYRK1A ENSGALG00000016053 345 0.772 - - - - - - - 0.772 - - dual specificity tyrosine phosphorylation regulated kinase 1A [Source:NCBI gene;Acc:395233]

There are 77 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA