Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for DBR1

Gene Name Gene ID Reads Annotation
DBR1 ENSGALG00000043797 1896 debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]











Genes with expression patterns similar to DBR1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. DBR1 ENSGALG00000043797 1896 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
2. KIAA0930 ENSGALG00000014226 1243 1.853 - - 0.915 - - - - 0.938 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
3. B3GNT7 ENSGALG00000007701 929 1.798 - - 0.870 - - - - 0.928 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
4. ENSGALG00000004032 ENSGALG00000004032 2010 1.758 - - 0.825 - - - - 0.933 - -
5. COL6A1 ENSGALG00000005974 1991 1.743 - - 0.889 - - - - 0.854 - - collagen type VI alpha 1 chain [Source:NCBI gene;Acc:396000]
6. ATP2B2 ENSGALG00000030908 584 1.712 - - 0.895 - - - - 0.817 - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
7. FA2H ENSGALG00000002775 396 1.667 - - - - - - 0.776 0.891 - - fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:21197]
8. RASGEF1A ENSGALG00000002525 918 1.666 - - - - - - 0.744 0.922 - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
9. GPX7 ENSGALG00000010633 7224 1.657 - - - - - - 0.720 0.937 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
10. GRAMD1C ENSGALG00000035629 2494 1.647 - - 0.728 - - - - 0.919 - - GRAM domain containing 1C [Source:HGNC Symbol;Acc:HGNC:25252]
11. NXT2 ENSGALG00000008092 2477 1.628 - - 0.715 - - - - 0.913 - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
12. PIH1D3 ENSGALG00000004870 1365 1.596 - - 0.859 - - - 0.737 - - - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
13. AP3M2 ENSGALG00000038155 3372 1.589 - - - - - - 0.721 0.868 - - adaptor related protein complex 3 subunit mu 2 [Source:HGNC Symbol;Acc:HGNC:570]
14. LOC419074 ENSGALG00000017336 1885 1.586 - - 0.801 - - - 0.785 - - - F-box/WD repeat-containing protein 7-like, transcript variant X3
15. AP4E1 2726 1.574 - - - - - - - 0.835 0.739 - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
16. ALDH7A1 ENSGALG00000008229 5891 1.571 - - 0.730 - - - - 0.841 - - aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
17. HDHD3 ENSGALG00000044101 6333 1.568 - - 0.742 - - - - 0.826 - - haloacid dehalogenase like hydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28171]
18. ZNF618 ENSGALG00000008886 1326 1.567 - - - - - - 0.768 - 0.799 - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
19. PHIP ENSGALG00000015889 2348 1.552 - - 0.798 - - - 0.754 - - - pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
20. ENSGALG00000026628 ENSGALG00000026628 1395 1.546 - - 0.831 - - - 0.715 - - -
21. BTAF1 ENSGALG00000030598 3556 1.542 - - 0.736 - - - - 0.806 - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
22. CCT7 ENSGALG00000016088 2824 1.534 - - 0.813 - - - 0.721 - - - chaperonin containing TCP1 subunit 7 [Source:NCBI gene;Acc:428806]
23. KANK1 ENSGALG00000010158 3780 1.531 - - 0.704 - - - - 0.827 - - KN motif and ankyrin repeat domains 1 [Source:NCBI gene;Acc:395475]
24. INPP5F ENSGALG00000009445 1911 1.524 - - 0.789 - - - 0.735 - - - inositol polyphosphate-5-phosphatase F [Source:HGNC Symbol;Acc:HGNC:17054]
25. DBI ENSGALG00000012112 6910 1.519 - - 0.733 - - - 0.786 - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
26. SALL4 ENSGALG00000041365 6760 1.513 - - 0.746 - - - - 0.767 - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
27. TCEANC ENSGALG00000016581 948 0.957 - - - - - - - 0.957 - - transcription elongation factor A N-terminal and central domain containing [Source:HGNC Symbol;Acc:HGNC:28277]
28. CCDC51 ENSGALG00000006465 1845 0.957 - - - - - - - 0.957 - - coiled-coil domain containing 51, transcript variant X1
29. CENPC1 CENPC1 3324 0.956 - - - - - - - 0.956 - -
30. C4BPA ENSGALG00000001175 4278 0.954 - - - - - - - 0.954 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
31. PYGL ENSGALG00000012365 4691 0.952 - - - - - - - 0.952 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
32. SOX5 ENSGALG00000032768 998 0.95 - - - - - - - 0.950 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
33. ECI2 ENSGALG00000012809 3692 0.947 - - - - - - - 0.947 - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
34. GADD45 GADD45 8780 0.947 - - - - - - - 0.947 - -
35. TES ENSGALG00000031934 5908 0.946 - - - - - - - 0.946 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
36. SNX2 ENSGALG00000005337 590 0.945 - - 0.945 - - - - - - - sorting nexin 2 [Source:NCBI gene;Acc:426797]
37. TFG ENSGALG00000015299 849 0.945 - - - - - - - 0.945 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
38. SLC41A1 ENSGALG00000000721 1604 0.945 - - - - - - - 0.945 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
39. SEC11C ENSGALG00000031663 4266 0.944 - - - - - - - 0.944 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
40. DNAJC11 ENSGALG00000000627 769 0.943 - - - - - - - 0.943 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
41. CHALK5 CHALK5 1351 0.943 - - - - - - - 0.943 - -
42. NRG4 ENSGALG00000002952 1440 0.941 - - - - - - - 0.941 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
43. EX-FABP EX-FABP 516 0.94 - - - - - - - 0.940 - -
44. RIN3 ENSGALG00000010806 729 0.94 - - - - - - - 0.940 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
45. ARAP2 ENSGALG00000041373 233 0.94 - - - - - - - 0.940 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
46. YARS2 503 0.94 - - - - - - - 0.940 - - tyrosyl-tRNA synthetase 2
47. ORAI1 ENSGALG00000004240 515 0.938 - - - - - - - 0.938 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
48. AMER1 ENSGALG00000007599 994 0.938 - - - - - - - 0.938 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
49. DSG2 ENSGALG00000015142 67 0.937 - - - - - - - 0.937 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
50. TRIM62 ENSGALG00000028437 5124 0.937 - - - - - - - 0.937 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
51. CHUK ENSGALG00000003289 5698 0.937 - - - - - - - 0.937 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
52. NIT1 ENSGALG00000007585 1256 0.937 - - - - - - - 0.937 - - nitrilase 1 [Source:HGNC Symbol;Acc:HGNC:7828]
53. STK17B ENSGALG00000007924 519 0.937 - - - - - - - 0.937 - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
54. LIPG ENSGALG00000043734 2490 0.936 - - - - - - - 0.936 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
55. HSPA13 ENSGALG00000019201 712 0.936 - - - - - - - 0.936 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
56. ZBTB26 ENSGALG00000042762 1920 0.936 - - - - - - - 0.936 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
57. SEMA3E ENSGALG00000038225 677 0.936 - - - - - - - 0.936 - - semaphorin 3E [Source:NCBI gene;Acc:374089]
58. II II 929 0.936 - - - - - - - 0.936 - -
59. CASP7 ENSGALG00000008933 506 0.936 - - - - - - - 0.936 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
60. LAMP2 ENSGALG00000008572 198 0.935 - - - - - - - 0.935 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
61. ENSGALG00000001854 ENSGALG00000001854 965 0.934 - - - - - - - 0.934 - -
62. TMEM200C ENSGALG00000030210 1434 0.934 - - 0.934 - - - - - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
63. MDM4 ENSGALG00000000636 91 0.933 - - - - - - - 0.933 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
64. ENSGALG00000006569 ENSGALG00000006569 2169 0.933 - - - - - - - 0.933 - -
65. FUBP1 ENSGALG00000008939 2850 0.933 - - - - - - - 0.933 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
66. LRRC45 ENSGALG00000002877 1751 0.933 - - - - - - - 0.933 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
67. TRMT61B ENSGALG00000008979 615 0.933 - - - - - - - 0.933 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
68. ABCB10 ENSGALG00000011096 1407 0.932 - - - - - - - 0.932 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
69. SLC30A2 ENSGALG00000010375 44 0.932 - - - - - - - 0.932 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
70. GAA ENSGALG00000038853 158 0.932 - - - - - - - 0.932 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
71. VPS37A ENSGALG00000013646 55 0.932 - - - - - - - 0.932 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
72. CWH43 ENSGALG00000041921 68 0.932 - - - - - - - 0.932 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
73. TMEM200A ENSGALG00000002282 77 0.932 - - - - - - - 0.932 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
74. WBSCR17 581 0.931 - - 0.931 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
75. TRAM2 ENSGALG00000016673 438 0.93 - - - - - - - 0.930 - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
76. PRPSAP1 ENSGALG00000021539 3517 0.93 - - - - - - - 0.930 - - phosphoribosyl pyrophosphate synthetase associated protein 1 [Source:HGNC Symbol;Acc:HGNC:9466]
77. PHLPP2 ENSGALG00000000875 561 0.93 - - - - - - - 0.930 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
78. LOC422106 ENSGALG00000019757 453 0.927 - - - - - - - 0.927 - - uncharacterized LOC422106
79. HSDL1 ENSGALG00000003273 1108 0.927 - - - - - - - 0.927 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
80. ANXA6 ENSGALG00000004357 2891 0.926 - - - - - - - 0.926 - - annexin A6 [Source:NCBI gene;Acc:395481]
81. PAMR1 ENSGALG00000007886 928 0.926 - - - - - - - 0.926 - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
82. MRC1 ENSGALG00000008629 259 0.926 - - - - - - - 0.926 - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
83. SENP5 ENSGALG00000008545 909 0.926 - - - - - - - 0.926 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
84. C5H14ORF166 C5H14ORF166 24176 0.925 - - 0.925 - - - - - - -
85. TRIM71 ENSGALG00000019622 1633 0.924 - - - - - - - 0.924 - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
86. SLC25A48 ENSGALG00000006341 2606 0.924 - - - - - - - 0.924 - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
87. TSEN2 ENSGALG00000004981 1929 0.924 - - 0.924 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
88. FAM217B ENSGALG00000026542 2066 0.923 - - - - - - - 0.923 - - family with sequence similarity 217 member B [Source:HGNC Symbol;Acc:HGNC:16170]
89. LGALS3 ENSGALG00000012173 3306 0.923 - - 0.923 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
90. HDAC4 ENSGALG00000004288 2124 0.922 - - - - - - - 0.922 - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
91. UBA7 ENSGALG00000036263 2918 0.922 - - - - - - - 0.922 - - ubiquitin-like modifier activating enzyme 7
92. ENSGALG00000016572 ENSGALG00000016572 79 0.921 - - - - - - - 0.921 - -
93. ITPR1 ENSGALG00000008294 1226 0.921 - - 0.921 - - - - - - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
94. DLG3 ENSGALG00000041900 3016 0.921 - - 0.921 - - - - - - - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
95. GRIK3 ENSGALG00000002098 111 0.92 - - 0.920 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
96. MT1 MT1 218 0.919 - - 0.919 - - - - - - -
97. H4-I H4-I 2327 0.919 - - - - - - - 0.919 - -
98. RHOC ENSGALG00000001569 53 0.919 - - 0.919 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
99. POMC ENSGALG00000016600 99 0.918 - - 0.918 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
100. LDHA ENSGALG00000006300 4796 0.918 - - - - - - - 0.918 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]

There are 651 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA