Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Cx3cr1

Gene Name Gene ID Reads Annotation
Cx3cr1 ENSMUSG00000052336 187 chemokine (C-X3-C motif) receptor 1 [Source:MGI Symbol;Acc:MGI:1333815]







Genes with expression patterns similar to Cx3cr1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cx3cr1 ENSMUSG00000052336 187 6 1.000 1.000 1.000 1.000 1.000 1.000 chemokine (C-X3-C motif) receptor 1 [Source:MGI Symbol;Acc:MGI:1333815]
2. G730003C15Rik ENSMUSG00000097573 161 0.888 - - - - 0.888 - RIKEN cDNA G730003C15 gene [Source:MGI Symbol;Acc:MGI:3641700]
3. Abca3 ENSMUSG00000024130 102 0.884 - - - - 0.884 - ATP-binding cassette, sub-family A (ABC1), member 3 [Source:MGI Symbol;Acc:MGI:1351617]
4. Rpl31-ps14 ENSMUSG00000094191 94 0.88 - - - - 0.880 - ribosomal protein L31, pseudogene 14 [Source:MGI Symbol;Acc:MGI:3704189]
5. Itpka ENSMUSG00000027296 30 0.878 - - - - 0.878 - inositol 1,4,5-trisphosphate 3-kinase A [Source:MGI Symbol;Acc:MGI:1333822]
6. Gm10517 ENSMUSG00000073482 17 0.875 - - - - 0.875 - predicted gene 10517 [Source:MGI Symbol;Acc:MGI:3642267]
7. 4833424O15Rik 4833424O15Rik 36 0.875 - - - - 0.875 -
8. Gm14738 Gm14738 21 0.874 - - - - 0.874 -
9. Pde6c ENSMUSG00000024992 28 0.873 - - - - 0.873 - phosphodiesterase 6C, cGMP specific, cone, alpha prime [Source:MGI Symbol;Acc:MGI:105956]
10. Gm11903 ENSMUSG00000082573 14 0.873 - - - - 0.873 - predicted gene 11903 [Source:MGI Symbol;Acc:MGI:3651055]
11. Gm20946 ENSMUSG00000110699 9 0.872 - - - - 0.872 - predicted gene, 20946 [Source:MGI Symbol;Acc:MGI:5434301]
12. Atp8b1 ENSMUSG00000039529 18 0.872 - - - - 0.872 - ATPase, class I, type 8B, member 1 [Source:MGI Symbol;Acc:MGI:1859665]
13. Pak6 ENSMUSG00000074923 22 0.872 - - - - 0.872 - p21 (RAC1) activated kinase 6 [Source:MGI Symbol;Acc:MGI:2679420]
14. Amdhd1 ENSMUSG00000015890 30 0.871 - - - - 0.871 - amidohydrolase domain containing 1 [Source:MGI Symbol;Acc:MGI:1919011]
15. Fxyd5 ENSMUSG00000009687 116 0.871 - - - - 0.871 - FXYD domain-containing ion transport regulator 5 [Source:MGI Symbol;Acc:MGI:1201785]
16. Atp8b3 ENSMUSG00000003341 23 0.869 - - - - 0.869 - ATPase, class I, type 8B, member 3 [Source:MGI Symbol;Acc:MGI:1914581]
17. Magee2 ENSMUSG00000031224 46 0.869 - - - - 0.869 - melanoma antigen, family E, 2 [Source:MGI Symbol;Acc:MGI:2148316]
18. Dnah2 ENSMUSG00000005237 21 0.868 - - - - 0.868 - dynein, axonemal, heavy chain 2 [Source:MGI Symbol;Acc:MGI:107731]
19. Tfcp2l1 ENSMUSG00000026380 120 0.865 - - - - 0.865 - transcription factor CP2-like 1 [Source:MGI Symbol;Acc:MGI:2444691]
20. Dio3os ENSMUSG00000113581 22 0.864 - - - - 0.864 - deiodinase, iodothyronine type III, opposite strand [Source:MGI Symbol;Acc:MGI:2664395]
21. AA986860 ENSMUSG00000042510 48 0.861 - - - - 0.861 - expressed sequence AA986860 [Source:MGI Symbol;Acc:MGI:2138143]
22. 1110046J04Rik ENSMUSG00000085457 36 0.861 - - - - 0.861 - RIKEN cDNA 1110046J04 gene [Source:MGI Symbol;Acc:MGI:1916058]
23. Nxph2 ENSMUSG00000069132 17 0.861 - - - - 0.861 - neurexophilin 2 [Source:MGI Symbol;Acc:MGI:107491]
24. 5730480H06Rik ENSMUSG00000029089 98 0.861 - - - - 0.861 - RIKEN cDNA 5730480H06 gene [Source:MGI Symbol;Acc:MGI:1917842]
25. Irf7 ENSMUSG00000025498 11 0.86 - - - - 0.860 - interferon regulatory factor 7 [Source:MGI Symbol;Acc:MGI:1859212]
26. A830018L16Rik ENSMUSG00000057715 111 0.854 - - - - 0.854 - RIKEN cDNA A830018L16 gene [Source:MGI Symbol;Acc:MGI:2444149]
27. Fcgr3 ENSMUSG00000059498 75 0.853 - - - - 0.853 - Fc receptor, IgG, low affinity III [Source:MGI Symbol;Acc:MGI:95500]
28. Pgam5 ENSMUSG00000029500 70 0.851 - - - - 0.851 - phosphoglycerate mutase family member 5 [Source:MGI Symbol;Acc:MGI:1919792]
29. D030068K23Rik ENSMUSG00000097393 202 0.851 - - - - 0.851 - RIKEN cDNA D030068K23 gene [Source:MGI Symbol;Acc:MGI:3037424]
30. Emilin3 ENSMUSG00000050700 51 0.849 - - - - 0.849 - elastin microfibril interfacer 3 [Source:MGI Symbol;Acc:MGI:2389142]
31. Itga10 ENSMUSG00000090210 51 0.848 - - - - 0.848 - integrin, alpha 10 [Source:MGI Symbol;Acc:MGI:2153482]
32. Nkrf ENSMUSG00000044149 445 0.846 - - - - 0.846 - NF-kappaB repressing factor [Source:MGI Symbol;Acc:MGI:1924536]
33. 1700123M08Rik ENSMUSG00000085614 68 0.845 - - - - 0.845 - RIKEN cDNA 1700123M08 gene [Source:MGI Symbol;Acc:MGI:1923915]
34. Lrrc47 ENSMUSG00000029028 97 0.841 - - - - 0.841 - leucine rich repeat containing 47 [Source:MGI Symbol;Acc:MGI:1920196]
35. Gan ENSMUSG00000052557 227 0.84 - - - - 0.840 - giant axonal neuropathy [Source:MGI Symbol;Acc:MGI:1890619]
36. C630043F03Rik ENSMUSG00000084910 143 0.839 - - - - 0.839 - RIKEN cDNA C630043F03 gene [Source:MGI Symbol;Acc:MGI:1915535]
37. Cdca7l ENSMUSG00000021175 640 0.828 - - - - 0.828 - cell division cycle associated 7 like [Source:MGI Symbol;Acc:MGI:2384982]
38. Dyrk2 ENSMUSG00000028630 251 0.825 - - - - 0.825 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:MGI Symbol;Acc:MGI:1330301]
39. Gm19705 ENSMUSG00000097113 65 0.821 - - - - 0.821 - predicted gene, 19705 [Source:MGI Symbol;Acc:MGI:5011890]
40. Ms4a6b ENSMUSG00000024677 67 0.82 - - - - 0.820 - membrane-spanning 4-domains, subfamily A, member 6B [Source:MGI Symbol;Acc:MGI:1917024]
41. Fes ENSMUSG00000053158 106 0.818 - - - - 0.818 - feline sarcoma oncogene [Source:MGI Symbol;Acc:MGI:95514]
42. Hist1h2bn ENSMUSG00000095217 46 0.817 - - - - 0.817 - histone cluster 1, H2bn [Source:MGI Symbol;Acc:MGI:2448407]
43. Wfs1 ENSMUSG00000039474 322 0.816 - - - - 0.816 - wolframin ER transmembrane glycoprotein [Source:MGI Symbol;Acc:MGI:1328355]
44. Jrkl ENSMUSG00000079083 228 0.813 - - - - 0.813 - Jrk-like [Source:MGI Symbol;Acc:MGI:1924782]
45. Mob2 ENSMUSG00000025147 932 0.811 - - - - 0.811 - MOB kinase activator 2 [Source:MGI Symbol;Acc:MGI:1919891]
46. Gm15903 ENSMUSG00000086916 253 0.81 - - - - 0.810 - predicted gene 15903 [Source:MGI Symbol;Acc:MGI:3802037]
47. Gm15464 ENSMUSG00000082609 96 0.81 - - - - 0.810 - predicted gene 15464 [Source:MGI Symbol;Acc:MGI:3646025]
48. Helb ENSMUSG00000020228 171 0.808 - - - - 0.808 - helicase (DNA) B [Source:MGI Symbol;Acc:MGI:2152895]
49. Idi1 ENSMUSG00000058258 1671 0.801 - - - - 0.801 - isopentenyl-diphosphate delta isomerase [Source:MGI Symbol;Acc:MGI:2442264]
50. Acaa1a ENSMUSG00000036138 561 0.798 - - - - 0.798 - acetyl-Coenzyme A acyltransferase 1A [Source:MGI Symbol;Acc:MGI:2148491]
51. Plekha7 ENSMUSG00000045659 771 0.797 - - - - 0.797 - pleckstrin homology domain containing, family A member 7 [Source:MGI Symbol;Acc:MGI:2445094]
52. Gsg2 302 0.796 - - - - 0.796 - germ cell-specific gene 2
53. Thbs3 ENSMUSG00000028047 150 0.796 - - - - 0.796 - thrombospondin 3 [Source:MGI Symbol;Acc:MGI:98739]
54. Zhx2 ENSMUSG00000071757 132 0.795 - - - - 0.795 - zinc fingers and homeoboxes 2 [Source:MGI Symbol;Acc:MGI:2683087]
55. Arhgap27 ENSMUSG00000034255 204 0.792 - - - - 0.792 - Rho GTPase activating protein 27 [Source:MGI Symbol;Acc:MGI:1916903]
56. Soga1 ENSMUSG00000055485 382 0.792 - - - - 0.792 - suppressor of glucose, autophagy associated 1 [Source:MGI Symbol;Acc:MGI:2444575]
57. 4930513N10Rik ENSMUSG00000074136 212 0.791 - - - - 0.791 - RIKEN cDNA 4930513N10 gene [Source:MGI Symbol;Acc:MGI:2443064]
58. Slc46a1 ENSMUSG00000020829 241 0.787 - - - - 0.787 - solute carrier family 46, member 1 [Source:MGI Symbol;Acc:MGI:1098733]
59. Orai2 ENSMUSG00000039747 171 0.786 - - - - 0.786 - ORAI calcium release-activated calcium modulator 2 [Source:MGI Symbol;Acc:MGI:2443195]
60. Naglu ENSMUSG00000001751 142 0.785 - - - - 0.785 - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) [Source:MGI Symbol;Acc:MGI:1351641]
61. Snap29 ENSMUSG00000022765 422 0.784 - - - - 0.784 - synaptosomal-associated protein 29 [Source:MGI Symbol;Acc:MGI:1914724]
62. Rbm46 ENSMUSG00000033882 99 0.784 - - - - 0.784 - RNA binding motif protein 46 [Source:MGI Symbol;Acc:MGI:3645057]
63. Gm10704 ENSMUSG00000074479 74 0.784 - - - - 0.784 - predicted pseudogene 10704 [Source:MGI Symbol;Acc:MGI:3642446]
64. Myocd ENSMUSG00000020542 95 0.782 - - - - 0.782 - myocardin [Source:MGI Symbol;Acc:MGI:2137495]
65. Gimap4 ENSMUSG00000054435 237 0.782 - - - - 0.782 - GTPase, IMAP family member 4 [Source:MGI Symbol;Acc:MGI:1349656]
66. Tfpi ENSMUSG00000027082 1717 0.78 - - - - 0.780 - tissue factor pathway inhibitor [Source:MGI Symbol;Acc:MGI:1095418]
67. Lad1 ENSMUSG00000041782 339 0.779 - - - - 0.779 - ladinin [Source:MGI Symbol;Acc:MGI:109343]
68. Stard9 ENSMUSG00000033705 470 0.778 - - - - 0.778 - START domain containing 9 [Source:MGI Symbol;Acc:MGI:3045258]
69. Dok2 ENSMUSG00000022102 193 0.778 0.778 - - - - - docking protein 2 [Source:MGI Symbol;Acc:MGI:1332623]
70. Trpc2 ENSMUSG00000100254 1435 0.777 - - - - 0.777 - transient receptor potential cation channel, subfamily C, member 2 [Source:MGI Symbol;Acc:MGI:109527]
71. Rnf113a1 ENSMUSG00000036537 199 0.775 - - - - 0.775 - ring finger protein 113A1 [Source:MGI Symbol;Acc:MGI:1917192]
72. Gm14127 ENSMUSG00000082740 101 0.774 - - - - 0.774 - predicted gene 14127 [Source:MGI Symbol;Acc:MGI:3652004]
73. Mir22hg ENSMUSG00000085148 94 0.773 - - - - 0.773 - Mir22 host gene (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914348]
74. Rsad1 ENSMUSG00000039096 252 0.773 - - - - 0.773 - radical S-adenosyl methionine domain containing 1 [Source:MGI Symbol;Acc:MGI:3039628]
75. Zc3h12c ENSMUSG00000035164 253 0.769 - - - - 0.769 - zinc finger CCCH type containing 12C [Source:MGI Symbol;Acc:MGI:3026959]
76. Gm16177 ENSMUSG00000082484 135 0.765 - - - - 0.765 - predicted gene 16177 [Source:MGI Symbol;Acc:MGI:3801751]
77. Aldh1a1 ENSMUSG00000053279 80 0.765 - - - - 0.765 - aldehyde dehydrogenase family 1, subfamily A1 [Source:MGI Symbol;Acc:MGI:1353450]
78. Plekhg1 ENSMUSG00000040624 277 0.763 - - - - 0.763 - pleckstrin homology domain containing, family G (with RhoGef domain) member 1 [Source:MGI Symbol;Acc:MGI:2676551]
79. Strn ENSMUSG00000024077 1056 0.763 - - - - 0.763 - striatin, calmodulin binding protein [Source:MGI Symbol;Acc:MGI:1333757]
80. Egfl6 ENSMUSG00000000402 137 0.76 - - - - 0.760 - EGF-like-domain, multiple 6 [Source:MGI Symbol;Acc:MGI:1858599]
81. Gm13422 ENSMUSG00000084098 313 0.76 - - - - 0.760 - predicted gene 13422 [Source:MGI Symbol;Acc:MGI:3650167]
82. Klhl8 ENSMUSG00000029312 278 0.759 - - - - 0.759 - kelch-like 8 [Source:MGI Symbol;Acc:MGI:2179430]
83. Swsap1 ENSMUSG00000051238 206 0.758 - - - - 0.758 - SWIM type zinc finger 7 associated protein 1 [Source:MGI Symbol;Acc:MGI:1914212]
84. Gm26982 ENSMUSG00000097994 267 0.755 - - - - 0.755 - predicted gene, 26982 [Source:MGI Symbol;Acc:MGI:5504097]
85. Lrrc3 ENSMUSG00000051652 190 0.754 - - - - 0.754 - leucine rich repeat containing 3 [Source:MGI Symbol;Acc:MGI:2447899]
86. Rps15a-ps7 ENSMUSG00000081087 411 0.753 - - - - 0.753 - ribosomal protein S15A, pseudogene 7 [Source:MGI Symbol;Acc:MGI:3650538]
87. Atg4d ENSMUSG00000002820 31 0.753 - - - - 0.753 - autophagy related 4D, cysteine peptidase [Source:MGI Symbol;Acc:MGI:2444308]
88. Vps13c ENSMUSG00000035284 230 0.752 - - - - 0.752 - vacuolar protein sorting 13C [Source:MGI Symbol;Acc:MGI:2444207]
89. Nek3 ENSMUSG00000031478 263 0.748 - - - - 0.748 - NIMA (never in mitosis gene a)-related expressed kinase 3 [Source:MGI Symbol;Acc:MGI:1344371]
90. Hcn3 ENSMUSG00000028051 170 0.747 - - - - 0.747 - hyperpolarization-activated, cyclic nucleotide-gated K+ 3 [Source:MGI Symbol;Acc:MGI:1298211]
91. Tmem161a ENSMUSG00000002342 1120 0.746 - - - - 0.746 - transmembrane protein 161A [Source:MGI Symbol;Acc:MGI:2384577]
92. Gm3739 ENSMUSG00000091472 221 0.746 - - - - 0.746 - predicted gene 3739 [Source:MGI Symbol;Acc:MGI:3781914]
93. Ints8 ENSMUSG00000040738 264 0.744 - - - - 0.744 - integrator complex subunit 8 [Source:MGI Symbol;Acc:MGI:1919906]
94. Smad2 ENSMUSG00000024563 1004 0.744 - - - - 0.744 - SMAD family member 2 [Source:MGI Symbol;Acc:MGI:108051]
95. 3110062M04Rik 233 0.743 - - - - 0.743 - RIKEN cDNA 3110062M04 gene, transcript variant X1
96. Nrros ENSMUSG00000052384 234 0.743 - - - - 0.743 - negative regulator of reactive oxygen species [Source:MGI Symbol;Acc:MGI:2445095]
97. Eif2ak4 ENSMUSG00000005102 763 0.742 - - - - 0.742 - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:MGI Symbol;Acc:MGI:1353427]
98. Ccdc66 ENSMUSG00000046753 404 0.741 - - - - 0.741 - coiled-coil domain containing 66 [Source:MGI Symbol;Acc:MGI:2443639]
99. Zfp646 ENSMUSG00000049739 203 0.74 - - - - 0.740 - zinc finger protein 646 [Source:MGI Symbol;Acc:MGI:3665412]
100. Kcnq1 ENSMUSG00000009545 68 0.738 0.738 - - - - - potassium voltage-gated channel, subfamily Q, member 1 [Source:MGI Symbol;Acc:MGI:108083]

There are 33 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA