Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ctsd

Gene Name Gene ID Reads Annotation
Ctsd ENSMUSG00000007891 898 cathepsin D [Source:MGI Symbol;Acc:MGI:88562]







Genes with expression patterns similar to Ctsd

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ctsd ENSMUSG00000007891 898 6 1.000 1.000 1.000 1.000 1.000 1.000 cathepsin D [Source:MGI Symbol;Acc:MGI:88562]
2. Lrp5 ENSMUSG00000024913 277 0.962 - 0.962 - - - - low density lipoprotein receptor-related protein 5 [Source:MGI Symbol;Acc:MGI:1278315]
3. Rnf217 ENSMUSG00000063760 460 0.96 - 0.960 - - - - ring finger protein 217 [Source:MGI Symbol;Acc:MGI:3610311]
4. Hist1h3a ENSMUSG00000069265 213 0.96 - 0.960 - - - - histone cluster 1, H3a [Source:MGI Symbol;Acc:MGI:2668828]
5. Asb6 ENSMUSG00000039483 591 0.955 - 0.955 - - - - ankyrin repeat and SOCS box-containing 6 [Source:MGI Symbol;Acc:MGI:1919573]
6. Phpt1 ENSMUSG00000036504 2457 0.954 - 0.954 - - - - phosphohistidine phosphatase 1 [Source:MGI Symbol;Acc:MGI:1922704]
7. Kcnip3 ENSMUSG00000079056 249 0.953 - 0.953 - - - - Kv channel interacting protein 3, calsenilin [Source:MGI Symbol;Acc:MGI:1929258]
8. Arhgef3 ENSMUSG00000021895 224 0.952 - 0.952 - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:MGI Symbol;Acc:MGI:1918954]
9. B3gnt7 ENSMUSG00000079445 259 0.951 - 0.951 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:MGI Symbol;Acc:MGI:2384394]
10. Ltf ENSMUSG00000032496 44 0.95 - 0.950 - - - - lactotransferrin [Source:MGI Symbol;Acc:MGI:96837]
11. Gm26617 ENSMUSG00000097340 62 0.95 - 0.950 - - - - predicted gene, 26617 [Source:MGI Symbol;Acc:MGI:5477111]
12. Tradd ENSMUSG00000031887 165 0.948 - 0.948 - - - - TNFRSF1A-associated via death domain [Source:MGI Symbol;Acc:MGI:109200]
13. Polm ENSMUSG00000020474 386 0.948 - 0.948 - - - - polymerase (DNA directed), mu [Source:MGI Symbol;Acc:MGI:1860191]
14. Gabra1 ENSMUSG00000010803 177 0.947 - 0.947 - - - - gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 [Source:MGI Symbol;Acc:MGI:95613]
15. Mocs1 ENSMUSG00000064120 232 0.946 - 0.946 - - - - molybdenum cofactor synthesis 1 [Source:MGI Symbol;Acc:MGI:1928904]
16. 1110032A03Rik ENSMUSG00000037971 578 0.946 - 0.946 - - - - RIKEN cDNA 1110032A03 gene [Source:MGI Symbol;Acc:MGI:1915971]
17. Itsn2 ENSMUSG00000020640 395 0.946 - 0.946 - - - - intersectin 2 [Source:MGI Symbol;Acc:MGI:1338049]
18. Mbnl2 ENSMUSG00000022139 3296 0.946 - 0.946 - - - - muscleblind like splicing factor 2 [Source:MGI Symbol;Acc:MGI:2145597]
19. Wwp1 ENSMUSG00000041058 1490 0.946 - 0.946 - - - - WW domain containing E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:1861728]
20. Cdk5rap1 ENSMUSG00000027487 333 0.945 - 0.945 - - - - CDK5 regulatory subunit associated protein 1 [Source:MGI Symbol;Acc:MGI:1914221]
21. Tcf7 ENSMUSG00000000782 407 0.945 - 0.945 - - - - transcription factor 7, T cell specific [Source:MGI Symbol;Acc:MGI:98507]
22. Wdr33 ENSMUSG00000024400 1573 0.944 - 0.944 - - - - WD repeat domain 33 [Source:MGI Symbol;Acc:MGI:1921570]
23. Kctd9 ENSMUSG00000034327 450 0.944 - 0.944 - - - - potassium channel tetramerisation domain containing 9 [Source:MGI Symbol;Acc:MGI:2145579]
24. Gm26799 ENSMUSG00000097579 157 0.943 - 0.943 - - - - predicted gene, 26799 [Source:MGI Symbol;Acc:MGI:5477293]
25. Slco5a1 ENSMUSG00000025938 586 0.943 - 0.943 - - - - solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
26. Fanca ENSMUSG00000032815 322 0.943 - 0.943 - - - - Fanconi anemia, complementation group A [Source:MGI Symbol;Acc:MGI:1341823]
27. Acss1 ENSMUSG00000027452 285 0.943 - 0.943 - - - - acyl-CoA synthetase short-chain family member 1 [Source:MGI Symbol;Acc:MGI:1915988]
28. Rbm3 ENSMUSG00000031167 840 0.942 - 0.942 - - - - RNA binding motif (RNP1, RRM) protein 3 [Source:MGI Symbol;Acc:MGI:1099460]
29. Cyp20a1 ENSMUSG00000049439 1294 0.942 - 0.942 - - - - cytochrome P450, family 20, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1925201]
30. Sfxn2 ENSMUSG00000025036 1352 0.941 - 0.941 - - - - sideroflexin 2 [Source:MGI Symbol;Acc:MGI:2137678]
31. Xrcc6bp1 389 0.941 - 0.941 - - - - XRCC6 binding protein 1, transcript variant X3
32. Zfp654 ENSMUSG00000047141 509 0.94 - 0.940 - - - - zinc finger protein 654 [Source:MGI Symbol;Acc:MGI:1919270]
33. Arl13b ENSMUSG00000022911 824 0.94 - 0.940 - - - - ADP-ribosylation factor-like 13B [Source:MGI Symbol;Acc:MGI:1915396]
34. 9230110C19Rik 238 0.94 - 0.940 - - - - RIKEN cDNA 9230110C19 gene, transcript variant X2
35. Dhx16 ENSMUSG00000024422 828 0.939 - 0.939 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Source:MGI Symbol;Acc:MGI:1916442]
36. Mum1l1 ENSMUSG00000042515 1576 0.939 - 0.939 - - - - melanoma associated antigen (mutated) 1-like 1 [Source:MGI Symbol;Acc:MGI:2445062]
37. Klhl18 ENSMUSG00000054792 443 0.938 - 0.938 - - - - kelch-like 18 [Source:MGI Symbol;Acc:MGI:2143315]
38. Ttc21b ENSMUSG00000034848 584 0.938 - 0.938 - - - - tetratricopeptide repeat domain 21B [Source:MGI Symbol;Acc:MGI:1920918]
39. Dach2 ENSMUSG00000025592 622 0.938 - 0.938 - - - - dachshund family transcription factor 2 [Source:MGI Symbol;Acc:MGI:1890446]
40. Gm17167 ENSMUSG00000091542 371 0.937 - 0.937 - - - - predicted gene 17167 [Source:MGI Symbol;Acc:MGI:4937994]
41. Slc31a2 ENSMUSG00000066152 323 0.937 - 0.937 - - - - solute carrier family 31, member 2 [Source:MGI Symbol;Acc:MGI:1333844]
42. Dusp5 ENSMUSG00000034765 478 0.937 - 0.937 - - - - dual specificity phosphatase 5 [Source:MGI Symbol;Acc:MGI:2685183]
43. Dusp2 ENSMUSG00000027368 534 0.935 - 0.935 - - - - dual specificity phosphatase 2 [Source:MGI Symbol;Acc:MGI:101911]
44. Slc27a4 ENSMUSG00000059316 1108 0.935 - 0.935 - - - - solute carrier family 27 (fatty acid transporter), member 4 [Source:MGI Symbol;Acc:MGI:1347347]
45. Sox7 ENSMUSG00000063060 538 0.933 - 0.933 - - - - SRY (sex determining region Y)-box 7 [Source:MGI Symbol;Acc:MGI:98369]
46. Mlh3 ENSMUSG00000021245 389 0.933 - 0.933 - - - - mutL homolog 3 [Source:MGI Symbol;Acc:MGI:1353455]
47. Ndufaf3 ENSMUSG00000070283 346 0.932 - 0.932 - - - - NADH:ubiquinone oxidoreductase complex assembly factor 3 [Source:MGI Symbol;Acc:MGI:1913956]
48. Shc2 ENSMUSG00000020312 611 0.929 - 0.929 - - - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:MGI Symbol;Acc:MGI:106180]
49. Nat10 ENSMUSG00000027185 602 0.929 - 0.929 - - - - N-acetyltransferase 10 [Source:MGI Symbol;Acc:MGI:2138939]
50. Slc29a4 ENSMUSG00000050822 399 0.929 - 0.929 - - - - solute carrier family 29 (nucleoside transporters), member 4 [Source:MGI Symbol;Acc:MGI:2385330]
51. Klhl24 ENSMUSG00000062901 598 0.928 - 0.928 - - - - kelch-like 24 [Source:MGI Symbol;Acc:MGI:1923035]
52. Bnip3 ENSMUSG00000078566 3134 0.928 - 0.928 - - - - BCL2/adenovirus E1B interacting protein 3 [Source:MGI Symbol;Acc:MGI:109326]
53. Nudt2 ENSMUSG00000028443 698 0.927 - 0.927 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:MGI Symbol;Acc:MGI:1913651]
54. Pqlc1 ENSMUSG00000034006 467 0.926 - 0.926 - - - - PQ loop repeat containing 1 [Source:MGI Symbol;Acc:MGI:1914193]
55. Rmi1 ENSMUSG00000035367 647 0.925 - 0.925 - - - - RecQ mediated genome instability 1 [Source:MGI Symbol;Acc:MGI:1921636]
56. Rchy1 ENSMUSG00000029397 1938 0.925 - 0.925 - - - - ring finger and CHY zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1915348]
57. Snx24 ENSMUSG00000024535 873 0.925 - 0.925 - - - - sorting nexing 24 [Source:MGI Symbol;Acc:MGI:1916476]
58. Accs ENSMUSG00000040272 397 0.925 - 0.925 - - - - 1-aminocyclopropane-1-carboxylate synthase (non-functional) [Source:MGI Symbol;Acc:MGI:1919717]
59. Akr1e1 ENSMUSG00000045410 1240 0.924 - 0.924 - - - - aldo-keto reductase family 1, member E1 [Source:MGI Symbol;Acc:MGI:1914758]
60. Stc1 ENSMUSG00000014813 363 0.924 - 0.924 - - - - stanniocalcin 1 [Source:MGI Symbol;Acc:MGI:109131]
61. Abhd8 ENSMUSG00000007950 711 0.924 - 0.924 - - - - abhydrolase domain containing 8 [Source:MGI Symbol;Acc:MGI:1918946]
62. Zbtb39 ENSMUSG00000044617 771 0.923 - 0.923 - - - - zinc finger and BTB domain containing 39 [Source:MGI Symbol;Acc:MGI:2443316]
63. Gnpnat1 ENSMUSG00000037722 795 0.923 - 0.923 - - - - glucosamine-phosphate N-acetyltransferase 1 [Source:MGI Symbol;Acc:MGI:1858963]
64. Csgalnact2 ENSMUSG00000042042 405 0.923 - 0.923 - - - - chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:MGI Symbol;Acc:MGI:1926002]
65. Med14 ENSMUSG00000064127 1226 0.923 - 0.923 - - - - mediator complex subunit 14 [Source:MGI Symbol;Acc:MGI:1349442]
66. St7l ENSMUSG00000045576 810 0.923 - 0.923 - - - - suppression of tumorigenicity 7-like [Source:MGI Symbol;Acc:MGI:2386964]
67. Mfsd7b 498 0.922 - 0.922 - - - - major facilitator superfamily domain containing 7B, transcript variant X1
68. 4933434E20Rik ENSMUSG00000027942 2164 0.921 - 0.921 - - - - RIKEN cDNA 4933434E20 gene [Source:MGI Symbol;Acc:MGI:1914027]
69. Crtc1 ENSMUSG00000003575 621 0.921 - 0.921 - - - - CREB regulated transcription coactivator 1 [Source:MGI Symbol;Acc:MGI:2142523]
70. Xpo5 ENSMUSG00000067150 682 0.92 - 0.920 - - - - exportin 5 [Source:MGI Symbol;Acc:MGI:1913789]
71. Sdk2 ENSMUSG00000041592 3074 0.92 - 0.920 - - - - sidekick cell adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:2443847]
72. Extl2 ENSMUSG00000027963 931 0.92 - 0.920 - - - - exostoses (multiple)-like 2 [Source:MGI Symbol;Acc:MGI:1889574]
73. Dap ENSMUSG00000039168 1762 0.918 - 0.918 - - - - death-associated protein [Source:MGI Symbol;Acc:MGI:1918190]
74. Thumpd3 ENSMUSG00000030264 1038 0.918 - 0.918 - - - - THUMP domain containing 3 [Source:MGI Symbol;Acc:MGI:1277973]
75. Ppp3r1 ENSMUSG00000033953 1296 0.918 - 0.918 - - - - protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) [Source:MGI Symbol;Acc:MGI:107172]
76. Ttc13 ENSMUSG00000037300 1595 0.918 - 0.918 - - - - tetratricopeptide repeat domain 13 [Source:MGI Symbol;Acc:MGI:2384573]
77. Pygb ENSMUSG00000033059 1366 0.918 - 0.918 - - - - brain glycogen phosphorylase [Source:MGI Symbol;Acc:MGI:97828]
78. Fam188a 930 0.917 - 0.917 - - - - family with sequence similarity 188, member A, transcript variant X3
79. Slc7a6 ENSMUSG00000031904 1103 0.917 - 0.917 - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 [Source:MGI Symbol;Acc:MGI:2142598]
80. Ddx19a ENSMUSG00000015023 3351 0.917 - 0.917 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a [Source:MGI Symbol;Acc:MGI:99526]
81. Pithd1 ENSMUSG00000028669 709 0.917 - 0.917 - - - - PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1 [Source:MGI Symbol;Acc:MGI:1913443]
82. Dcaf5 ENSMUSG00000049106 947 0.916 - 0.916 - - - - DDB1 and CUL4 associated factor 5 [Source:MGI Symbol;Acc:MGI:2444785]
83. Gm13349 ENSMUSG00000082520 302 0.916 - 0.916 - - - - predicted gene 13349 [Source:MGI Symbol;Acc:MGI:3649966]
84. Caml ENSMUSG00000021501 3056 0.916 - 0.916 - - - - calcium modulating ligand [Source:MGI Symbol;Acc:MGI:104728]
85. Mrpl23-ps1 ENSMUSG00000075279 486 0.915 - 0.915 - - - - mitichondrial ribosomal protein L23, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3650679]
86. Slc36a4 ENSMUSG00000043885 603 0.915 - 0.915 - - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:MGI Symbol;Acc:MGI:2442595]
87. Fbxl16 ENSMUSG00000025738 443 0.915 - 0.915 - - - - F-box and leucine-rich repeat protein 16 [Source:MGI Symbol;Acc:MGI:2448488]
88. Pacs1 ENSMUSG00000024855 1048 0.915 - 0.915 - - - - phosphofurin acidic cluster sorting protein 1 [Source:MGI Symbol;Acc:MGI:1277113]
89. Atg16l1 ENSMUSG00000026289 1129 0.915 - 0.915 - - - - autophagy related 16-like 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1924290]
90. Mboat7 ENSMUSG00000035596 1767 0.914 - 0.914 - - - - membrane bound O-acyltransferase domain containing 7 [Source:MGI Symbol;Acc:MGI:1924832]
91. Snhg6 ENSMUSG00000098234 549 0.914 - 0.914 - - - - small nucleolar RNA host gene 6 [Source:MGI Symbol;Acc:MGI:1921074]
92. Leprot ENSMUSG00000035212 3389 0.912 - 0.912 - - - - leptin receptor overlapping transcript [Source:MGI Symbol;Acc:MGI:2687005]
93. Vangl2 ENSMUSG00000026556 2575 0.912 - 0.912 - - - - VANGL planar cell polarity 2 [Source:MGI Symbol;Acc:MGI:2135272]
94. Arid3a ENSMUSG00000019564 2116 0.912 - 0.912 - - - - AT rich interactive domain 3A (BRIGHT-like) [Source:MGI Symbol;Acc:MGI:1328360]
95. Fam219b ENSMUSG00000032305 534 0.911 - 0.911 - - - - family with sequence similarity 219, member B [Source:MGI Symbol;Acc:MGI:1925573]
96. Rxra ENSMUSG00000015846 670 0.911 - 0.911 - - - - retinoid X receptor alpha [Source:MGI Symbol;Acc:MGI:98214]
97. Nr2c1 ENSMUSG00000005897 852 0.91 - 0.910 - - - - nuclear receptor subfamily 2, group C, member 1 [Source:MGI Symbol;Acc:MGI:1352465]
98. Rnf111 ENSMUSG00000032217 1237 0.91 - 0.910 - - - - ring finger 111 [Source:MGI Symbol;Acc:MGI:1934919]
99. Mrps6 ENSMUSG00000039680 1637 0.91 - 0.910 - - - - mitochondrial ribosomal protein S6 [Source:MGI Symbol;Acc:MGI:2153111]
100. Mfsd5 ENSMUSG00000045665 541 0.909 - 0.909 - - - - major facilitator superfamily domain containing 5 [Source:MGI Symbol;Acc:MGI:2145901]

There are 218 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA