Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Ctcf

Gene Name Gene ID Reads Annotation
Ctcf ENSMUSG00000005698 3929 CCCTC-binding factor [Source:MGI Symbol;Acc:MGI:109447]







Genes with expression patterns similar to Ctcf

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ctcf ENSMUSG00000005698 3929 6 1.000 1.000 1.000 1.000 1.000 1.000 CCCTC-binding factor [Source:MGI Symbol;Acc:MGI:109447]
2. AW146154 ENSMUSG00000074166 587 1.506 - 0.738 - - 0.768 - expressed sequence AW146154 [Source:MGI Symbol;Acc:MGI:2142212]
3. Eed ENSMUSG00000030619 1900 1.501 - 0.749 - - 0.752 - embryonic ectoderm development [Source:MGI Symbol;Acc:MGI:95286]
4. Cep192 ENSMUSG00000024542 1349 1.472 - 0.757 - - 0.715 - centrosomal protein 192 [Source:MGI Symbol;Acc:MGI:1918049]
5. Frg1 ENSMUSG00000031590 1255 1.416 - 0.700 - - 0.716 - FSHD region gene 1 [Source:MGI Symbol;Acc:MGI:893597]
6. Impa1 ENSMUSG00000027531 2027 0.872 - 0.872 - - - - inositol (myo)-1(or 4)-monophosphatase 1 [Source:MGI Symbol;Acc:MGI:1933158]
7. Ndufs7 ENSMUSG00000020153 1141 0.857 - 0.857 - - - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:MGI Symbol;Acc:MGI:1922656]
8. Camsap2 ENSMUSG00000041570 2915 0.852 - 0.852 - - - - calmodulin regulated spectrin-associated protein family, member 2 [Source:MGI Symbol;Acc:MGI:1922434]
9. Rpl9 ENSMUSG00000047215 1086 0.85 - 0.850 - - - - ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:1298373]
10. Hipk2 ENSMUSG00000061436 1244 0.85 - - - - 0.850 - homeodomain interacting protein kinase 2 [Source:MGI Symbol;Acc:MGI:1314872]
11. Ralbp1 ENSMUSG00000024096 4172 0.847 - 0.847 - - - - ralA binding protein 1 [Source:MGI Symbol;Acc:MGI:108466]
12. Syce2 ENSMUSG00000003824 1083 0.844 - 0.844 - - - - synaptonemal complex central element protein 2 [Source:MGI Symbol;Acc:MGI:1919096]
13. Ncaph2 ENSMUSG00000008690 2289 0.843 - 0.843 - - - - non-SMC condensin II complex, subunit H2 [Source:MGI Symbol;Acc:MGI:1289164]
14. Gcc2 ENSMUSG00000038039, ENSMUSG00000107275 3051 0.843 - 0.843 - - - - GRIP and coiled-coil domain containing 2 [Source:MGI Symbol;Acc:MGI:1917547]
15. H13 ENSMUSG00000019188 2517 0.842 - 0.842 - - - - histocompatibility 13 [Source:MGI Symbol;Acc:MGI:95886]
16. Mex3b ENSMUSG00000057706 3344 0.838 - 0.838 - - - - mex3 RNA binding family member B [Source:MGI Symbol;Acc:MGI:1918252]
17. Six4 ENSMUSG00000034460 841 0.836 - 0.836 - - - - sine oculis-related homeobox 4 [Source:MGI Symbol;Acc:MGI:106034]
18. Polr3b ENSMUSG00000034453 2141 0.835 - 0.835 - - - - polymerase (RNA) III (DNA directed) polypeptide B [Source:MGI Symbol;Acc:MGI:1917678]
19. Plekhg2 ENSMUSG00000037552 2138 0.835 - 0.835 - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 2 [Source:MGI Symbol;Acc:MGI:2141874]
20. Mon2 ENSMUSG00000034602 2162 0.834 - - - - 0.834 - MON2 homolog, regulator of endosome to Golgi trafficking [Source:MGI Symbol;Acc:MGI:1914324]
21. Tcp11l1 ENSMUSG00000027175 1931 0.832 - 0.832 - - - - t-complex 11 like 1 [Source:MGI Symbol;Acc:MGI:2444263]
22. Kdm3a ENSMUSG00000053470 833 0.83 - - - - 0.830 - lysine (K)-specific demethylase 3A [Source:MGI Symbol;Acc:MGI:98847]
23. Phf20l1 ENSMUSG00000072501 1844 0.829 - 0.829 - - - - PHD finger protein 20-like 1 [Source:MGI Symbol;Acc:MGI:2444412]
24. 2810001G20Rik ENSMUSG00000087497 460 0.829 - 0.829 - - - - RIKEN cDNA 2810001G20 gene [Source:MGI Symbol;Acc:MGI:1913706]
25. Zfp606 ENSMUSG00000030386 2199 0.827 - 0.827 - - - - zinc finger protein 606 [Source:MGI Symbol;Acc:MGI:1914620]
26. Krr1 ENSMUSG00000063334 2712 0.826 - - - - 0.826 - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:MGI Symbol;Acc:MGI:1289274]
27. Utp14a ENSMUSG00000063785 2135 0.825 - 0.825 - - - - UTP14A small subunit processome component [Source:MGI Symbol;Acc:MGI:1919804]
28. Snf8 ENSMUSG00000006058 973 0.825 - 0.825 - - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1343161]
29. Cdc25a ENSMUSG00000032477 3539 0.824 - 0.824 - - - - cell division cycle 25A [Source:MGI Symbol;Acc:MGI:103198]
30. Gm6311 ENSMUSG00000061833 161 0.823 - - - - 0.823 - predicted gene 6311 [Source:MGI Symbol;Acc:MGI:3644735]
31. Magi2 ENSMUSG00000040003 291 0.817 - - - - 0.817 - membrane associated guanylate kinase, WW and PDZ domain containing 2 [Source:MGI Symbol;Acc:MGI:1354953]
32. Bcas2 ENSMUSG00000005687 4804 0.816 - 0.816 - - - - breast carcinoma amplified sequence 2 [Source:MGI Symbol;Acc:MGI:1915433]
33. Rpl19-ps11 ENSMUSG00000081094 4177 0.816 - 0.816 - - - - ribosomal protein L19, pseudogene 11 [Source:MGI Symbol;Acc:MGI:3642193]
34. Trp53bp2 ENSMUSG00000026510 1450 0.812 - - - - 0.812 - transformation related protein 53 binding protein 2 [Source:MGI Symbol;Acc:MGI:2138319]
35. Pigs ENSMUSG00000041958 765 0.811 - - - - 0.811 - phosphatidylinositol glycan anchor biosynthesis, class S [Source:MGI Symbol;Acc:MGI:2687325]
36. Med27 ENSMUSG00000026799 923 0.808 - - - - 0.808 - mediator complex subunit 27 [Source:MGI Symbol;Acc:MGI:1916225]
37. Nfkbia ENSMUSG00000021025 1709 0.808 - 0.808 - - - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha [Source:MGI Symbol;Acc:MGI:104741]
38. Steap2 ENSMUSG00000015653 632 0.807 - 0.807 - - - - six transmembrane epithelial antigen of prostate 2 [Source:MGI Symbol;Acc:MGI:1921301]
39. Appl2 ENSMUSG00000020263 993 0.803 - 0.803 - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 [Source:MGI Symbol;Acc:MGI:2384914]
40. Unc5b ENSMUSG00000020099 2186 0.799 - 0.799 - - - - unc-5 netrin receptor B [Source:MGI Symbol;Acc:MGI:894703]
41. Arhgef1 ENSMUSG00000040940 1610 0.799 - 0.799 - - - - Rho guanine nucleotide exchange factor (GEF) 1 [Source:MGI Symbol;Acc:MGI:1353510]
42. Trip12 ENSMUSG00000026219 7818 0.797 - 0.797 - - - - thyroid hormone receptor interactor 12 [Source:MGI Symbol;Acc:MGI:1309481]
43. Dpp8 ENSMUSG00000032393 1163 0.796 - - - - 0.796 - dipeptidylpeptidase 8 [Source:MGI Symbol;Acc:MGI:1921638]
44. Plscr3 ENSMUSG00000019461 2783 0.796 - 0.796 - - - - phospholipid scramblase 3 [Source:MGI Symbol;Acc:MGI:1917560]
45. Cdca3 ENSMUSG00000023505 4570 0.795 - - - - 0.795 - cell division cycle associated 3 [Source:MGI Symbol;Acc:MGI:1315198]
46. Irx3 ENSMUSG00000031734 610 0.793 - - - - 0.793 - Iroquois related homeobox 3 [Source:MGI Symbol;Acc:MGI:1197522]
47. Add3 ENSMUSG00000025026 5192 0.793 - 0.793 - - - - adducin 3 (gamma) [Source:MGI Symbol;Acc:MGI:1351615]
48. Smyd2 ENSMUSG00000026603 2210 0.792 - 0.792 - - - - SET and MYND domain containing 2 [Source:MGI Symbol;Acc:MGI:1915889]
49. Atad5 ENSMUSG00000017550 1343 0.791 - - - - 0.791 - ATPase family, AAA domain containing 5 [Source:MGI Symbol;Acc:MGI:2442925]
50. Decr2 ENSMUSG00000036775 1047 0.79 - 0.790 - - - - 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1347059]
51. Mark4 ENSMUSG00000030397 335 0.789 - - - - 0.789 - MAP/microtubule affinity regulating kinase 4 [Source:MGI Symbol;Acc:MGI:1920955]
52. Ndufb10 ENSMUSG00000040048 1810 0.789 - - - - 0.789 - NADH:ubiquinone oxidoreductase subunit B10 [Source:MGI Symbol;Acc:MGI:1915592]
53. D030055H07Rik ENSMUSG00000086296 161 0.788 - - - - 0.788 - RIKEN cDNA D030055H07 gene [Source:MGI Symbol;Acc:MGI:3605036]
54. Bcap29 ENSMUSG00000020650 559 0.788 - - - - 0.788 - B cell receptor associated protein 29 [Source:MGI Symbol;Acc:MGI:101917]
55. Usp36 ENSMUSG00000033909 2464 0.787 - 0.787 - - - - ubiquitin specific peptidase 36 [Source:MGI Symbol;Acc:MGI:1919594]
56. Abcg4 ENSMUSG00000032131 186 0.787 - - - - 0.787 - ATP binding cassette subfamily G member 4 [Source:MGI Symbol;Acc:MGI:1890594]
57. Wwp2 ENSMUSG00000031930 1374 0.785 - - - - 0.785 - WW domain containing E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:1914144]
58. Cops8 ENSMUSG00000034432 3968 0.784 - 0.784 - - - - COP9 signalosome subunit 8 [Source:MGI Symbol;Acc:MGI:1915363]
59. Zfp354a ENSMUSG00000020364 242 0.784 - - - - 0.784 - zinc finger protein 354A [Source:MGI Symbol;Acc:MGI:103172]
60. Gatad2b ENSMUSG00000042390 1312 0.784 - 0.784 - - - - GATA zinc finger domain containing 2B [Source:MGI Symbol;Acc:MGI:2443225]
61. Sox5 ENSMUSG00000041540 1198 0.784 - 0.784 - - - - SRY (sex determining region Y)-box 5 [Source:MGI Symbol;Acc:MGI:98367]
62. Ankrd42 ENSMUSG00000041343 120 0.783 - - - - 0.783 - ankyrin repeat domain 42 [Source:MGI Symbol;Acc:MGI:1921095]
63. Il18bp ENSMUSG00000070427 230 0.783 - - - - 0.783 - interleukin 18 binding protein [Source:MGI Symbol;Acc:MGI:1333800]
64. Fbxl19 ENSMUSG00000030811 233 0.782 - - - - 0.782 - F-box and leucine-rich repeat protein 19 [Source:MGI Symbol;Acc:MGI:3039600]
65. Zic2 ENSMUSG00000061524 472 0.781 - - - - 0.781 - zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
66. Atp5e ENSMUSG00000016252 12077 0.781 - 0.781 - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit [Source:MGI Symbol;Acc:MGI:1855697]
67. Usp31 ENSMUSG00000063317 2365 0.78 - - - - 0.780 - ubiquitin specific peptidase 31 [Source:MGI Symbol;Acc:MGI:1923429]
68. Rpl35a ENSMUSG00000060636 411 0.78 - - - - 0.780 - ribosomal protein L35A [Source:MGI Symbol;Acc:MGI:1928894]
69. Bola1 ENSMUSG00000015943 1433 0.78 - 0.780 - - - - bolA-like 1 (E. coli) [Source:MGI Symbol;Acc:MGI:1916418]
70. Lonp2 ENSMUSG00000047866 1312 0.78 - 0.780 - - - - lon peptidase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1914137]
71. Slc4a1 ENSMUSG00000006574 348 0.779 - - - - 0.779 - solute carrier family 4 (anion exchanger), member 1 [Source:MGI Symbol;Acc:MGI:109393]
72. Gm9864 ENSMUSG00000052005 829 0.779 - - - - 0.779 - predicted gene 9864 [Source:MGI Symbol;Acc:MGI:3708663]
73. Ndufb6 ENSMUSG00000071014 2988 0.779 - - - - 0.779 - NADH:ubiquinone oxidoreductase subunit B6 [Source:MGI Symbol;Acc:MGI:2684983]
74. Slc25a14 ENSMUSG00000031105 506 0.779 - - - - 0.779 - solute carrier family 25 (mitochondrial carrier, brain), member 14 [Source:MGI Symbol;Acc:MGI:1330823]
75. Btbd9 ENSMUSG00000062202 1289 0.779 - 0.779 - - - - BTB (POZ) domain containing 9 [Source:MGI Symbol;Acc:MGI:1916625]
76. Fgf13 ENSMUSG00000031137 365 0.779 - - - - 0.779 - fibroblast growth factor 13 [Source:MGI Symbol;Acc:MGI:109178]
77. Arfip2 ENSMUSG00000030881 1538 0.778 - - - - 0.778 - ADP-ribosylation factor interacting protein 2 [Source:MGI Symbol;Acc:MGI:1924182]
78. Hus1 ENSMUSG00000020413 906 0.778 - - - - 0.778 - HUS1 checkpoint clamp component [Source:MGI Symbol;Acc:MGI:1277962]
79. Frs2 ENSMUSG00000020170 1424 0.778 - - - - 0.778 - fibroblast growth factor receptor substrate 2 [Source:MGI Symbol;Acc:MGI:1100860]
80. B130046B21Rik ENSMUSG00000097414 59 0.777 - - - - 0.777 - RIKEN cDNA B130046B21 gene [Source:MGI Symbol;Acc:MGI:3704458]
81. Nmral1 ENSMUSG00000063445 5289 0.777 - 0.777 - - - - NmrA-like family domain containing 1 [Source:MGI Symbol;Acc:MGI:1915074]
82. Gm13775 ENSMUSG00000081207 54 0.777 - - - - 0.777 - predicted gene 13775 [Source:MGI Symbol;Acc:MGI:3712466]
83. Ppm1e ENSMUSG00000046442 270 0.777 - - - - 0.777 - protein phosphatase 1E (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:2444096]
84. Bai3 Bai3 552 0.777 - - - - 0.777 -
85. Gm11975 ENSMUSG00000084231 70 0.777 - - - - 0.777 - predicted gene 11975 [Source:MGI Symbol;Acc:MGI:3650057]
86. Ddx26b 1085 0.776 - - - - 0.776 - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X2
87. Gm17414 Gm17414 131 0.776 - - - - 0.776 -
88. Nudt11 ENSMUSG00000073295 757 0.776 - - - - 0.776 - nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
89. Mzf1 ENSMUSG00000030380 234 0.776 - - - - 0.776 - myeloid zinc finger 1 [Source:MGI Symbol;Acc:MGI:107457]
90. Skint8 ENSMUSG00000078599 109 0.775 - - - - 0.775 - selection and upkeep of intraepithelial T cells 8 [Source:MGI Symbol;Acc:MGI:3651523]
91. Degs1 ENSMUSG00000038633 1717 0.775 - 0.775 - - - - delta(4)-desaturase, sphingolipid 1 [Source:MGI Symbol;Acc:MGI:1097711]
92. Parp3 ENSMUSG00000023249 110 0.775 - - - - 0.775 - poly (ADP-ribose) polymerase family, member 3 [Source:MGI Symbol;Acc:MGI:1891258]
93. Ddx42 ENSMUSG00000020705 5329 0.775 - 0.775 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Source:MGI Symbol;Acc:MGI:1919297]
94. Csrp2bp 1398 0.775 - 0.775 - - - - cysteine and glycine-rich protein 2 binding protein, transcript variant 1
95. Chrna4 ENSMUSG00000027577 941 0.775 - - - - 0.775 - cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
96. Rassf7 ENSMUSG00000038618 391 0.775 - - - - 0.775 - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 [Source:MGI Symbol;Acc:MGI:1914235]
97. Nup98 ENSMUSG00000063550 482 0.774 - - - - 0.774 - nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404]
98. Orc3 ENSMUSG00000040044 862 0.774 - - - - 0.774 - origin recognition complex, subunit 3 [Source:MGI Symbol;Acc:MGI:1354944]
99. Ppp3cb ENSMUSG00000021816 6623 0.773 - - - - 0.773 - protein phosphatase 3, catalytic subunit, beta isoform [Source:MGI Symbol;Acc:MGI:107163]
100. Scai ENSMUSG00000035236 2707 0.773 - 0.773 - - - - suppressor of cancer cell invasion [Source:MGI Symbol;Acc:MGI:2443716]

There are 397 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA