Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Cpsf3

Gene Name Gene ID Reads Annotation
Cpsf3 ENSMUSG00000054309 1861 cleavage and polyadenylation specificity factor 3 [Source:MGI Symbol;Acc:MGI:1859328]







Genes with expression patterns similar to Cpsf3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cpsf3 ENSMUSG00000054309 1861 6 1.000 1.000 1.000 1.000 1.000 1.000 cleavage and polyadenylation specificity factor 3 [Source:MGI Symbol;Acc:MGI:1859328]
2. Gm9083 ENSMUSG00000083033 141 1.55 - - - - 0.838 0.712 predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
3. Cdk10 ENSMUSG00000033862 738 1.546 - - - - 0.822 0.724 cyclin-dependent kinase 10 [Source:MGI Symbol;Acc:MGI:2448549]
4. Rnf7 ENSMUSG00000051234 6537 1.533 0.797 0.736 - - - - ring finger protein 7 [Source:MGI Symbol;Acc:MGI:1337096]
5. Ppp5c ENSMUSG00000003099 995 1.516 - - - - 0.728 0.788 protein phosphatase 5, catalytic subunit [Source:MGI Symbol;Acc:MGI:102666]
6. Cd151 ENSMUSG00000025510 2760 1.467 - 0.700 - - 0.767 - CD151 antigen [Source:MGI Symbol;Acc:MGI:1096360]
7. Ppp1r12a ENSMUSG00000019907 2010 1.438 0.720 - - - - 0.718 protein phosphatase 1, regulatory subunit 12A [Source:MGI Symbol;Acc:MGI:1309528]
8. Nuak2 ENSMUSG00000009772 426 0.859 - - - - 0.859 - NUAK family, SNF1-like kinase, 2 [Source:MGI Symbol;Acc:MGI:1921387]
9. Crybg3 ENSMUSG00000022723 117 0.858 - - - - 0.858 - beta-gamma crystallin domain containing 3 [Source:MGI Symbol;Acc:MGI:2676311]
10. Ube2i ENSMUSG00000015120 2950 0.855 - - - - 0.855 - ubiquitin-conjugating enzyme E2I [Source:MGI Symbol;Acc:MGI:107365]
11. Flot2 ENSMUSG00000061981 864 0.854 - - - - 0.854 - flotillin 2 [Source:MGI Symbol;Acc:MGI:103309]
12. Ext1 ENSMUSG00000061731 1991 0.853 0.853 - - - - - exostoses (multiple) 1 [Source:MGI Symbol;Acc:MGI:894663]
13. Ddx27 ENSMUSG00000017999 1798 0.852 - - - - 0.852 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:MGI Symbol;Acc:MGI:2385884]
14. Sgsm3 ENSMUSG00000042303 608 0.848 - - - - 0.848 - small G protein signaling modulator 3 [Source:MGI Symbol;Acc:MGI:1916329]
15. 1700052N19Rik 1700052N19Rik 913 0.847 0.847 - - - - -
16. Ddt ENSMUSG00000001666 1681 0.846 - - - - 0.846 - D-dopachrome tautomerase [Source:MGI Symbol;Acc:MGI:1298381]
17. Zbtb22 ENSMUSG00000051390 1005 0.842 - - - - 0.842 - zinc finger and BTB domain containing 22 [Source:MGI Symbol;Acc:MGI:1931870]
18. Srxn1 ENSMUSG00000032802 244 0.842 - - - - 0.842 - sulfiredoxin 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104971]
19. Spred1 ENSMUSG00000027351 2590 0.842 - - - - 0.842 - sprouty protein with EVH-1 domain 1, related sequence [Source:MGI Symbol;Acc:MGI:2150016]
20. Kcnab2 ENSMUSG00000028931 291 0.84 - - - - 0.840 - potassium voltage-gated channel, shaker-related subfamily, beta member 2 [Source:MGI Symbol;Acc:MGI:109239]
21. Ccdc177 ENSMUSG00000062961 159 0.84 - - - - 0.840 - coiled-coil domain containing 177 [Source:MGI Symbol;Acc:MGI:2686414]
22. Katnb1 ENSMUSG00000031787 333 0.838 - - - - 0.838 - katanin p80 (WD40-containing) subunit B 1 [Source:MGI Symbol;Acc:MGI:1921437]
23. Ampd3 ENSMUSG00000005686 113 0.836 - - - - 0.836 - adenosine monophosphate deaminase 3 [Source:MGI Symbol;Acc:MGI:1096344]
24. Xpc ENSMUSG00000030094 530 0.836 - - - - 0.836 - xeroderma pigmentosum, complementation group C [Source:MGI Symbol;Acc:MGI:103557]
25. A330076H08Rik ENSMUSG00000109321 378 0.836 0.836 - - - - - RIKEN cDNA A330076H08 gene [Source:MGI Symbol;Acc:MGI:2443193]
26. Lpin1 ENSMUSG00000020593 407 0.836 - - - - 0.836 - lipin 1 [Source:MGI Symbol;Acc:MGI:1891340]
27. Cmpk2 ENSMUSG00000020638 304 0.835 - - - - 0.835 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:99830]
28. Sec14l2 ENSMUSG00000003585 109 0.835 - - - - 0.835 - SEC14-like lipid binding 2 [Source:MGI Symbol;Acc:MGI:1915065]
29. Bcat1 ENSMUSG00000030268 1915 0.835 - - - - 0.835 - branched chain aminotransferase 1, cytosolic [Source:MGI Symbol;Acc:MGI:104861]
30. Ddx47 ENSMUSG00000030204 1576 0.835 - - - - 0.835 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:MGI Symbol;Acc:MGI:1915005]
31. Jazf1 ENSMUSG00000063568 47 0.834 - - - - 0.834 - JAZF zinc finger 1 [Source:MGI Symbol;Acc:MGI:2141450]
32. E030013I19Rik ENSMUSG00000086843 118 0.834 - - - - 0.834 - RIKEN cDNA E030013I19 gene [Source:MGI Symbol;Acc:MGI:2443735]
33. Pmel ENSMUSG00000025359 54 0.834 - - - - 0.834 - premelanosome protein [Source:MGI Symbol;Acc:MGI:98301]
34. Gm5644 ENSMUSG00000100104 76 0.834 - - - - 0.834 - predicted gene 5644 [Source:MGI Symbol;Acc:MGI:3646381]
35. Wars ENSMUSG00000021266 1410 0.834 - - - - 0.834 - tryptophanyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:104630]
36. Mcoln1 ENSMUSG00000004567 281 0.834 - - - - 0.834 - mucolipin 1 [Source:MGI Symbol;Acc:MGI:1890498]
37. Tfpt ENSMUSG00000006335 157 0.833 - - - - 0.833 - TCF3 (E2A) fusion partner [Source:MGI Symbol;Acc:MGI:1916964]
38. Txnrd3 ENSMUSG00000000811 405 0.833 - - - - 0.833 - thioredoxin reductase 3 [Source:MGI Symbol;Acc:MGI:2386711]
39. Vmn1r132 ENSMUSG00000074322 39 0.833 - - - - 0.833 - vomeronasal 1 receptor 132 [Source:MGI Symbol;Acc:MGI:3647009]
40. Tbc1d2 ENSMUSG00000039813 51 0.833 - - - - 0.833 - TBC1 domain family, member 2 [Source:MGI Symbol;Acc:MGI:2652885]
41. Ttc37 ENSMUSG00000033991 159 0.833 - - - - 0.833 - tetratricopeptide repeat domain 37 [Source:MGI Symbol;Acc:MGI:2679923]
42. Zc3h6 ENSMUSG00000042851 135 0.833 - - - - 0.833 - zinc finger CCCH type containing 6 [Source:MGI Symbol;Acc:MGI:1926001]
43. Gm11989 ENSMUSG00000083553 73 0.832 - - - - 0.832 - predicted gene 11989 [Source:MGI Symbol;Acc:MGI:3702318]
44. H2-D1 ENSMUSG00000073411 344 0.832 - - - - 0.832 - histocompatibility 2, D region locus 1 [Source:MGI Symbol;Acc:MGI:95896]
45. Fbxo8 ENSMUSG00000038206 1079 0.832 - - - - 0.832 - F-box protein 8 [Source:MGI Symbol;Acc:MGI:1354696]
46. Gzmc ENSMUSG00000079186 38 0.832 - - - - 0.832 - granzyme C [Source:MGI Symbol;Acc:MGI:109256]
47. Ccdc126 ENSMUSG00000050786 121 0.831 - - - - 0.831 - coiled-coil domain containing 126 [Source:MGI Symbol;Acc:MGI:1889376]
48. Fam134a 688 0.831 0.831 - - - - - family with sequence similarity 134, member A, transcript variant 1
49. Tmem25 ENSMUSG00000002032 100 0.831 - - - - 0.831 - transmembrane protein 25 [Source:MGI Symbol;Acc:MGI:1918937]
50. Bok ENSMUSG00000026278 242 0.83 - - - - 0.830 - BCL2-related ovarian killer [Source:MGI Symbol;Acc:MGI:1858494]
51. Gm23913 Gm23913 84 0.829 - - - - 0.829 -
52. Gm14813 ENSMUSG00000082549 69 0.829 - - - - 0.829 - predicted gene 14813 [Source:MGI Symbol;Acc:MGI:3705714]
53. Snph ENSMUSG00000027457 95 0.829 - - - - 0.829 - syntaphilin [Source:MGI Symbol;Acc:MGI:2139270]
54. 4930480K23Rik ENSMUSG00000097284 105 0.828 - - - - 0.828 - RIKEN cDNA 4930480K23 gene [Source:MGI Symbol;Acc:MGI:1922266]
55. Pla2g3 ENSMUSG00000034579 79 0.828 - - - - 0.828 - phospholipase A2, group III [Source:MGI Symbol;Acc:MGI:2444945]
56. Rhag ENSMUSG00000023926 119 0.828 - - - - 0.828 - Rhesus blood group-associated A glycoprotein [Source:MGI Symbol;Acc:MGI:1202713]
57. Mnt ENSMUSG00000000282 715 0.828 - - - - 0.828 - max binding protein [Source:MGI Symbol;Acc:MGI:109150]
58. Wnk4 ENSMUSG00000035112 162 0.828 - - - - 0.828 - WNK lysine deficient protein kinase 4 [Source:MGI Symbol;Acc:MGI:1917097]
59. Xcr1 ENSMUSG00000060509 282 0.827 - - - - 0.827 - chemokine (C motif) receptor 1 [Source:MGI Symbol;Acc:MGI:1346338]
60. Pex19 ENSMUSG00000003464 2015 0.827 0.827 - - - - - peroxisomal biogenesis factor 19 [Source:MGI Symbol;Acc:MGI:1334458]
61. Klhdc2 ENSMUSG00000020978 12529 0.827 - - - - 0.827 - kelch domain containing 2 [Source:MGI Symbol;Acc:MGI:1916804]
62. Pacsin1 ENSMUSG00000040276 185 0.827 - - - - 0.827 - protein kinase C and casein kinase substrate in neurons 1 [Source:MGI Symbol;Acc:MGI:1345181]
63. Grid2 ENSMUSG00000071424 180 0.827 - - - - 0.827 - glutamate receptor, ionotropic, delta 2 [Source:MGI Symbol;Acc:MGI:95813]
64. Krt20 ENSMUSG00000035775 230 0.826 - - - - 0.826 - keratin 20 [Source:MGI Symbol;Acc:MGI:1914059]
65. Acsl5 ENSMUSG00000024981 381 0.826 - - - - 0.826 - acyl-CoA synthetase long-chain family member 5 [Source:MGI Symbol;Acc:MGI:1919129]
66. Mul1 ENSMUSG00000041241 430 0.826 - - - - 0.826 - mitochondrial ubiquitin ligase activator of NFKB 1 [Source:MGI Symbol;Acc:MGI:1915600]
67. Kctd10 ENSMUSG00000001098 136 0.826 - - - - 0.826 - potassium channel tetramerisation domain containing 10 [Source:MGI Symbol;Acc:MGI:2141207]
68. Plxnc1 ENSMUSG00000074785 183 0.826 - - - - 0.826 - plexin C1 [Source:MGI Symbol;Acc:MGI:1890127]
69. Cyr61 ENSMUSG00000028195 563 0.826 - - - - 0.826 - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
70. Ppm1d ENSMUSG00000020525 1303 0.825 - - - - 0.825 - protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
71. Ppm1f ENSMUSG00000026181 531 0.824 - - - - 0.824 - protein phosphatase 1F (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:1918464]
72. Hivep3 ENSMUSG00000028634 196 0.823 - - - - 0.823 - human immunodeficiency virus type I enhancer binding protein 3 [Source:MGI Symbol;Acc:MGI:106589]
73. Surf2 ENSMUSG00000014873 372 0.823 - - - - 0.823 - surfeit gene 2 [Source:MGI Symbol;Acc:MGI:98444]
74. Rps13-ps1 ENSMUSG00000066362 2596 0.823 0.823 - - - - - ribosomal protein S13, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3647042]
75. Unc13b ENSMUSG00000028456 543 0.822 - - - - 0.822 - unc-13 homolog B [Source:MGI Symbol;Acc:MGI:1342278]
76. Apitd1 412 0.822 - - - - 0.822 - apoptosis-inducing, TAF9-like domain 1
77. Lmbr1 ENSMUSG00000010721 572 0.821 - - - - 0.821 - limb region 1 [Source:MGI Symbol;Acc:MGI:1861746]
78. 0610030E20Rik ENSMUSG00000058706, ENSMUSG00000108680 776 0.821 - - - - 0.821 - RIKEN cDNA 0610030E20 gene [Source:MGI Symbol;Acc:MGI:1915614]
79. Piga ENSMUSG00000031381 638 0.82 - - - - 0.820 - phosphatidylinositol glycan anchor biosynthesis, class A [Source:MGI Symbol;Acc:MGI:99461]
80. Med28 ENSMUSG00000015804 2949 0.82 - - - - 0.820 - mediator complex subunit 28 [Source:MGI Symbol;Acc:MGI:1914249]
81. Bloc1s4 ENSMUSG00000060708 964 0.82 0.820 - - - - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino [Source:MGI Symbol;Acc:MGI:1929230]
82. Plekha3 ENSMUSG00000002733 1222 0.819 0.819 - - - - - pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3 [Source:MGI Symbol;Acc:MGI:1932515]
83. Rbm34 ENSMUSG00000033931 1425 0.819 0.819 - - - - - RNA binding motif protein 34 [Source:MGI Symbol;Acc:MGI:1098653]
84. Fkbp11 ENSMUSG00000003355 578 0.819 - - - - 0.819 - FK506 binding protein 11 [Source:MGI Symbol;Acc:MGI:1913370]
85. Prmt10 Prmt10 1174 0.818 0.818 - - - - -
86. Ggps1 ENSMUSG00000021302 1070 0.818 - - - - 0.818 - geranylgeranyl diphosphate synthase 1 [Source:MGI Symbol;Acc:MGI:1341724]
87. Tmem189 ENSMUSG00000090213 1403 0.818 - - - - 0.818 - transmembrane protein 189 [Source:MGI Symbol;Acc:MGI:2142624]
88. Lrrc28 ENSMUSG00000030556 515 0.817 - - - - 0.817 - leucine rich repeat containing 28 [Source:MGI Symbol;Acc:MGI:1915689]
89. Ldb3 ENSMUSG00000021798 170 0.816 - - - - 0.816 - LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412]
90. 2610307P16Rik ENSMUSG00000085936 253 0.815 - - - - 0.815 - RIKEN cDNA 2610307P16 gene [Source:MGI Symbol;Acc:MGI:1919768]
91. Dmtn ENSMUSG00000022099 423 0.815 - - - - 0.815 - dematin actin binding protein [Source:MGI Symbol;Acc:MGI:99670]
92. Crem ENSMUSG00000063889 328 0.815 - - - - 0.815 - cAMP responsive element modulator [Source:MGI Symbol;Acc:MGI:88495]
93. Dlgap5 ENSMUSG00000037544 1311 0.815 - - - - 0.815 - DLG associated protein 5 [Source:MGI Symbol;Acc:MGI:2183453]
94. Ptges2 ENSMUSG00000026820 419 0.814 - - - - 0.814 - prostaglandin E synthase 2 [Source:MGI Symbol;Acc:MGI:1917592]
95. 5730455P16Rik ENSMUSG00000057181 986 0.814 - - - - 0.814 - RIKEN cDNA 5730455P16 gene [Source:MGI Symbol;Acc:MGI:1917841]
96. Cnpy3 ENSMUSG00000023973 1134 0.813 - - - - 0.813 - canopy FGF signaling regulator 3 [Source:MGI Symbol;Acc:MGI:1919279]
97. Bace1 ENSMUSG00000032086 1360 0.813 0.813 - - - - - beta-site APP cleaving enzyme 1 [Source:MGI Symbol;Acc:MGI:1346542]
98. Rfwd3 ENSMUSG00000033596 648 0.813 - - - - 0.813 - ring finger and WD repeat domain 3 [Source:MGI Symbol;Acc:MGI:2384584]
99. Itfg3 Itfg3 548 0.812 0.812 - - - - -
100. Frat2 ENSMUSG00000047604 478 0.811 - - - - 0.811 - frequently rearranged in advanced T cell lymphomas 2 [Source:MGI Symbol;Acc:MGI:2673967]

There are 387 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA