Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Copa

Gene Name Gene ID Reads Annotation
Copa ENSMUSG00000026553 8720 coatomer protein complex subunit alpha [Source:MGI Symbol;Acc:MGI:1334462]







Genes with expression patterns similar to Copa

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Copa ENSMUSG00000026553 8720 6 1.000 1.000 1.000 1.000 1.000 1.000 coatomer protein complex subunit alpha [Source:MGI Symbol;Acc:MGI:1334462]
2. Txn2 ENSMUSG00000005354 7983 0.981 0.981 - - - - - thioredoxin 2 [Source:MGI Symbol;Acc:MGI:1929468]
3. Psmd4 ENSMUSG00000005625 3457 0.981 0.981 - - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 [Source:MGI Symbol;Acc:MGI:1201670]
4. Mlf2 ENSMUSG00000030120 11457 0.969 0.969 - - - - - myeloid leukemia factor 2 [Source:MGI Symbol;Acc:MGI:1353554]
5. Cct6a ENSMUSG00000029447 13766 0.952 0.952 - - - - - chaperonin containing Tcp1, subunit 6a (zeta) [Source:MGI Symbol;Acc:MGI:107943]
6. Hspa5 ENSMUSG00000026864 21863 0.918 0.918 - - - - - heat shock protein 5 [Source:MGI Symbol;Acc:MGI:95835]
7. Coro1a ENSMUSG00000030707 606 0.879 0.879 - - - - - coronin, actin binding protein 1A [Source:MGI Symbol;Acc:MGI:1345961]
8. Sema4b ENSMUSG00000030539 1344 0.878 0.878 - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B [Source:MGI Symbol;Acc:MGI:107559]
9. Uba52 ENSMUSG00000090137 596 0.878 0.878 - - - - - ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887]
10. Cep89 ENSMUSG00000023072 738 0.878 0.878 - - - - - centrosomal protein 89 [Source:MGI Symbol;Acc:MGI:1919390]
11. Gpatch11 ENSMUSG00000050668 796 0.878 0.878 - - - - - G patch domain containing 11 [Source:MGI Symbol;Acc:MGI:1858435]
12. Zc2hc1a ENSMUSG00000043542 1781 0.878 0.878 - - - - - zinc finger, C2HC-type containing 1A [Source:MGI Symbol;Acc:MGI:1914556]
13. Mrpl4 ENSMUSG00000003299 1998 0.878 0.878 - - - - - mitochondrial ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:2137210]
14. Vps37c ENSMUSG00000048832 399 0.877 0.877 - - - - - vacuolar protein sorting 37C [Source:MGI Symbol;Acc:MGI:2147661]
15. Rpl18-ps1 ENSMUSG00000081382, ENSMUSG00000104421 832 0.877 0.877 - - - - - ribosomal protein L18, pseudogene 1 [Source:MGI Symbol;Acc:MGI:98018]
16. Fga ENSMUSG00000028001 637 0.877 0.877 - - - - - fibrinogen alpha chain [Source:MGI Symbol;Acc:MGI:1316726]
17. Snapc2 ENSMUSG00000011837 1458 0.877 0.877 - - - - - small nuclear RNA activating complex, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1914861]
18. Prps1 ENSMUSG00000031432 2566 0.877 0.877 - - - - - phosphoribosyl pyrophosphate synthetase 1 [Source:MGI Symbol;Acc:MGI:97775]
19. Ophn1 ENSMUSG00000031214 1005 0.877 0.877 - - - - - oligophrenin 1 [Source:MGI Symbol;Acc:MGI:2151070]
20. Thnsl1 ENSMUSG00000048550 750 0.877 0.877 - - - - - threonine synthase-like 1 (bacterial) [Source:MGI Symbol;Acc:MGI:2139347]
21. Tomm5 ENSMUSG00000078713 2795 0.877 0.877 - - - - - translocase of outer mitochondrial membrane 5 [Source:MGI Symbol;Acc:MGI:1915762]
22. Itgam ENSMUSG00000030786 399 0.877 0.877 - - - - - integrin alpha M [Source:MGI Symbol;Acc:MGI:96607]
23. Mms22l ENSMUSG00000045751 2917 0.876 0.876 - - - - - MMS22-like, DNA repair protein [Source:MGI Symbol;Acc:MGI:2684980]
24. Laptm4b ENSMUSG00000022257 3779 0.876 0.876 - - - - - lysosomal-associated protein transmembrane 4B [Source:MGI Symbol;Acc:MGI:1890494]
25. Sap18 ENSMUSG00000021963 1402 0.876 0.876 - - - - - Sin3-associated polypeptide 18 [Source:MGI Symbol;Acc:MGI:1277978]
26. 2410004N09Rik 2410004N09Rik 1843 0.876 0.876 - - - - -
27. Tnrc6c ENSMUSG00000025571 3072 0.876 0.876 - - - - - trinucleotide repeat containing 6C [Source:MGI Symbol;Acc:MGI:2443265]
28. 4933436C20Rik 4933436C20Rik 653 0.876 0.876 - - - - -
29. Ccdc115 ENSMUSG00000042111 1520 0.876 0.876 - - - - - coiled-coil domain containing 115 [Source:MGI Symbol;Acc:MGI:1916918]
30. Csnk1d ENSMUSG00000025162 9474 0.876 0.876 - - - - - casein kinase 1, delta [Source:MGI Symbol;Acc:MGI:1355272]
31. Casp9 ENSMUSG00000028914 1554 0.876 0.876 - - - - - caspase 9 [Source:MGI Symbol;Acc:MGI:1277950]
32. Tmod3 ENSMUSG00000058587 3578 0.875 0.875 - - - - - tropomodulin 3 [Source:MGI Symbol;Acc:MGI:1355315]
33. Cyb5r3 ENSMUSG00000018042 5089 0.875 0.875 - - - - - cytochrome b5 reductase 3 [Source:MGI Symbol;Acc:MGI:94893]
34. Mtfr1 ENSMUSG00000027601 1822 0.875 0.875 - - - - - mitochondrial fission regulator 1 [Source:MGI Symbol;Acc:MGI:1914722]
35. Sephs1 ENSMUSG00000026662 5526 0.875 0.875 - - - - - selenophosphate synthetase 1 [Source:MGI Symbol;Acc:MGI:1923580]
36. C330027C09Rik 2892 0.874 0.874 - - - - - RIKEN cDNA C330027C09 gene, transcript variant X2
37. E2f1 ENSMUSG00000027490 2357 0.874 0.874 - - - - - E2F transcription factor 1 [Source:MGI Symbol;Acc:MGI:101941]
38. Actr3 ENSMUSG00000026341 4146 0.874 0.874 - - - - - ARP3 actin-related protein 3 [Source:MGI Symbol;Acc:MGI:1921367]
39. Gm9843 ENSMUSG00000050299 3003 0.873 0.873 - - - - - predicted gene 9843 [Source:MGI Symbol;Acc:MGI:3708621]
40. Obsl1 ENSMUSG00000026211 3853 0.873 0.873 - - - - - obscurin-like 1 [Source:MGI Symbol;Acc:MGI:2138628]
41. Ska1 ENSMUSG00000036223 2078 0.873 0.873 - - - - - spindle and kinetochore associated complex subunit 1 [Source:MGI Symbol;Acc:MGI:1913718]
42. Amfr ENSMUSG00000031751 3890 0.872 0.872 - - - - - autocrine motility factor receptor [Source:MGI Symbol;Acc:MGI:1345634]
43. Etaa1 ENSMUSG00000016984 3070 0.872 0.872 - - - - - Ewing tumor-associated antigen 1 [Source:MGI Symbol;Acc:MGI:1915395]
44. Carhsp1 ENSMUSG00000008393 4797 0.872 0.872 - - - - - calcium regulated heat stable protein 1 [Source:MGI Symbol;Acc:MGI:1196368]
45. Midn ENSMUSG00000035621 7256 0.872 0.872 - - - - - midnolin [Source:MGI Symbol;Acc:MGI:1890222]
46. Ap2a2 ENSMUSG00000002957 2973 0.872 0.872 - - - - - adaptor-related protein complex 2, alpha 2 subunit [Source:MGI Symbol;Acc:MGI:101920]
47. Socs6 ENSMUSG00000056153 4730 0.871 0.871 - - - - - suppressor of cytokine signaling 6 [Source:MGI Symbol;Acc:MGI:1924885]
48. Dnajb11 ENSMUSG00000004460 1987 0.871 0.871 - - - - - DnaJ heat shock protein family (Hsp40) member B11 [Source:MGI Symbol;Acc:MGI:1915088]
49. Cdc27 ENSMUSG00000020687 3423 0.87 0.870 - - - - - cell division cycle 27 [Source:MGI Symbol;Acc:MGI:102685]
50. Rps2-ps13 ENSMUSG00000081684 3086 0.87 0.870 - - - - - ribosomal protein S2, pseudogene 13 [Source:MGI Symbol;Acc:MGI:3705640]
51. Ddx42 ENSMUSG00000020705 5329 0.869 0.869 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Source:MGI Symbol;Acc:MGI:1919297]
52. Ptpra ENSMUSG00000027303 1976 0.869 0.869 - - - - - protein tyrosine phosphatase, receptor type, A [Source:MGI Symbol;Acc:MGI:97808]
53. Asxl1 ENSMUSG00000042548 4358 0.868 0.868 - - - - - additional sex combs like 1 [Source:MGI Symbol;Acc:MGI:2684063]
54. Git1 ENSMUSG00000011877 5458 0.866 0.866 - - - - - G protein-coupled receptor kinase-interactor 1 [Source:MGI Symbol;Acc:MGI:1927140]
55. Smchd1 ENSMUSG00000024054 6835 0.865 0.865 - - - - - SMC hinge domain containing 1 [Source:MGI Symbol;Acc:MGI:1921605]
56. Tial1 ENSMUSG00000030846 5686 0.864 0.864 - - - - - Tia1 cytotoxic granule-associated RNA binding protein-like 1 [Source:MGI Symbol;Acc:MGI:107913]
57. Cnot4 ENSMUSG00000038784 2478 0.863 0.863 - - - - - CCR4-NOT transcription complex, subunit 4 [Source:MGI Symbol;Acc:MGI:1859026]
58. Pomp ENSMUSG00000029649 9539 0.863 0.863 - - - - - proteasome maturation protein [Source:MGI Symbol;Acc:MGI:1913787]
59. Sumo1 ENSMUSG00000026021 5835 0.862 0.862 - - - - - small ubiquitin-like modifier 1 [Source:MGI Symbol;Acc:MGI:1197010]
60. Csnk1g3 ENSMUSG00000073563 4431 0.862 0.862 - - - - - casein kinase 1, gamma 3 [Source:MGI Symbol;Acc:MGI:1917675]
61. Strap ENSMUSG00000030224 8577 0.859 0.859 - - - - - serine/threonine kinase receptor associated protein [Source:MGI Symbol;Acc:MGI:1329037]
62. Csrp2 ENSMUSG00000020186 5206 0.859 0.859 - - - - - cysteine and glycine-rich protein 2 [Source:MGI Symbol;Acc:MGI:1202907]
63. Map1s ENSMUSG00000019261 8221 0.856 0.856 - - - - - microtubule-associated protein 1S [Source:MGI Symbol;Acc:MGI:2443304]
64. Fmr1 ENSMUSG00000000838 3241 0.855 0.855 - - - - - fragile X mental retardation 1 [Source:MGI Symbol;Acc:MGI:95564]
65. Gpc1 ENSMUSG00000034220 3271 0.855 0.855 - - - - - glypican 1 [Source:MGI Symbol;Acc:MGI:1194891]
66. Ctnnd1 ENSMUSG00000034101 3830 0.853 0.853 - - - - - catenin (cadherin associated protein), delta 1 [Source:MGI Symbol;Acc:MGI:105100]
67. Zfp516 ENSMUSG00000058881 4181 0.853 0.853 - - - - - zinc finger protein 516 [Source:MGI Symbol;Acc:MGI:2443957]
68. Pls3 ENSMUSG00000016382 4114 0.852 0.852 - - - - - plastin 3 (T-isoform) [Source:MGI Symbol;Acc:MGI:104807]
69. Tle3 ENSMUSG00000032280 2626 0.849 0.849 - - - - - transducin-like enhancer of split 3 [Source:MGI Symbol;Acc:MGI:104634]
70. Kdm6b ENSMUSG00000018476 2226 0.848 0.848 - - - - - KDM1 lysine (K)-specific demethylase 6B [Source:MGI Symbol;Acc:MGI:2448492]
71. Ubn2 ENSMUSG00000038538 4483 0.848 0.848 - - - - - ubinuclein 2 [Source:MGI Symbol;Acc:MGI:2444236]
72. Fig4 ENSMUSG00000038417 1438 0.848 0.848 - - - - - FIG4 phosphoinositide 5-phosphatase [Source:MGI Symbol;Acc:MGI:2143585]
73. Ano6 ENSMUSG00000064210 5663 0.843 0.843 - - - - - anoctamin 6 [Source:MGI Symbol;Acc:MGI:2145890]
74. Pdia6 ENSMUSG00000020571 27161 0.843 0.843 - - - - - protein disulfide isomerase associated 6 [Source:MGI Symbol;Acc:MGI:1919103]
75. Capn6 ENSMUSG00000067276 10386 0.843 0.843 - - - - - calpain 6 [Source:MGI Symbol;Acc:MGI:1100850]
76. Ptprf ENSMUSG00000033295 8525 0.84 0.840 - - - - - protein tyrosine phosphatase, receptor type, F [Source:MGI Symbol;Acc:MGI:102695]
77. Tgfbr1 ENSMUSG00000007613 6961 0.839 0.839 - - - - - transforming growth factor, beta receptor I [Source:MGI Symbol;Acc:MGI:98728]
78. Cox7b ENSMUSG00000031231 9279 0.838 0.838 - - - - - cytochrome c oxidase subunit 7B [Source:MGI Symbol;Acc:MGI:1913392]
79. Prpf18 ENSMUSG00000039449 1985 0.835 0.835 - - - - - pre-mRNA processing factor 18 [Source:MGI Symbol;Acc:MGI:1914479]
80. Celf2 ENSMUSG00000002107 6599 0.834 0.834 - - - - - CUGBP, Elav-like family member 2 [Source:MGI Symbol;Acc:MGI:1338822]
81. 1110004F10Rik ENSMUSG00000030663 12284 0.83 0.830 - - - - - RIKEN cDNA 1110004F10 gene [Source:MGI Symbol;Acc:MGI:1929274]
82. Hjurp ENSMUSG00000044783 15461 0.829 0.829 - - - - - Holliday junction recognition protein [Source:MGI Symbol;Acc:MGI:2685821]
83. Dnmt3a ENSMUSG00000020661 12032 0.823 0.823 - - - - - DNA methyltransferase 3A [Source:MGI Symbol;Acc:MGI:1261827]
84. Rps3 ENSMUSG00000030744 19581 0.822 0.822 - - - - - ribosomal protein S3 [Source:MGI Symbol;Acc:MGI:1350917]
85. Vdac2 ENSMUSG00000021771 16679 0.811 0.811 - - - - - voltage-dependent anion channel 2 [Source:MGI Symbol;Acc:MGI:106915]
86. Tubb5 ENSMUSG00000001525 119280 0.809 0.809 - - - - - tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
87. Fkbp9 ENSMUSG00000029781 4106 0.804 0.804 - - - - - FK506 binding protein 9 [Source:MGI Symbol;Acc:MGI:1350921]
88. Slc25a39 ENSMUSG00000018677 15989 0.801 0.801 - - - - - solute carrier family 25, member 39 [Source:MGI Symbol;Acc:MGI:1196386]
89. Cks2 ENSMUSG00000062248 15997 0.797 0.797 - - - - - CDC28 protein kinase regulatory subunit 2 [Source:MGI Symbol;Acc:MGI:1913447]
90. Arid3a ENSMUSG00000019564 2116 0.795 0.795 - - - - - AT rich interactive domain 3A (BRIGHT-like) [Source:MGI Symbol;Acc:MGI:1328360]
91. Rpn2 ENSMUSG00000027642 6429 0.795 0.795 - - - - - ribophorin II [Source:MGI Symbol;Acc:MGI:98085]
92. 2410002F23Rik ENSMUSG00000045411 3068 0.794 0.794 - - - - - RIKEN cDNA 2410002F23 gene [Source:MGI Symbol;Acc:MGI:1914226]
93. Gpx4 ENSMUSG00000075706 9477 0.791 0.791 - - - - - glutathione peroxidase 4 [Source:MGI Symbol;Acc:MGI:104767]
94. Cse1l ENSMUSG00000002718 18850 0.791 0.791 - - - - - chromosome segregation 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1339951]
95. Gnb2l1 Gnb2l1 29866 0.791 0.791 - - - - -
96. mt-Atp8 ENSMUSG00000064356 13180 0.788 0.788 - - - - - mitochondrially encoded ATP synthase 8 [Source:MGI Symbol;Acc:MGI:99926]
97. Sepw1 14985 0.779 0.779 - - - - - selenoprotein W, muscle 1
98. Slbp ENSMUSG00000004642 12587 0.779 0.779 - - - - - stem-loop binding protein [Source:MGI Symbol;Acc:MGI:108402]
99. Nono ENSMUSG00000031311 20036 0.777 0.777 - - - - - non-POU-domain-containing, octamer binding protein [Source:MGI Symbol;Acc:MGI:1855692]
100. Ddx19a ENSMUSG00000015023 3351 0.776 0.776 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a [Source:MGI Symbol;Acc:MGI:99526]

There are 28 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA