Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Col9a3

Gene Name Gene ID Reads Annotation
Col9a3 ENSMUSG00000027570 98 collagen, type IX, alpha 3 [Source:MGI Symbol;Acc:MGI:894686]







Genes with expression patterns similar to Col9a3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col9a3 ENSMUSG00000027570 98 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type IX, alpha 3 [Source:MGI Symbol;Acc:MGI:894686]
2. Irs3 ENSMUSG00000047182 11 1.818 - 0.962 0.856 - - - insulin receptor substrate 3 [Source:MGI Symbol;Acc:MGI:1194882]
3. 5930422O12Rik ENSMUSG00000048544 74 1.715 - 0.947 0.768 - - - RIKEN cDNA 5930422O12 gene [Source:MGI Symbol;Acc:MGI:2442538]
4. C030013C21Rik ENSMUSG00000085078 24 0.966 - 0.966 - - - - RIKEN cDNA C030013C21 gene [Source:MGI Symbol;Acc:MGI:1924667]
5. Il1r2 ENSMUSG00000026073 26 0.963 - 0.963 - - - - interleukin 1 receptor, type II [Source:MGI Symbol;Acc:MGI:96546]
6. Gm16020 ENSMUSG00000072576 11 0.962 - 0.962 - - - - predicted gene 16020 [Source:MGI Symbol;Acc:MGI:3801865]
7. Gm12367 ENSMUSG00000084828 11 0.962 - 0.962 - - - - predicted gene 12367 [Source:MGI Symbol;Acc:MGI:3649554]
8. 9130230N09Rik ENSMUSG00000092626 12 0.962 - 0.962 - - - - RIKEN cDNA 9130230N09 gene [Source:MGI Symbol;Acc:MGI:1924921]
9. Prl2c1 ENSMUSG00000062551 9 0.962 - 0.962 - - - - Prolactin family 2, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:3649927]
10. Gm17108 ENSMUSG00000091133 29 0.961 - 0.961 - - - - predicted gene 17108 [Source:MGI Symbol;Acc:MGI:4937935]
11. Gm12198 ENSMUSG00000085564 18 0.96 - 0.960 - - - - predicted gene 12198 [Source:MGI Symbol;Acc:MGI:3650407]
12. 1810062O18Rik ENSMUSG00000084925 34 0.959 - 0.959 - - - - RIKEN cDNA 1810062O18 gene [Source:MGI Symbol;Acc:MGI:1922852]
13. Gm10736 ENSMUSG00000096842 39 0.958 - 0.958 - - - - predicted gene 10736 [Source:MGI Symbol;Acc:MGI:3704412]
14. Gm10155 ENSMUSG00000066180 21 0.955 - 0.955 - - - - predicted gene 10155 [Source:MGI Symbol;Acc:MGI:3642914]
15. Stap1 ENSMUSG00000029254 13 0.953 - 0.953 - - - - signal transducing adaptor family member 1 [Source:MGI Symbol;Acc:MGI:1926193]
16. Myo1f ENSMUSG00000024300 181 0.952 - 0.952 - - - - myosin IF [Source:MGI Symbol;Acc:MGI:107711]
17. Gm2026 ENSMUSG00000078886 27 0.952 - 0.952 - - - - predicted gene 2026 [Source:MGI Symbol;Acc:MGI:3780195]
18. 1700016K19Rik ENSMUSG00000053783 24 0.95 - 0.950 - - - - RIKEN cDNA 1700016K19 gene [Source:MGI Symbol;Acc:MGI:1921480]
19. St14 ENSMUSG00000031995 31 0.945 - 0.945 - - - - suppression of tumorigenicity 14 (colon carcinoma) [Source:MGI Symbol;Acc:MGI:1338881]
20. MIMT1 MIMT1 23 0.944 - 0.944 - - - -
21. 6030443J06Rik ENSMUSG00000097207 38 0.944 - 0.944 - - - - RIKEN cDNA 6030443J06 gene [Source:MGI Symbol;Acc:MGI:2444595]
22. 1700026L06Rik 1700026L06Rik 37 0.944 - 0.944 - - - -
23. Gm22767 ENSMUSG00000088990 25 0.942 - 0.942 - - - - predicted gene, 22767 [Source:MGI Symbol;Acc:MGI:5452544]
24. Gm12577 ENSMUSG00000083834 78 0.941 - 0.941 - - - - predicted gene 12577 [Source:MGI Symbol;Acc:MGI:3651713]
25. Gm22 71 0.938 - 0.938 - - - - predicted gene 22, transcript variant X1
26. 2310007B03Rik ENSMUSG00000034159 31 0.937 - 0.937 - - - - RIKEN cDNA 2310007B03 gene [Source:MGI Symbol;Acc:MGI:1919124]
27. Pcdh10 ENSMUSG00000049100 172 0.934 - 0.934 - - - - protocadherin 10 [Source:MGI Symbol;Acc:MGI:1338042]
28. Zfp956 ENSMUSG00000045466 81 0.933 - 0.933 - - - - zinc finger protein 956 [Source:MGI Symbol;Acc:MGI:2141515]
29. Gm25776 ENSMUSG00000080365 59 0.933 - 0.933 - - - - predicted gene, 25776 [Source:MGI Symbol;Acc:MGI:5455553]
30. Tomm6 ENSMUSG00000033475 42 0.932 - 0.932 - - - - translocase of outer mitochondrial membrane 6 [Source:MGI Symbol;Acc:MGI:1913369]
31. AA474331 AA474331 111 0.932 - 0.932 - - - -
32. Hoxd11 ENSMUSG00000042499 16 0.932 - 0.932 - - - - homeobox D11 [Source:MGI Symbol;Acc:MGI:96203]
33. Gm12657 ENSMUSG00000063314 79 0.931 - 0.931 - - - - predicted gene 12657 [Source:MGI Symbol;Acc:MGI:3651714]
34. Gfod1 ENSMUSG00000051335 46 0.93 - 0.930 - - - - glucose-fructose oxidoreductase domain containing 1 [Source:MGI Symbol;Acc:MGI:2145304]
35. Gm16907 ENSMUSG00000097242 72 0.93 - 0.930 - - - - predicted gene, 16907 [Source:MGI Symbol;Acc:MGI:4439831]
36. Kctd10 ENSMUSG00000001098 136 0.928 - 0.928 - - - - potassium channel tetramerisation domain containing 10 [Source:MGI Symbol;Acc:MGI:2141207]
37. Nipal2 ENSMUSG00000038879 37 0.927 - 0.927 - - - - NIPA-like domain containing 2 [Source:MGI Symbol;Acc:MGI:1924488]
38. 1700112E06Rik 52 0.926 - 0.926 - - - - RIKEN cDNA 1700112E06 gene, transcript variant X4
39. Gm8129 ENSMUSG00000059159 76 0.923 - 0.923 - - - - predicted pseudogene 8129 [Source:MGI Symbol;Acc:MGI:3646863]
40. Cacnb2 ENSMUSG00000057914 107 0.922 - 0.922 - - - - calcium channel, voltage-dependent, beta 2 subunit [Source:MGI Symbol;Acc:MGI:894644]
41. Mitf ENSMUSG00000035158 96 0.919 - 0.919 - - - - melanogenesis associated transcription factor [Source:MGI Symbol;Acc:MGI:104554]
42. Mocs3 ENSMUSG00000074576 94 0.913 - 0.913 - - - - molybdenum cofactor synthesis 3 [Source:MGI Symbol;Acc:MGI:1916622]
43. Gm15401 ENSMUSG00000072999 54 0.912 - 0.912 - - - - predicted gene 15401 [Source:MGI Symbol;Acc:MGI:3642201]
44. Gm5595 249 0.912 - 0.912 - - - - predicted gene 5595
45. Rspo1 ENSMUSG00000028871 365 0.911 - 0.911 - - - - R-spondin 1 [Source:MGI Symbol;Acc:MGI:2183426]
46. Hist2h2be ENSMUSG00000068854 501 0.91 - 0.910 - - - - histone cluster 2, H2be [Source:MGI Symbol;Acc:MGI:2448415]
47. Samd15 ENSMUSG00000090812 66 0.91 - 0.910 - - - - sterile alpha motif domain containing 15 [Source:MGI Symbol;Acc:MGI:2685109]
48. Ak5 ENSMUSG00000039058 89 0.908 - 0.908 - - - - adenylate kinase 5 [Source:MGI Symbol;Acc:MGI:2677491]
49. Col8a2 ENSMUSG00000056174 221 0.905 - 0.905 - - - - collagen, type VIII, alpha 2 [Source:MGI Symbol;Acc:MGI:88464]
50. Rpl35 ENSMUSG00000062997 54 0.904 - 0.904 - - - - ribosomal protein L35 [Source:MGI Symbol;Acc:MGI:1913739]
51. Ncoa4 ENSMUSG00000056234 40 0.904 - 0.904 - - - - nuclear receptor coactivator 4 [Source:MGI Symbol;Acc:MGI:1350932]
52. Bace2 ENSMUSG00000040605 132 0.901 - 0.901 - - - - beta-site APP-cleaving enzyme 2 [Source:MGI Symbol;Acc:MGI:1860440]
53. Msh5 ENSMUSG00000007035 89 0.9 - 0.900 - - - - mutS homolog 5 [Source:MGI Symbol;Acc:MGI:1329021]
54. Rpl30-ps3 ENSMUSG00000080873 111 0.9 - 0.900 - - - - ribosomal protein L30, pseudogene 3 [Source:MGI Symbol;Acc:MGI:1321401]
55. Fgf10 ENSMUSG00000021732 520 0.897 - 0.897 - - - - fibroblast growth factor 10 [Source:MGI Symbol;Acc:MGI:1099809]
56. Gm24187 ENSMUSG00000088609 210 0.892 - 0.892 - - - - predicted gene, 24187 [Source:MGI Symbol;Acc:MGI:5453964]
57. Bin2 ENSMUSG00000098112 317 0.892 - 0.892 - - - - bridging integrator 2 [Source:MGI Symbol;Acc:MGI:3611448]
58. Pate2 ENSMUSG00000074452 74 0.887 - 0.887 - - - - prostate and testis expressed 2 [Source:MGI Symbol;Acc:MGI:2685692]
59. Gm14696 ENSMUSG00000087369 10 0.887 - - 0.887 - - - predicted gene 14696 [Source:MGI Symbol;Acc:MGI:3705257]
60. Zfp651 ENSMUSG00000013419 866 0.887 - 0.887 - - - - zinc finger protein 651 [Source:MGI Symbol;Acc:MGI:2670992]
61. Tuba4a ENSMUSG00000026202 250 0.882 - 0.882 - - - - tubulin, alpha 4A [Source:MGI Symbol;Acc:MGI:1095410]
62. Gm16221 ENSMUSG00000082234 99 0.882 - 0.882 - - - - predicted gene 16221 [Source:MGI Symbol;Acc:MGI:3802147]
63. Ribc1 ENSMUSG00000025257 87 0.88 - 0.880 - - - - RIB43A domain with coiled-coils 1 [Source:MGI Symbol;Acc:MGI:1913861]
64. Zfp354b ENSMUSG00000020335 56 0.88 - - 0.880 - - - zinc finger protein 354B [Source:MGI Symbol;Acc:MGI:1351476]
65. Rnf207 ENSMUSG00000058498 72 0.879 - - 0.879 - - - ring finger protein 207 [Source:MGI Symbol;Acc:MGI:2684989]
66. Pnpo ENSMUSG00000018659 322 0.87 - 0.870 - - - - pyridoxine 5'-phosphate oxidase [Source:MGI Symbol;Acc:MGI:2144151]
67. Zfat ENSMUSG00000022335 160 0.87 - 0.870 - - - - zinc finger and AT hook domain containing [Source:MGI Symbol;Acc:MGI:2681865]
68. Gm9006 ENSMUSG00000079359 77 0.869 - 0.869 - - - - predicted gene 9006 [Source:MGI Symbol;Acc:MGI:3644004]
69. Gm13236 ENSMUSG00000087513 9 0.868 - - 0.868 - - - predicted gene 13236 [Source:MGI Symbol;Acc:MGI:3705163]
70. Cebpb ENSMUSG00000056501 245 0.868 - 0.868 - - - - CCAAT/enhancer binding protein (C/EBP), beta [Source:MGI Symbol;Acc:MGI:88373]
71. Serpind1 ENSMUSG00000022766 52 0.867 - - 0.867 - - - serine (or cysteine) peptidase inhibitor, clade D, member 1 [Source:MGI Symbol;Acc:MGI:96051]
72. Gm12591 ENSMUSG00000082831 8 0.867 - - 0.867 - - - predicted gene 12591 [Source:MGI Symbol;Acc:MGI:3649887]
73. Gm684 50 0.866 - - 0.866 - - - predicted gene 684, transcript variant X5
74. Lrwd1 ENSMUSG00000029703 543 0.866 - 0.866 - - - - leucine-rich repeats and WD repeat domain containing 1 [Source:MGI Symbol;Acc:MGI:1918985]
75. Grin2d ENSMUSG00000002771 119 0.865 - 0.865 - - - - glutamate receptor, ionotropic, NMDA2D (epsilon 4) [Source:MGI Symbol;Acc:MGI:95823]
76. Gm6787 ENSMUSG00000086404 13 0.865 - - 0.865 - - - predicted gene 6787 [Source:MGI Symbol;Acc:MGI:3646481]
77. Sfxn3 ENSMUSG00000025212 825 0.864 - 0.864 - - - - sideroflexin 3 [Source:MGI Symbol;Acc:MGI:2137679]
78. Zfp853 ENSMUSG00000093910 3 0.863 - - 0.863 - - - zinc finger protein 853 [Source:MGI Symbol;Acc:MGI:2685638]
79. Gm26862 ENSMUSG00000097644 5 0.863 - - 0.863 - - - predicted gene, 26862 [Source:MGI Symbol;Acc:MGI:5477356]
80. Zfp472 ENSMUSG00000053600 248 0.862 - 0.862 - - - - zinc finger protein 472 [Source:MGI Symbol;Acc:MGI:2385049]
81. 4930426L09Rik ENSMUSG00000026736 4 0.861 - - 0.861 - - - RIKEN cDNA 4930426L09 gene [Source:MGI Symbol;Acc:MGI:1921879]
82. Col17a1 ENSMUSG00000025064 11 0.859 - - 0.859 - - - collagen, type XVII, alpha 1 [Source:MGI Symbol;Acc:MGI:88450]
83. Gm14325 ENSMUSG00000095362 531 0.858 - 0.858 - - - - predicted gene 14325 [Source:MGI Symbol;Acc:MGI:3702875]
84. Gpr179 ENSMUSG00000070337 20 0.858 - - 0.858 - - - G protein-coupled receptor 179 [Source:MGI Symbol;Acc:MGI:2443409]
85. Gm14947 ENSMUSG00000086452 16 0.857 - - 0.857 - - - predicted gene 14947 [Source:MGI Symbol;Acc:MGI:3642731]
86. Krtap5-4 ENSMUSG00000045236 2 0.857 - - 0.857 - - - keratin associated protein 5-4 [Source:MGI Symbol;Acc:MGI:1354758]
87. Fbxl7 ENSMUSG00000043556 38 0.857 - - 0.857 - - - F-box and leucine-rich repeat protein 7 [Source:MGI Symbol;Acc:MGI:3052506]
88. Gm6169 ENSMUSG00000057762 16 0.857 - - 0.857 - - - predicted gene 6169 [Source:MGI Symbol;Acc:MGI:3646298]
89. Afp ENSMUSG00000054932 3253 0.857 - - 0.857 - - - alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
90. Crygd ENSMUSG00000067299 3 0.857 - - 0.857 - - - crystallin, gamma D [Source:MGI Symbol;Acc:MGI:88524]
91. Cyp2c70 ENSMUSG00000060613 3 0.857 - - 0.857 - - - cytochrome P450, family 2, subfamily c, polypeptide 70 [Source:MGI Symbol;Acc:MGI:2385878]
92. C3 ENSMUSG00000024164 24 0.857 - - 0.857 - - - complement component 3 [Source:MGI Symbol;Acc:MGI:88227]
93. Gm16028 ENSMUSG00000090252 4 0.857 - - 0.857 - - - predicted gene 16028 [Source:MGI Symbol;Acc:MGI:3801982]
94. Fbxo24 ENSMUSG00000089984 6 0.857 - - 0.857 - - - F-box protein 24 [Source:MGI Symbol;Acc:MGI:1918426]
95. Mesp1 ENSMUSG00000030544 3 0.857 - - 0.857 - - - mesoderm posterior 1 [Source:MGI Symbol;Acc:MGI:107785]
96. Alb ENSMUSG00000029368 370 0.857 - - 0.857 - - - albumin [Source:MGI Symbol;Acc:MGI:87991]
97. Gm16542 Gm16542 2 0.857 - - 0.857 - - -
98. Olfr1505 ENSMUSG00000062314 2 0.857 - - 0.857 - - - olfactory receptor 1505 [Source:MGI Symbol;Acc:MGI:3031339]
99. Rtl1 ENSMUSG00000085925, ENSMUSG00000098639 15 0.857 - - 0.857 - - - retrotransposon Gaglike 1 [Source:MGI Symbol;Acc:MGI:2656842]
100. Fam46d 4 0.857 - - 0.857 - - - family with sequence similarity 46, member D, transcript variant X1

There are 205 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA