Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Col9a2

Gene Name Gene ID Reads Annotation
Col9a2 ENSMUSG00000028626 672 collagen, type IX, alpha 2 [Source:MGI Symbol;Acc:MGI:88466]







Genes with expression patterns similar to Col9a2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col9a2 ENSMUSG00000028626 672 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type IX, alpha 2 [Source:MGI Symbol;Acc:MGI:88466]
2. 1110020A21Rik ENSMUSG00000097047 49 0.919 0.919 - - - - - RIKEN cDNA 1110020A21 gene [Source:MGI Symbol;Acc:MGI:1915781]
3. E430024P14Rik ENSMUSG00000090069 38 0.896 0.896 - - - - - RIKEN cDNA E430024P14 gene [Source:MGI Symbol;Acc:MGI:2445079]
4. Vgll1 ENSMUSG00000031131 10 0.896 0.896 - - - - - vestigial like family member 1 [Source:MGI Symbol;Acc:MGI:2655768]
5. Snora75 ENSMUSG00000064837 33 0.895 0.895 - - - - - small nucleolar RNA, H/ACA box 75 [Source:MGI Symbol;Acc:MGI:3819511]
6. Tmem170 ENSMUSG00000031953 67 0.894 0.894 - - - - - transmembrane protein 170 [Source:MGI Symbol;Acc:MGI:106426]
7. Gm14813 ENSMUSG00000082549 69 0.888 0.888 - - - - - predicted gene 14813 [Source:MGI Symbol;Acc:MGI:3705714]
8. Gm11392 ENSMUSG00000097931 7 0.886 0.886 - - - - - predicted gene 11392 [Source:MGI Symbol;Acc:MGI:3649835]
9. Gm13657 ENSMUSG00000086813 15 0.886 0.886 - - - - - predicted gene 13657 [Source:MGI Symbol;Acc:MGI:3650031]
10. Gm6378 ENSMUSG00000062962 7 0.886 0.886 - - - - - predicted pseudogene 6378 [Source:MGI Symbol;Acc:MGI:3647253]
11. Gm9967 ENSMUSG00000055323 7 0.886 0.886 - - - - - predicted gene 9967 [Source:MGI Symbol;Acc:MGI:3704300]
12. Cpne4 ENSMUSG00000032564 37 0.884 0.884 - - - - - copine IV [Source:MGI Symbol;Acc:MGI:1921270]
13. Tlr1 ENSMUSG00000044827 9 0.883 0.883 - - - - - toll-like receptor 1 [Source:MGI Symbol;Acc:MGI:1341295]
14. Hps6 ENSMUSG00000074811 74 0.883 0.883 - - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:MGI Symbol;Acc:MGI:2181763]
15. Bace2 ENSMUSG00000040605 132 0.882 - 0.882 - - - - beta-site APP-cleaving enzyme 2 [Source:MGI Symbol;Acc:MGI:1860440]
16. Snx11 ENSMUSG00000020876 41 0.879 0.879 - - - - - sorting nexin 11 [Source:MGI Symbol;Acc:MGI:1921729]
17. Tmem215 ENSMUSG00000046593 29 0.879 0.879 - - - - - transmembrane protein 215 [Source:MGI Symbol;Acc:MGI:2444167]
18. 1700019G17Rik 1700019G17Rik 54 0.872 0.872 - - - - -
19. Kcna6 ENSMUSG00000038077 132 0.872 - 0.872 - - - - potassium voltage-gated channel, shaker-related, subfamily, member 6 [Source:MGI Symbol;Acc:MGI:96663]
20. Dyrk1b ENSMUSG00000002409 201 0.87 0.870 - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b [Source:MGI Symbol;Acc:MGI:1330302]
21. Ficd ENSMUSG00000053334 130 0.87 0.870 - - - - - FIC domain containing [Source:MGI Symbol;Acc:MGI:1098550]
22. Map3k6 ENSMUSG00000028862 50 0.867 0.867 - - - - - mitogen-activated protein kinase kinase kinase 6 [Source:MGI Symbol;Acc:MGI:1855691]
23. Itga5 ENSMUSG00000000555 28 0.866 0.866 - - - - - integrin alpha 5 (fibronectin receptor alpha) [Source:MGI Symbol;Acc:MGI:96604]
24. Krt20 ENSMUSG00000035775 230 0.865 - 0.865 - - - - keratin 20 [Source:MGI Symbol;Acc:MGI:1914059]
25. Prdm10 ENSMUSG00000042496 118 0.865 0.865 - - - - - PR domain containing 10 [Source:MGI Symbol;Acc:MGI:2682952]
26. Slc5a4b ENSMUSG00000020226 35 0.864 0.864 - - - - - solute carrier family 5 (neutral amino acid transporters, system A), member 4b [Source:MGI Symbol;Acc:MGI:1890478]
27. Fgf18 ENSMUSG00000057967 46 0.863 0.863 - - - - - fibroblast growth factor 18 [Source:MGI Symbol;Acc:MGI:1277980]
28. Atp8b2 ENSMUSG00000060671 375 0.861 - 0.861 - - - - ATPase, class I, type 8B, member 2 [Source:MGI Symbol;Acc:MGI:1859660]
29. Pias3 ENSMUSG00000028101 1756 0.86 - 0.860 - - - - protein inhibitor of activated STAT 3 [Source:MGI Symbol;Acc:MGI:1913126]
30. Tax1bp3 ENSMUSG00000040158 23 0.857 0.857 - - - - - Tax1 (human T cell leukemia virus type I) binding protein 3 [Source:MGI Symbol;Acc:MGI:1923531]
31. Gm10226 ENSMUSG00000067929 43 0.857 0.857 - - - - - predicted gene 10226 [Source:MGI Symbol;Acc:MGI:3704470]
32. Enpp1 ENSMUSG00000037370 109 0.856 0.856 - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:MGI Symbol;Acc:MGI:97370]
33. Fam189a2 ENSMUSG00000071604 71 0.856 0.856 - - - - - family with sequence similarity 189, member A2 [Source:MGI Symbol;Acc:MGI:2685813]
34. Ephx1 ENSMUSG00000038776 79 0.852 0.852 - - - - - epoxide hydrolase 1, microsomal [Source:MGI Symbol;Acc:MGI:95405]
35. Maats1 ENSMUSG00000022805 60 0.852 0.852 - - - - - MYCBP-associated, testis expressed 1 [Source:MGI Symbol;Acc:MGI:2443598]
36. Jdp2 ENSMUSG00000034271 175 0.847 0.847 - - - - - Jun dimerization protein 2 [Source:MGI Symbol;Acc:MGI:1932093]
37. Tmem63a ENSMUSG00000026519 90 0.847 0.847 - - - - - transmembrane protein 63a [Source:MGI Symbol;Acc:MGI:2384789]
38. Msh5 ENSMUSG00000007035 89 0.843 - 0.843 - - - - mutS homolog 5 [Source:MGI Symbol;Acc:MGI:1329021]
39. Gm7452 ENSMUSG00000107310 296 0.843 0.843 - - - - - predicted pseudogene 7452 [Source:MGI Symbol;Acc:MGI:3645151]
40. Rspo1 ENSMUSG00000028871 365 0.842 - 0.842 - - - - R-spondin 1 [Source:MGI Symbol;Acc:MGI:2183426]
41. Vps11 ENSMUSG00000032127 317 0.84 0.840 - - - - - VPS11, CORVET/HOPS core subunit [Source:MGI Symbol;Acc:MGI:1918982]
42. Rora ENSMUSG00000032238 241 0.834 0.834 - - - - - RAR-related orphan receptor alpha [Source:MGI Symbol;Acc:MGI:104661]
43. Tmem69 ENSMUSG00000055900 851 0.834 0.834 - - - - - transmembrane protein 69 [Source:MGI Symbol;Acc:MGI:3045357]
44. Prkar1b ENSMUSG00000025855 360 0.833 0.833 - - - - - protein kinase, cAMP dependent regulatory, type I beta [Source:MGI Symbol;Acc:MGI:97759]
45. Acer3 ENSMUSG00000030760 598 0.833 0.833 - - - - - alkaline ceramidase 3 [Source:MGI Symbol;Acc:MGI:1913440]
46. Fam228a ENSMUSG00000079177 14 0.83 0.830 - - - - - family with sequence similarity 228, member A [Source:MGI Symbol;Acc:MGI:1922105]
47. Vti1a ENSMUSG00000024983 189 0.828 0.828 - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:MGI Symbol;Acc:MGI:1855699]
48. Tmem150a ENSMUSG00000055912, ENSMUSG00000102455 471 0.824 - 0.824 - - - - transmembrane protein 150A [Source:MGI Symbol;Acc:MGI:2385244]
49. Gm24576 ENSMUSG00000093249 66 0.823 0.823 - - - - - predicted gene, 24576 [Source:MGI Symbol;Acc:MGI:5454353]
50. Asz1 ENSMUSG00000010796 17 0.822 0.822 - - - - - ankyrin repeat, SAM and basic leucine zipper domain containing 1 [Source:MGI Symbol;Acc:MGI:1921318]
51. Chpf2 ENSMUSG00000038181 62 0.822 0.822 - - - - - chondroitin polymerizing factor 2 [Source:MGI Symbol;Acc:MGI:1917522]
52. Col16a1 ENSMUSG00000040690 371 0.818 0.818 - - - - - collagen, type XVI, alpha 1 [Source:MGI Symbol;Acc:MGI:1095396]
53. Hist1h2ai ENSMUSG00000071516 101 0.816 0.816 - - - - - histone cluster 1, H2ai [Source:MGI Symbol;Acc:MGI:2448457]
54. Dusp14 ENSMUSG00000018648 212 0.814 0.814 - - - - - dual specificity phosphatase 14 [Source:MGI Symbol;Acc:MGI:1927168]
55. Sec22c ENSMUSG00000061536 764 0.813 0.813 - - - - - SEC22 homolog C, vesicle trafficking protein [Source:MGI Symbol;Acc:MGI:2447871]
56. Rcor3 ENSMUSG00000037395, ENSMUSG00000111452 448 0.813 - 0.813 - - - - REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441920]
57. Fam83a ENSMUSG00000051225, ENSMUSG00000116387 119 0.813 0.813 - - - - - family with sequence similarity 83, member A [Source:MGI Symbol;Acc:MGI:2447773]
58. Hyal3 ENSMUSG00000036091 127 0.813 0.813 - - - - - hyaluronoglucosaminidase 3 [Source:MGI Symbol;Acc:MGI:1330288]
59. Map7 ENSMUSG00000019996 135 0.811 0.811 - - - - - microtubule-associated protein 7 [Source:MGI Symbol;Acc:MGI:1328328]
60. Slc17a5 ENSMUSG00000049624 246 0.81 0.810 - - - - - solute carrier family 17 (anion/sugar transporter), member 5 [Source:MGI Symbol;Acc:MGI:1924105]
61. Bmp1 ENSMUSG00000022098 699 0.809 0.809 - - - - - bone morphogenetic protein 1 [Source:MGI Symbol;Acc:MGI:88176]
62. 2310007B03Rik ENSMUSG00000034159 31 0.805 - 0.805 - - - - RIKEN cDNA 2310007B03 gene [Source:MGI Symbol;Acc:MGI:1919124]
63. Rem2 ENSMUSG00000022176 171 0.805 0.805 - - - - - rad and gem related GTP binding protein 2 [Source:MGI Symbol;Acc:MGI:2155260]
64. BC034090 ENSMUSG00000033722 148 0.804 0.804 - - - - - cDNA sequence BC034090 [Source:MGI Symbol;Acc:MGI:2672904]
65. Pcdh10 ENSMUSG00000049100 172 0.803 - 0.803 - - - - protocadherin 10 [Source:MGI Symbol;Acc:MGI:1338042]
66. Gabra1 ENSMUSG00000010803 177 0.8 0.800 - - - - - gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 [Source:MGI Symbol;Acc:MGI:95613]
67. Helq ENSMUSG00000035266 104 0.8 0.800 - - - - - helicase, POLQ-like [Source:MGI Symbol;Acc:MGI:2176740]
68. Gm22 71 0.8 - 0.800 - - - - predicted gene 22, transcript variant X1
69. Angel1 ENSMUSG00000021257 191 0.8 0.800 - - - - - angel homolog 1 [Source:MGI Symbol;Acc:MGI:1915987]
70. Hoxd11 ENSMUSG00000042499 16 0.799 - 0.799 - - - - homeobox D11 [Source:MGI Symbol;Acc:MGI:96203]
71. Gm6222 ENSMUSG00000083019 145 0.799 0.799 - - - - - predicted pseudogene 6222 [Source:MGI Symbol;Acc:MGI:3648722]
72. Ap1s3 ENSMUSG00000054702 166 0.799 0.799 - - - - - adaptor-related protein complex AP-1, sigma 3 [Source:MGI Symbol;Acc:MGI:1891304]
73. Gimap9 ENSMUSG00000051124 246 0.798 0.798 - - - - - GTPase, IMAP family member 9 [Source:MGI Symbol;Acc:MGI:3511744]
74. Pnpo ENSMUSG00000018659 322 0.798 - 0.798 - - - - pyridoxine 5'-phosphate oxidase [Source:MGI Symbol;Acc:MGI:2144151]
75. 1700016K19Rik ENSMUSG00000053783 24 0.797 - 0.797 - - - - RIKEN cDNA 1700016K19 gene [Source:MGI Symbol;Acc:MGI:1921480]
76. Dand5 ENSMUSG00000053226 128 0.797 0.797 - - - - - DAN domain family member 5, BMP antagonist [Source:MGI Symbol;Acc:MGI:1344365]
77. A730071L15Rik ENSMUSG00000096923 22 0.797 0.797 - - - - - RIKEN cDNA A730071L15Rik gene [Source:MGI Symbol;Acc:MGI:3642498]
78. Mapk13 ENSMUSG00000004864 123 0.797 0.797 - - - - - mitogen-activated protein kinase 13 [Source:MGI Symbol;Acc:MGI:1346864]
79. Gm26590 ENSMUSG00000097533 53 0.796 0.796 - - - - - predicted gene, 26590 [Source:MGI Symbol;Acc:MGI:5477084]
80. AA474331 AA474331 111 0.795 - 0.795 - - - -
81. Nudt2 ENSMUSG00000028443 698 0.794 0.794 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:MGI Symbol;Acc:MGI:1913651]
82. Irs3 ENSMUSG00000047182 11 0.793 - 0.793 - - - - insulin receptor substrate 3 [Source:MGI Symbol;Acc:MGI:1194882]
83. Prl2c1 ENSMUSG00000062551 9 0.793 - 0.793 - - - - Prolactin family 2, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:3649927]
84. 6030443J06Rik ENSMUSG00000097207 38 0.793 - 0.793 - - - - RIKEN cDNA 6030443J06 gene [Source:MGI Symbol;Acc:MGI:2444595]
85. Klhl3 ENSMUSG00000014164 43 0.793 0.793 - - - - - kelch-like 3 [Source:MGI Symbol;Acc:MGI:2445185]
86. 9130230N09Rik ENSMUSG00000092626 12 0.793 - 0.793 - - - - RIKEN cDNA 9130230N09 gene [Source:MGI Symbol;Acc:MGI:1924921]
87. Gm12367 ENSMUSG00000084828 11 0.793 - 0.793 - - - - predicted gene 12367 [Source:MGI Symbol;Acc:MGI:3649554]
88. 1700026L06Rik 1700026L06Rik 37 0.793 - 0.793 - - - -
89. Gm16020 ENSMUSG00000072576 11 0.793 - 0.793 - - - - predicted gene 16020 [Source:MGI Symbol;Acc:MGI:3801865]
90. Il1r2 ENSMUSG00000026073 26 0.792 - 0.792 - - - - interleukin 1 receptor, type II [Source:MGI Symbol;Acc:MGI:96546]
91. Mitf ENSMUSG00000035158 96 0.791 - 0.791 - - - - melanogenesis associated transcription factor [Source:MGI Symbol;Acc:MGI:104554]
92. Gm12198 ENSMUSG00000085564 18 0.79 - 0.790 - - - - predicted gene 12198 [Source:MGI Symbol;Acc:MGI:3650407]
93. Ankrd13d ENSMUSG00000005986 96 0.79 0.790 - - - - - ankyrin repeat domain 13 family, member D [Source:MGI Symbol;Acc:MGI:1915673]
94. St14 ENSMUSG00000031995 31 0.789 - 0.789 - - - - suppression of tumorigenicity 14 (colon carcinoma) [Source:MGI Symbol;Acc:MGI:1338881]
95. Gm17108 ENSMUSG00000091133 29 0.789 - 0.789 - - - - predicted gene 17108 [Source:MGI Symbol;Acc:MGI:4937935]
96. C030013C21Rik ENSMUSG00000085078 24 0.789 - 0.789 - - - - RIKEN cDNA C030013C21 gene [Source:MGI Symbol;Acc:MGI:1924667]
97. 1810062O18Rik ENSMUSG00000084925 34 0.788 - 0.788 - - - - RIKEN cDNA 1810062O18 gene [Source:MGI Symbol;Acc:MGI:1922852]
98. Gm10736 ENSMUSG00000096842 39 0.786 - 0.786 - - - - predicted gene 10736 [Source:MGI Symbol;Acc:MGI:3704412]
99. Lbp ENSMUSG00000016024 157 0.785 0.785 - - - - - lipopolysaccharide binding protein [Source:MGI Symbol;Acc:MGI:1098776]
100. Cebpb ENSMUSG00000056501 245 0.785 - 0.785 - - - - CCAAT/enhancer binding protein (C/EBP), beta [Source:MGI Symbol;Acc:MGI:88373]

There are 139 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA