Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Col7a1

Gene Name Gene ID Reads Annotation
Col7a1 ENSMUSG00000025650 32 collagen, type VII, alpha 1 [Source:MGI Symbol;Acc:MGI:88462]







Genes with expression patterns similar to Col7a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col7a1 ENSMUSG00000025650 32 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type VII, alpha 1 [Source:MGI Symbol;Acc:MGI:88462]
2. Nr1h3 ENSMUSG00000002108 35 1.636 - - 0.757 - - 0.879 nuclear receptor subfamily 1, group H, member 3 [Source:MGI Symbol;Acc:MGI:1352462]
3. Syt12 ENSMUSG00000049303 17 1.587 - 0.731 0.856 - - - synaptotagmin XII [Source:MGI Symbol;Acc:MGI:2159601]
4. Lama3 ENSMUSG00000024421 55 1.585 0.768 - 0.817 - - - laminin, alpha 3 [Source:MGI Symbol;Acc:MGI:99909]
5. Rsph4a ENSMUSG00000039552 3 1 1.000 - - - - - radial spoke head 4 homolog A (Chlamydomonas) [Source:MGI Symbol;Acc:MGI:3027894]
6. Gm13079 Gm13079 4 1 1.000 - - - - -
7. Gucy2e ENSMUSG00000020890 7 1 1.000 - - - - - guanylate cyclase 2e [Source:MGI Symbol;Acc:MGI:105123]
8. Sbspon ENSMUSG00000032719 9 1 1.000 - - - - - somatomedin B and thrombospondin, type 1 domain containing [Source:MGI Symbol;Acc:MGI:2684952]
9. Ovol1 ENSMUSG00000024922 14 1 1.000 - - - - - ovo like zinc finger 1 [Source:MGI Symbol;Acc:MGI:1330290]
10. Gm7670 ENSMUSG00000082608 3 0.958 - - - - - 0.958 predicted gene 7670 [Source:MGI Symbol;Acc:MGI:3648912]
11. Pth2r ENSMUSG00000025946 5 0.958 - - - - - 0.958 parathyroid hormone 2 receptor [Source:MGI Symbol;Acc:MGI:2180917]
12. Sptlc3 ENSMUSG00000039092 6 0.958 - - - - - 0.958 serine palmitoyltransferase, long chain base subunit 3 [Source:MGI Symbol;Acc:MGI:2444678]
13. Gm8566 ENSMUSG00000047905 10 0.958 - - - - - 0.958 predicted pseudogene 8566 [Source:MGI Symbol;Acc:MGI:3647296]
14. Acot3 ENSMUSG00000021228 4 0.958 - - - - - 0.958 acyl-CoA thioesterase 3 [Source:MGI Symbol;Acc:MGI:2159619]
15. 4931403E22Rik ENSMUSG00000093772 3 0.958 - - - - - 0.958 RIKEN cDNA 4931403E22 gene [Source:MGI Symbol;Acc:MGI:1918192]
16. 1700041G16Rik ENSMUSG00000054822 3 0.958 - - - - - 0.958 RIKEN cDNA 1700041G16 gene [Source:MGI Symbol;Acc:MGI:1920549]
17. Gm16158 ENSMUSG00000086410 4 0.958 - - - - - 0.958 predicted gene 16158 [Source:MGI Symbol;Acc:MGI:3801750]
18. Krt73 ENSMUSG00000063661 3 0.958 - - - - - 0.958 keratin 73 [Source:MGI Symbol;Acc:MGI:3607712]
19. Gpr149 ENSMUSG00000043441 6 0.958 - - - - - 0.958 G protein-coupled receptor 149 [Source:MGI Symbol;Acc:MGI:2443628]
20. Lrrc29 ENSMUSG00000041679 19 0.956 - - - - - 0.956 leucine rich repeat containing 29 [Source:MGI Symbol;Acc:MGI:2443262]
21. Sgcz ENSMUSG00000039539 10 0.951 - - - - - 0.951 sarcoglycan zeta [Source:MGI Symbol;Acc:MGI:2388820]
22. Gm16136 ENSMUSG00000089804 37 0.938 - - - - - 0.938 predicted gene 16136 [Source:MGI Symbol;Acc:MGI:3802137]
23. A230028O05Rik ENSMUSG00000096960 7 0.93 - - - - - 0.930 RIKEN cDNA A230028O05 gene [Source:MGI Symbol;Acc:MGI:2442126]
24. 1700104B16Rik ENSMUSG00000049476 10 0.929 - - - - - 0.929 RIKEN cDNA 1700104B16 gene [Source:MGI Symbol;Acc:MGI:1925886]
25. Tfr2 ENSMUSG00000029716 51 0.929 - - - - - 0.929 transferrin receptor 2 [Source:MGI Symbol;Acc:MGI:1354956]
26. Prss22 ENSMUSG00000045027 20 0.928 - - - - - 0.928 protease, serine 22 [Source:MGI Symbol;Acc:MGI:1918085]
27. Foxj1 ENSMUSG00000034227 14 0.927 - - - - - 0.927 forkhead box J1 [Source:MGI Symbol;Acc:MGI:1347474]
28. Hesx1 ENSMUSG00000040726 13 0.927 - - - - - 0.927 homeobox gene expressed in ES cells [Source:MGI Symbol;Acc:MGI:96071]
29. Foxl2 ENSMUSG00000050397 13 0.927 - - - - - 0.927 forkhead box L2 [Source:MGI Symbol;Acc:MGI:1349428]
30. Gm17455 ENSMUSG00000090439 8 0.925 - - - - - 0.925 predicted gene, 17455 [Source:MGI Symbol;Acc:MGI:4937089]
31. Gabrr2 ENSMUSG00000023267 15 0.924 - - - - - 0.924 gamma-aminobutyric acid (GABA) C receptor, subunit rho 2 [Source:MGI Symbol;Acc:MGI:95626]
32. Zan ENSMUSG00000079173 25 0.923 - - - - - 0.923 zonadhesin [Source:MGI Symbol;Acc:MGI:106656]
33. Them6 ENSMUSG00000056665 39 0.918 - - - - - 0.918 thioesterase superfamily member 6 [Source:MGI Symbol;Acc:MGI:1925301]
34. Cldn2 ENSMUSG00000047230 21 0.917 - - - - - 0.917 claudin 2 [Source:MGI Symbol;Acc:MGI:1276110]
35. Gm13841 ENSMUSG00000083833 17 0.917 - - - - - 0.917 predicted gene 13841 [Source:MGI Symbol;Acc:MGI:3650890]
36. Sost ENSMUSG00000001494 46 0.913 - - - - - 0.913 sclerostin [Source:MGI Symbol;Acc:MGI:1921749]
37. D330050G23Rik ENSMUSG00000085316 11 0.912 - - - - - 0.912 RIKEN cDNA D330050G23 gene [Source:MGI Symbol;Acc:MGI:2445155]
38. Gm4221 ENSMUSG00000096948 9 0.91 - - - - - 0.910 predicted gene 4221 [Source:MGI Symbol;Acc:MGI:3782397]
39. Lmx1a ENSMUSG00000026686 123 0.909 - - - - - 0.909 LIM homeobox transcription factor 1 alpha [Source:MGI Symbol;Acc:MGI:1888519]
40. C3ar1 ENSMUSG00000040552 119 0.904 - - 0.904 - - - complement component 3a receptor 1 [Source:MGI Symbol;Acc:MGI:1097680]
41. Acvr1c ENSMUSG00000026834 20 0.901 - - - - - 0.901 activin A receptor, type IC [Source:MGI Symbol;Acc:MGI:2661081]
42. 4930570N19Rik 4930570N19Rik 13 0.899 - - - - - 0.899
43. Gm20632 ENSMUSG00000093577 17 0.898 0.898 - - - - - predicted gene 20632 [Source:MGI Symbol;Acc:MGI:5313079]
44. Abca7 ENSMUSG00000035722 72 0.897 - - - - - 0.897 ATP-binding cassette, sub-family A (ABC1), member 7 [Source:MGI Symbol;Acc:MGI:1351646]
45. 2610035F20Rik ENSMUSG00000085555 139 0.897 - - - - - 0.897 RIKEN cDNA 2610035F20 gene [Source:MGI Symbol;Acc:MGI:1916498]
46. Avpr1a ENSMUSG00000020123 14 0.896 - - - - - 0.896 arginine vasopressin receptor 1A [Source:MGI Symbol;Acc:MGI:1859216]
47. Nwd1 ENSMUSG00000048148 12 0.886 - - - - - 0.886 NACHT and WD repeat domain containing 1 [Source:MGI Symbol;Acc:MGI:2442268]
48. Cxcl1 ENSMUSG00000029380 4 0.885 - - 0.885 - - - chemokine (C-X-C motif) ligand 1 [Source:MGI Symbol;Acc:MGI:108068]
49. Trp63 ENSMUSG00000022510 128 0.88 - - - - - 0.880 transformation related protein 63 [Source:MGI Symbol;Acc:MGI:1330810]
50. Ism1 ENSMUSG00000074766 194 0.879 - - - - - 0.879 isthmin 1, angiogenesis inhibitor [Source:MGI Symbol;Acc:MGI:2442963]
51. Snord17 ENSMUSG00000077714 249 0.877 - - 0.877 - - - small nucleolar RNA, C/D box 17 [Source:MGI Symbol;Acc:MGI:3819523]
52. Gm26721 ENSMUSG00000096943 22 0.877 - - 0.877 - - - predicted gene, 26721 [Source:MGI Symbol;Acc:MGI:5477215]
53. Syne3 ENSMUSG00000054150 8 0.877 - - 0.877 - - - spectrin repeat containing, nuclear envelope family member 3 [Source:MGI Symbol;Acc:MGI:2442408]
54. Gm26771 ENSMUSG00000097250 8 0.872 - - 0.872 - - - predicted gene, 26771 [Source:MGI Symbol;Acc:MGI:5477265]
55. RP24-325L16.1 RP24-325L16.1 31 0.871 - - 0.871 - - -
56. Slc11a1 ENSMUSG00000026177 34 0.871 - - 0.871 - - - solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 [Source:MGI Symbol;Acc:MGI:1345275]
57. Atp2c2 ENSMUSG00000034112 67 0.87 - - - - - 0.870 ATPase, Ca++ transporting, type 2C, member 2 [Source:MGI Symbol;Acc:MGI:1916297]
58. 1700057H21Rik ENSMUSG00000086007 2 0.869 - - 0.869 - - - RIKEN cDNA 1700057H21 gene [Source:MGI Symbol;Acc:MGI:1920625]
59. Prl8a6 ENSMUSG00000021345 4 0.869 - - 0.869 - - - prolactin family 8, subfamily a, member 6 [Source:MGI Symbol;Acc:MGI:1332225]
60. Gm20628 ENSMUSG00000093656 3 0.869 - - 0.869 - - - predicted gene 20628 [Source:MGI Symbol;Acc:MGI:5313075]
61. Fcna ENSMUSG00000026938 10 0.869 - - 0.869 - - - ficolin A [Source:MGI Symbol;Acc:MGI:1340905]
62. Gm25541 ENSMUSG00000080538 21 0.869 - - 0.869 - - - predicted gene, 25541 [Source:MGI Symbol;Acc:MGI:5455318]
63. Gm12295 ENSMUSG00000085162 3 0.869 - - 0.869 - - - predicted gene 12295 [Source:MGI Symbol;Acc:MGI:3650535]
64. Gm773 ENSMUSG00000073177 2 0.869 - - 0.869 - - - predicted gene 773 [Source:MGI Symbol;Acc:MGI:2685619]
65. Lrrc25 ENSMUSG00000049988 4 0.869 - - 0.869 - - - leucine rich repeat containing 25 [Source:MGI Symbol;Acc:MGI:2445284]
66. Gm14951 ENSMUSG00000084776 22 0.869 - - 0.869 - - - predicted gene 14951 [Source:MGI Symbol;Acc:MGI:3705251]
67. Gm22257 ENSMUSG00000089312 2 0.869 - - 0.869 - - - predicted gene, 22257 [Source:MGI Symbol;Acc:MGI:5452034]
68. Dupd1 ENSMUSG00000063821 7 0.869 - - 0.869 - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:MGI Symbol;Acc:MGI:3647127]
69. 2310042E22Rik 2310042E22Rik 17 0.869 - - 0.869 - - -
70. Ugt3a2 ENSMUSG00000049152 5 0.869 - - 0.869 - - - UDP glycosyltransferases 3 family, polypeptide A2 [Source:MGI Symbol;Acc:MGI:2145969]
71. Gm11370 ENSMUSG00000081905 2 0.869 - - 0.869 - - - predicted gene 11370 [Source:MGI Symbol;Acc:MGI:3651832]
72. Cngb1 ENSMUSG00000031789 4 0.866 - - 0.866 - - - cyclic nucleotide gated channel beta 1 [Source:MGI Symbol;Acc:MGI:2664102]
73. Hcrtr2 ENSMUSG00000032360 19 0.866 - - 0.866 - - - hypocretin (orexin) receptor 2 [Source:MGI Symbol;Acc:MGI:2680765]
74. Pirb ENSMUSG00000058818 16 0.865 - - 0.865 - - - paired Ig-like receptor B [Source:MGI Symbol;Acc:MGI:894311]
75. Nrn1 ENSMUSG00000039114 123 0.865 0.865 - - - - - neuritin 1 [Source:MGI Symbol;Acc:MGI:1915654]
76. Gm7416 ENSMUSG00000084031 7 0.865 - - 0.865 - - - predicted gene 7416 [Source:MGI Symbol;Acc:MGI:3647901]
77. Ssh3 ENSMUSG00000034616 23 0.863 - - - - - 0.863 slingshot protein phosphatase 3 [Source:MGI Symbol;Acc:MGI:2683546]
78. C3 ENSMUSG00000024164 24 0.863 0.863 - - - - - complement component 3 [Source:MGI Symbol;Acc:MGI:88227]
79. Gm25520 ENSMUSG00000089014 14 0.862 - - 0.862 - - - predicted gene, 25520 [Source:MGI Symbol;Acc:MGI:5455297]
80. Rasal3 ENSMUSG00000052142 7 0.861 - - 0.861 - - - RAS protein activator like 3 [Source:MGI Symbol;Acc:MGI:2444128]
81. Gm25789 ENSMUSG00000065228 22 0.861 - - 0.861 - - - predicted gene, 25789 [Source:MGI Symbol;Acc:MGI:5455566]
82. Tal2 ENSMUSG00000028417 15 0.861 - - - - - 0.861 T cell acute lymphocytic leukemia 2 [Source:MGI Symbol;Acc:MGI:99540]
83. Sprtn ENSMUSG00000031986 4 0.858 - - 0.858 - - - SprT-like N-terminal domain [Source:MGI Symbol;Acc:MGI:2685351]
84. Gpr35 ENSMUSG00000026271 17 0.856 - - 0.856 - - - G protein-coupled receptor 35 [Source:MGI Symbol;Acc:MGI:1929509]
85. Cyp2r1 ENSMUSG00000030670 7 0.856 0.856 - - - - - cytochrome P450, family 2, subfamily r, polypeptide 1 [Source:MGI Symbol;Acc:MGI:2449771]
86. Plch2 ENSMUSG00000029055 31 0.856 - - - - - 0.856 phospholipase C, eta 2 [Source:MGI Symbol;Acc:MGI:2443078]
87. Gm10737 Gm10737 2 0.854 0.854 - - - - -
88. B4galnt2 ENSMUSG00000013418 1 0.854 0.854 - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 2 [Source:MGI Symbol;Acc:MGI:1342058]
89. Gsto2 ENSMUSG00000025069 15 0.854 0.854 - - - - - glutathione S-transferase omega 2 [Source:MGI Symbol;Acc:MGI:1915464]
90. Hpgds ENSMUSG00000029919 68 0.854 - - 0.854 - - - hematopoietic prostaglandin D synthase [Source:MGI Symbol;Acc:MGI:1859384]
91. Zfp78 ENSMUSG00000055150 2 0.854 0.854 - - - - - zinc finger protein 78 [Source:MGI Symbol;Acc:MGI:107783]
92. Cldn26 Cldn26 7 0.854 0.854 - - - - -
93. Emx1 ENSMUSG00000033726 16 0.854 0.854 - - - - - empty spiracles homeobox 1 [Source:MGI Symbol;Acc:MGI:95387]
94. Gm22027 ENSMUSG00000084686 9 0.854 0.854 - - - - - predicted gene, 22027 [Source:MGI Symbol;Acc:MGI:5451804]
95. BC089491 6 0.854 0.854 - - - - - cDNA sequence BC089491
96. Gm13056 ENSMUSG00000085395 13 0.854 - - 0.854 - - - predicted gene 13056 [Source:MGI Symbol;Acc:MGI:3650725]
97. P2ry13 ENSMUSG00000036362 46 0.854 0.854 - - - - - purinergic receptor P2Y, G-protein coupled 13 [Source:MGI Symbol;Acc:MGI:1921441]
98. Gm14310 Gm14310 1 0.854 0.854 - - - - -
99. Ifi27l2a ENSMUSG00000079017 5 0.854 0.854 - - - - - interferon, alpha-inducible protein 27 like 2A [Source:MGI Symbol;Acc:MGI:1924183]
100. 9930022D16Rik ENSMUSG00000045065 2 0.854 0.854 - - - - - RIKEN cDNA 9930022D16 gene [Source:MGI Symbol;Acc:MGI:2444178]

There are 208 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA