Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Col6a6

Gene Name Gene ID Reads Annotation
Col6a6 ENSMUSG00000043719 8 collagen, type VI, alpha 6 [Source:MGI Symbol;Acc:MGI:2444259]







Genes with expression patterns similar to Col6a6

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col6a6 ENSMUSG00000043719 8 5 - 1.000 1.000 1.000 1.000 1.000 collagen, type VI, alpha 6 [Source:MGI Symbol;Acc:MGI:2444259]
2. Gm13743 ENSMUSG00000083688 5 1 - - - - 1.000 - predicted gene 13743 [Source:MGI Symbol;Acc:MGI:3650802]
3. 1700008I05Rik 1700008I05Rik 1 1 - 1.000 - - - -
4. Lrrc7 ENSMUSG00000028176 10 1 - 1.000 - - - - leucine rich repeat containing 7 [Source:MGI Symbol;Acc:MGI:2676665]
5. Gm15947 ENSMUSG00000089697 2 1 - 1.000 - - - - predicted gene 15947 [Source:MGI Symbol;Acc:MGI:3801748]
6. 1110018N20Rik ENSMUSG00000085151 4 1 - 1.000 - - - - RIKEN cDNA 1110018N20 gene [Source:MGI Symbol;Acc:MGI:1915753]
7. Gm14274 ENSMUSG00000083793 1 1 - - - - 1.000 - predicted gene 14274 [Source:MGI Symbol;Acc:MGI:3649603]
8. 4930562D21Rik ENSMUSG00000086608 5 1 - - - - 1.000 - RIKEN cDNA 4930562D21 gene [Source:MGI Symbol;Acc:MGI:1922574]
9. Gm16158 ENSMUSG00000086410 4 1 - 1.000 - - - - predicted gene 16158 [Source:MGI Symbol;Acc:MGI:3801750]
10. Gm26442 ENSMUSG00000064522 1 1 - - - - 1.000 - predicted gene, 26442 [Source:MGI Symbol;Acc:MGI:5456219]
11. 1700026D08Rik 1700026D08Rik 16 1 - 1.000 - - - -
12. Gm12669 ENSMUSG00000100863 3 1 - 1.000 - - - - predicted gene 12669 [Source:MGI Symbol;Acc:MGI:3651683]
13. Ubl4b ENSMUSG00000055891 1 1 - 1.000 - - - - ubiquitin-like 4B [Source:MGI Symbol;Acc:MGI:1914841]
14. Klhl38 ENSMUSG00000022357, ENSMUSG00000116332 3 1 - - - - 1.000 - kelch-like 38 [Source:MGI Symbol;Acc:MGI:3045310]
15. Gm26579 ENSMUSG00000097104 1 1 - 1.000 - - - - predicted gene, 26579 [Source:MGI Symbol;Acc:MGI:5477073]
16. Gm15921 ENSMUSG00000094092 3 1 - 1.000 - - - - predicted gene 15921 [Source:MGI Symbol;Acc:MGI:3801933]
17. Gm16174 ENSMUSG00000087593 6 1 - 1.000 - - - - predicted gene 16174 [Source:MGI Symbol;Acc:MGI:3801857]
18. Slco6c1 ENSMUSG00000026331 10 1 - 1.000 - - - - solute carrier organic anion transporter family, member 6c1 [Source:MGI Symbol;Acc:MGI:1921691]
19. Pgpep1l ENSMUSG00000030553 4 1 - 1.000 - - - - pyroglutamyl-peptidase I-like [Source:MGI Symbol;Acc:MGI:1925694]
20. Fgf7 ENSMUSG00000027208 15 1 - 1.000 - - - - fibroblast growth factor 7 [Source:MGI Symbol;Acc:MGI:95521]
21. Ltb4r2 ENSMUSG00000040432 6 1 - - - - 1.000 - leukotriene B4 receptor 2 [Source:MGI Symbol;Acc:MGI:1888501]
22. Cyp11b1 ENSMUSG00000075604 1 1 - 1.000 - - - - cytochrome P450, family 11, subfamily b, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88583]
23. Gm14703 ENSMUSG00000087644 5 1 - 1.000 - - - - predicted gene 14703 [Source:MGI Symbol;Acc:MGI:3705165]
24. Aipl1 ENSMUSG00000040554 9 1 - - - - 1.000 - aryl hydrocarbon receptor-interacting protein-like 1 [Source:MGI Symbol;Acc:MGI:2148800]
25. 4930539E08Rik ENSMUSG00000048905 9 1 - 1.000 - - - - RIKEN cDNA 4930539E08 gene [Source:MGI Symbol;Acc:MGI:1925441]
26. Sox14 ENSMUSG00000053747 13 1 - 1.000 - - - - SRY (sex determining region Y)-box 14 [Source:MGI Symbol;Acc:MGI:98362]
27. Snai3 ENSMUSG00000006587 3 1 - - - - 1.000 - snail family zinc finger 3 [Source:MGI Symbol;Acc:MGI:1353563]
28. Gm20647 ENSMUSG00000093400 1 1 - - - - 1.000 - predicted gene 20647 [Source:MGI Symbol;Acc:MGI:5313094]
29. Wdr20b Wdr20b 1 1 - 1.000 - - - -
30. Psg21 ENSMUSG00000070796 3 1 - - - - 1.000 - pregnancy-specific glycoprotein 21 [Source:MGI Symbol;Acc:MGI:1891353]
31. Slc22a30 ENSMUSG00000052562 5 1 - 1.000 - - - - solute carrier family 22, member 30 [Source:MGI Symbol;Acc:MGI:2442750]
32. Hsd11b1 ENSMUSG00000016194 2 1 - 1.000 - - - - hydroxysteroid 11-beta dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:103562]
33. C230014O12Rik ENSMUSG00000087461 17 1 - 1.000 - - - - RIKEN cDNA C230014O12 gene [Source:MGI Symbol;Acc:MGI:3045377]
34. 1700028I16Rik ENSMUSG00000056821 3 1 - 1.000 - - - - RIKEN cDNA 1700028I16 gene [Source:MGI Symbol;Acc:MGI:1917253]
35. Pcdhb18 ENSMUSG00000048347 44 1 - 1.000 - - - - protocadherin beta 18 [Source:MGI Symbol;Acc:MGI:2136756]
36. Gm24218 ENSMUSG00000094639 1 1 - 1.000 - - - - predicted gene, 24218 [Source:MGI Symbol;Acc:MGI:5453995]
37. Krt9 ENSMUSG00000051617 7 1 - 1.000 - - - - keratin 9 [Source:MGI Symbol;Acc:MGI:96696]
38. Gm25995 ENSMUSG00000093137 2 1 - - - - 1.000 - predicted gene, 25995 [Source:MGI Symbol;Acc:MGI:5455772]
39. Ormdl2 ENSMUSG00000025353 5 1 - 1.000 - - - - ORM1-like 2 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914094]
40. Gm7312 ENSMUSG00000083573 5 1 - 1.000 - - - - predicted gene 7312 [Source:MGI Symbol;Acc:MGI:3646347]
41. RP23-93M1.2 RP23-93M1.2 2 1 - - - - 1.000 -
42. Gm26902 ENSMUSG00000097558 2 1 - - - - 1.000 - predicted gene, 26902 [Source:MGI Symbol;Acc:MGI:5477396]
43. Ssmem1 ENSMUSG00000029784 19 1 - 1.000 - - - - serine-rich single-pass membrane protein 1 [Source:MGI Symbol;Acc:MGI:1922897]
44. Rps15a-ps4 ENSMUSG00000083757 11 1 - 1.000 - - - - ribosomal protein S15A, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3652187]
45. Gm8425 ENSMUSG00000091786 3 1 - - - - 1.000 - predicted gene 8425 [Source:MGI Symbol;Acc:MGI:3645899]
46. Gm13652 ENSMUSG00000087333 91 1 - - - 1.000 - - predicted gene 13652 [Source:MGI Symbol;Acc:MGI:3650033]
47. A530083I20Rik ENSMUSG00000097322 5 1 - 1.000 - - - - RIKEN cDNA A530083I20 gene [Source:MGI Symbol;Acc:MGI:3040711]
48. Gm12247 ENSMUSG00000081223 16 1 - 1.000 - - - - predicted gene 12247 [Source:MGI Symbol;Acc:MGI:3649489]
49. Gm8444 ENSMUSG00000069439 12 1 - 1.000 - - - - predicted gene 8444 [Source:MGI Symbol;Acc:MGI:3645809]
50. Gm12434 ENSMUSG00000085660 4 1 - - - - 1.000 - predicted gene 12434 [Source:MGI Symbol;Acc:MGI:3649453]
51. Gm853 ENSMUSG00000023120 1 1 - 1.000 - - - - predicted gene 853 [Source:MGI Symbol;Acc:MGI:2685699]
52. Mal2 ENSMUSG00000024479 42 0.979 - - - 0.979 - - mal, T cell differentiation protein 2 [Source:MGI Symbol;Acc:MGI:2146021]
53. Acbd4 ENSMUSG00000056938 31 0.967 - 0.967 - - - - acyl-Coenzyme A binding domain containing 4 [Source:MGI Symbol;Acc:MGI:1914381]
54. Pcdhb20 ENSMUSG00000046191 25 0.953 - 0.953 - - - - protocadherin beta 20 [Source:MGI Symbol;Acc:MGI:2136758]
55. Gpha2 ENSMUSG00000024784, ENSMUSG00000107297 6 0.938 - - - - 0.938 - glycoprotein hormone alpha 2 [Source:MGI Symbol;Acc:MGI:2156541]
56. Gm26575 ENSMUSG00000097926 6 0.938 - - - - 0.938 - predicted gene, 26575 [Source:MGI Symbol;Acc:MGI:5477069]
57. Eppin ENSMUSG00000017733 3 0.936 - - - - 0.936 - epididymal peptidase inhibitor [Source:MGI Symbol;Acc:MGI:1922776]
58. Ccl12 ENSMUSG00000035352 2 0.928 - - - - 0.928 - chemokine (C-C motif) ligand 12 [Source:MGI Symbol;Acc:MGI:108224]
59. Gm15859 ENSMUSG00000086944 8 0.927 - - - - 0.927 - predicted gene 15859 [Source:MGI Symbol;Acc:MGI:3801904]
60. Gm6733 ENSMUSG00000084329 8 0.925 - - - - 0.925 - predicted gene 6733 [Source:MGI Symbol;Acc:MGI:3645402]
61. Col28a1 ENSMUSG00000068794 6 0.925 - - - - 0.925 - collagen, type XXVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:2685312]
62. 1700095J07Rik ENSMUSG00000084861 13 0.917 - - - - 0.917 - RIKEN cDNA 1700095J07 gene [Source:MGI Symbol;Acc:MGI:1920824]
63. Cabp7 ENSMUSG00000009075 20 0.914 - - 0.914 - - - calcium binding protein 7 [Source:MGI Symbol;Acc:MGI:2183437]
64. 2610207O16Rik 2610207O16Rik 1 0.914 - - 0.914 - - -
65. Gm10069 ENSMUSG00000059659 14 0.91 - - - - 0.910 - predicted gene 10069 [Source:MGI Symbol;Acc:MGI:3641875]
66. Gm10489 ENSMUSG00000097444 5 0.897 - - - - 0.897 - predicted gene 10489 [Source:MGI Symbol;Acc:MGI:3704505]
67. 4933408J17Rik ENSMUSG00000097407 6 0.887 - - - - 0.887 - RIKEN cDNA 4933408J17 gene [Source:MGI Symbol;Acc:MGI:1921704]
68. Duox2 ENSMUSG00000068452 28 0.881 - - - 0.881 - - dual oxidase 2 [Source:MGI Symbol;Acc:MGI:3036280]
69. Rnf222 ENSMUSG00000046490 6 0.879 - - - - 0.879 - ring finger protein 222 [Source:MGI Symbol;Acc:MGI:2443227]
70. Gm8379 ENSMUSG00000090618 2 0.877 - - - - 0.877 - predicted gene 8379 [Source:MGI Symbol;Acc:MGI:3646778]
71. B230209K01Rik B230209K01Rik 4 0.873 - - - - 0.873 -
72. Gm10767 ENSMUSG00000074826 19 0.868 - - - - 0.868 - predicted gene 10767 [Source:MGI Symbol;Acc:MGI:3642136]
73. Gm13394 ENSMUSG00000083773 12 0.866 - - - - 0.866 - predicted gene 13394 [Source:MGI Symbol;Acc:MGI:3651848]
74. Gpr1 ENSMUSG00000046856 10 0.865 - - - - 0.865 - G protein-coupled receptor 1 [Source:MGI Symbol;Acc:MGI:2385324]
75. Trim30d ENSMUSG00000057596 9 0.862 - - - - 0.862 - tripartite motif-containing 30D [Source:MGI Symbol;Acc:MGI:3035181]
76. Pamr1 ENSMUSG00000027188 87 0.857 - - - - 0.857 - peptidase domain containing associated with muscle regeneration 1 [Source:MGI Symbol;Acc:MGI:2445082]
77. Slc6a1 ENSMUSG00000030310 22 0.855 - - 0.855 - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 1 [Source:MGI Symbol;Acc:MGI:95627]
78. Arl11 ENSMUSG00000043157 10 0.849 - 0.849 - - - - ADP-ribosylation factor-like 11 [Source:MGI Symbol;Acc:MGI:2444054]
79. Omp ENSMUSG00000074006 19 0.846 - - - - 0.846 - olfactory marker protein [Source:MGI Symbol;Acc:MGI:97436]
80. Acox2 ENSMUSG00000021751 8 0.846 - - - - 0.846 - acyl-Coenzyme A oxidase 2, branched chain [Source:MGI Symbol;Acc:MGI:1934852]
81. U90926 ENSMUSG00000029409 16 0.844 - 0.844 - - - - cDNA sequence U90926 [Source:MGI Symbol;Acc:MGI:1930915]
82. Gm5456 ENSMUSG00000094242 7 0.841 - - 0.841 - - - predicted gene 5456 [Source:MGI Symbol;Acc:MGI:3643775]
83. Rnasek ENSMUSG00000093989 0 0.841 - - 0.841 - - - ribonuclease, RNase K [Source:MGI Symbol;Acc:MGI:106369]
84. Gm13496 ENSMUSG00000085755 0 0.841 - - 0.841 - - - predicted gene 13496 [Source:MGI Symbol;Acc:MGI:3651033]
85. 5033403F01Rik ENSMUSG00000096932 4 0.839 - 0.839 - - - - RIKEN cDNA 5033403F01 gene [Source:MGI Symbol;Acc:MGI:1923208]
86. 4933427I04Rik ENSMUSG00000073761 19 0.839 - 0.839 - - - - Riken cDNA 4933427I04 gene [Source:MGI Symbol;Acc:MGI:3613760]
87. Gm12525 ENSMUSG00000078601 4 0.832 - - 0.832 - - - predicted gene 12525 [Source:MGI Symbol;Acc:MGI:3649596]
88. Gm15559 ENSMUSG00000086401 9 0.83 - - - - 0.830 - predicted gene 15559 [Source:MGI Symbol;Acc:MGI:3783008]
89. Dlx6 ENSMUSG00000029754 23 0.823 - 0.823 - - - - distal-less homeobox 6 [Source:MGI Symbol;Acc:MGI:101927]
90. Evi2a ENSMUSG00000078771 27 0.806 - - - - 0.806 - ecotropic viral integration site 2a [Source:MGI Symbol;Acc:MGI:95458]
91. C630020P19Rik C630020P19Rik 34 0.796 - - 0.796 - - -
92. Pgam2 ENSMUSG00000020475 99 0.795 - - - 0.795 - - phosphoglycerate mutase 2 [Source:MGI Symbol;Acc:MGI:1933118]
93. Gm10780 ENSMUSG00000074877 28 0.792 - - - - 0.792 - predicted gene 10780 [Source:MGI Symbol;Acc:MGI:3642422]
94. Egr2 ENSMUSG00000037868, ENSMUSG00000116458 10 0.791 - 0.791 - - - - early growth response 2 [Source:MGI Symbol;Acc:MGI:95296]
95. 1700006J14Rik ENSMUSG00000034764 32 0.784 - 0.784 - - - - RIKEN cDNA 1700006J14 gene [Source:MGI Symbol;Acc:MGI:2447818]
96. Gm20721 ENSMUSG00000090625 42 0.783 - - - - 0.783 - predicted gene, 20721 [Source:MGI Symbol;Acc:MGI:5313030]
97. Wdr96 Wdr96 4 0.776 - - - - 0.776 -
98. Gpam ENSMUSG00000024978 18 0.774 - - - - 0.774 - glycerol-3-phosphate acyltransferase, mitochondrial [Source:MGI Symbol;Acc:MGI:109162]
99. Myrfl ENSMUSG00000034057 6 0.773 - - - - 0.773 - myelin regulatory factor-like [Source:MGI Symbol;Acc:MGI:2685085]
100. Rgs18 ENSMUSG00000026357 156 0.772 - - 0.772 - - - regulator of G-protein signaling 18 [Source:MGI Symbol;Acc:MGI:1927498]

There are 102 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA