Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Col6a1

Gene Name Gene ID Reads Annotation
Col6a1 ENSMUSG00000001119 391 collagen, type VI, alpha 1 [Source:MGI Symbol;Acc:MGI:88459]







Genes with expression patterns similar to Col6a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col6a1 ENSMUSG00000001119 391 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type VI, alpha 1 [Source:MGI Symbol;Acc:MGI:88459]
2. Pnpo ENSMUSG00000018659 322 0.823 - 0.823 - - - - pyridoxine 5'-phosphate oxidase [Source:MGI Symbol;Acc:MGI:2144151]
3. Oas1c ENSMUSG00000001166 16 0.819 - - 0.819 - - - 2'-5' oligoadenylate synthetase 1C [Source:MGI Symbol;Acc:MGI:2149633]
4. C1qtnf1 ENSMUSG00000017446 57 0.808 - - 0.808 - - - C1q and tumor necrosis factor related protein 1 [Source:MGI Symbol;Acc:MGI:1919254]
5. Lrrc8e ENSMUSG00000046589 169 0.801 - 0.801 - - - - leucine rich repeat containing 8 family, member E [Source:MGI Symbol;Acc:MGI:1919517]
6. Gm16907 ENSMUSG00000097242 72 0.8 - 0.800 - - - - predicted gene, 16907 [Source:MGI Symbol;Acc:MGI:4439831]
7. Bace2 ENSMUSG00000040605 132 0.798 - 0.798 - - - - beta-site APP-cleaving enzyme 2 [Source:MGI Symbol;Acc:MGI:1860440]
8. Pate2 ENSMUSG00000074452 74 0.795 - 0.795 - - - - prostate and testis expressed 2 [Source:MGI Symbol;Acc:MGI:2685692]
9. Ak5 ENSMUSG00000039058 89 0.783 - 0.783 - - - - adenylate kinase 5 [Source:MGI Symbol;Acc:MGI:2677491]
10. Rspo1 ENSMUSG00000028871 365 0.779 - 0.779 - - - - R-spondin 1 [Source:MGI Symbol;Acc:MGI:2183426]
11. Gm12657 ENSMUSG00000063314 79 0.777 - 0.777 - - - - predicted gene 12657 [Source:MGI Symbol;Acc:MGI:3651714]
12. Gm10736 ENSMUSG00000096842 39 0.775 - 0.775 - - - - predicted gene 10736 [Source:MGI Symbol;Acc:MGI:3704412]
13. 6030443J06Rik ENSMUSG00000097207 38 0.774 - 0.774 - - - - RIKEN cDNA 6030443J06 gene [Source:MGI Symbol;Acc:MGI:2444595]
14. Pcdh10 ENSMUSG00000049100 172 0.769 - 0.769 - - - - protocadherin 10 [Source:MGI Symbol;Acc:MGI:1338042]
15. 1810062O18Rik ENSMUSG00000084925 34 0.766 - 0.766 - - - - RIKEN cDNA 1810062O18 gene [Source:MGI Symbol;Acc:MGI:1922852]
16. Gm17108 ENSMUSG00000091133 29 0.766 - 0.766 - - - - predicted gene 17108 [Source:MGI Symbol;Acc:MGI:4937935]
17. St14 ENSMUSG00000031995 31 0.766 - 0.766 - - - - suppression of tumorigenicity 14 (colon carcinoma) [Source:MGI Symbol;Acc:MGI:1338881]
18. Dact2 ENSMUSG00000048826 163 0.765 0.765 - - - - - dishevelled-binding antagonist of beta-catenin 2 [Source:MGI Symbol;Acc:MGI:1920347]
19. Gm12198 ENSMUSG00000085564 18 0.765 - 0.765 - - - - predicted gene 12198 [Source:MGI Symbol;Acc:MGI:3650407]
20. Stap1 ENSMUSG00000029254 13 0.764 - 0.764 - - - - signal transducing adaptor family member 1 [Source:MGI Symbol;Acc:MGI:1926193]
21. Gm10155 ENSMUSG00000066180 21 0.764 - 0.764 - - - - predicted gene 10155 [Source:MGI Symbol;Acc:MGI:3642914]
22. Gm16020 ENSMUSG00000072576 11 0.763 - 0.763 - - - - predicted gene 16020 [Source:MGI Symbol;Acc:MGI:3801865]
23. Gm12367 ENSMUSG00000084828 11 0.763 - 0.763 - - - - predicted gene 12367 [Source:MGI Symbol;Acc:MGI:3649554]
24. 9130230N09Rik ENSMUSG00000092626 12 0.763 - 0.763 - - - - RIKEN cDNA 9130230N09 gene [Source:MGI Symbol;Acc:MGI:1924921]
25. Irs3 ENSMUSG00000047182 11 0.763 - 0.763 - - - - insulin receptor substrate 3 [Source:MGI Symbol;Acc:MGI:1194882]
26. Prl2c1 ENSMUSG00000062551 9 0.763 - 0.763 - - - - Prolactin family 2, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:3649927]
27. Hist2h2be ENSMUSG00000068854 501 0.762 - 0.762 - - - - histone cluster 2, H2be [Source:MGI Symbol;Acc:MGI:2448415]
28. Il1r2 ENSMUSG00000026073 26 0.762 - 0.762 - - - - interleukin 1 receptor, type II [Source:MGI Symbol;Acc:MGI:96546]
29. S100a6 ENSMUSG00000001025 290 0.761 - - 0.761 - - - S100 calcium binding protein A6 (calcyclin) [Source:MGI Symbol;Acc:MGI:1339467]
30. Myo1f ENSMUSG00000024300 181 0.759 - 0.759 - - - - myosin IF [Source:MGI Symbol;Acc:MGI:107711]
31. Mocs3 ENSMUSG00000074576 94 0.759 - 0.759 - - - - molybdenum cofactor synthesis 3 [Source:MGI Symbol;Acc:MGI:1916622]
32. Oit3 ENSMUSG00000009654 48 0.756 - - - - 0.756 - oncoprotein induced transcript 3 [Source:MGI Symbol;Acc:MGI:1201782]
33. Kctd10 ENSMUSG00000001098 136 0.755 - 0.755 - - - - potassium channel tetramerisation domain containing 10 [Source:MGI Symbol;Acc:MGI:2141207]
34. C030013C21Rik ENSMUSG00000085078 24 0.754 - 0.754 - - - - RIKEN cDNA C030013C21 gene [Source:MGI Symbol;Acc:MGI:1924667]
35. Sp7 ENSMUSG00000060284 33 0.754 - - 0.754 - - - Sp7 transcription factor 7 [Source:MGI Symbol;Acc:MGI:2153568]
36. Mical2 ENSMUSG00000038244 295 0.753 - - 0.753 - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:MGI Symbol;Acc:MGI:2444947]
37. Stard5 ENSMUSG00000046027 330 0.753 - - 0.753 - - - StAR-related lipid transfer (START) domain containing 5 [Source:MGI Symbol;Acc:MGI:2156765]
38. 1700016K19Rik ENSMUSG00000053783 24 0.753 - 0.753 - - - - RIKEN cDNA 1700016K19 gene [Source:MGI Symbol;Acc:MGI:1921480]
39. Cacnb2 ENSMUSG00000057914 107 0.753 - 0.753 - - - - calcium channel, voltage-dependent, beta 2 subunit [Source:MGI Symbol;Acc:MGI:894644]
40. Gm24187 ENSMUSG00000088609 210 0.752 - 0.752 - - - - predicted gene, 24187 [Source:MGI Symbol;Acc:MGI:5453964]
41. Lect2 ENSMUSG00000021539 23 0.752 - - - - 0.752 - leukocyte cell-derived chemotaxin 2 [Source:MGI Symbol;Acc:MGI:1278342]
42. Dyrk1b ENSMUSG00000002409 201 0.751 0.751 - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b [Source:MGI Symbol;Acc:MGI:1330302]
43. Gm2026 ENSMUSG00000078886 27 0.751 - 0.751 - - - - predicted gene 2026 [Source:MGI Symbol;Acc:MGI:3780195]
44. Gm12577 ENSMUSG00000083834 78 0.751 - 0.751 - - - - predicted gene 12577 [Source:MGI Symbol;Acc:MGI:3651713]
45. Gm25776 ENSMUSG00000080365 59 0.751 - 0.751 - - - - predicted gene, 25776 [Source:MGI Symbol;Acc:MGI:5455553]
46. Kcna6 ENSMUSG00000038077 132 0.75 - 0.750 - - - - potassium voltage-gated channel, shaker-related, subfamily, member 6 [Source:MGI Symbol;Acc:MGI:96663]
47. AA474331 AA474331 111 0.749 - 0.749 - - - -
48. Daam1 ENSMUSG00000034574 933 0.748 - 0.748 - - - - dishevelled associated activator of morphogenesis 1 [Source:MGI Symbol;Acc:MGI:1914596]
49. Aox4 ENSMUSG00000038242 18 0.748 - - 0.748 - - - aldehyde oxidase 4 [Source:MGI Symbol;Acc:MGI:1919122]
50. Mitf ENSMUSG00000035158 96 0.748 - 0.748 - - - - melanogenesis associated transcription factor [Source:MGI Symbol;Acc:MGI:104554]
51. Snx9 ENSMUSG00000002365 1744 0.746 - - 0.746 - - - sorting nexin 9 [Source:MGI Symbol;Acc:MGI:1913866]
52. 5930422O12Rik ENSMUSG00000048544 74 0.746 - 0.746 - - - - RIKEN cDNA 5930422O12 gene [Source:MGI Symbol;Acc:MGI:2442538]
53. Zfp956 ENSMUSG00000045466 81 0.745 - 0.745 - - - - zinc finger protein 956 [Source:MGI Symbol;Acc:MGI:2141515]
54. Gm5595 249 0.745 - 0.745 - - - - predicted gene 5595
55. Gm22767 ENSMUSG00000088990 25 0.745 - 0.745 - - - - predicted gene, 22767 [Source:MGI Symbol;Acc:MGI:5452544]
56. Nipal2 ENSMUSG00000038879 37 0.744 - 0.744 - - - - NIPA-like domain containing 2 [Source:MGI Symbol;Acc:MGI:1924488]
57. Col9a3 ENSMUSG00000027570 98 0.742 - 0.742 - - - - collagen, type IX, alpha 3 [Source:MGI Symbol;Acc:MGI:894686]
58. Neu3 ENSMUSG00000035239 278 0.742 0.742 - - - - - neuraminidase 3 [Source:MGI Symbol;Acc:MGI:1355305]
59. 1700112E06Rik 52 0.742 - 0.742 - - - - RIKEN cDNA 1700112E06 gene, transcript variant X4
60. Rasgrp2 ENSMUSG00000032946, ENSMUSG00000106685 176 0.742 - 0.742 - - - - RAS, guanyl releasing protein 2 [Source:MGI Symbol;Acc:MGI:1333849]
61. 1700026L06Rik 1700026L06Rik 37 0.742 - 0.742 - - - -
62. Col9a2 ENSMUSG00000028626 672 0.741 - 0.741 - - - - collagen, type IX, alpha 2 [Source:MGI Symbol;Acc:MGI:88466]
63. Gm22 71 0.741 - 0.741 - - - - predicted gene 22, transcript variant X1
64. Gfod1 ENSMUSG00000051335 46 0.74 - 0.740 - - - - glucose-fructose oxidoreductase domain containing 1 [Source:MGI Symbol;Acc:MGI:2145304]
65. 2310007B03Rik ENSMUSG00000034159 31 0.737 - 0.737 - - - - RIKEN cDNA 2310007B03 gene [Source:MGI Symbol;Acc:MGI:1919124]
66. Rpl35 ENSMUSG00000062997 54 0.737 - 0.737 - - - - ribosomal protein L35 [Source:MGI Symbol;Acc:MGI:1913739]
67. MIMT1 MIMT1 23 0.736 - 0.736 - - - -
68. Spp2 ENSMUSG00000026295 29 0.735 - - - - 0.735 - secreted phosphoprotein 2 [Source:MGI Symbol;Acc:MGI:1922646]
69. Kng1 ENSMUSG00000022875 8 0.735 - - - - 0.735 - kininogen 1 [Source:MGI Symbol;Acc:MGI:1097705]
70. Plg ENSMUSG00000059481 37 0.735 - - - - 0.735 - plasminogen [Source:MGI Symbol;Acc:MGI:97620]
71. Hoxd11 ENSMUSG00000042499 16 0.734 - 0.734 - - - - homeobox D11 [Source:MGI Symbol;Acc:MGI:96203]
72. Ccsap ENSMUSG00000031971 259 0.732 - 0.732 - - - - centriole, cilia and spindle associated protein [Source:MGI Symbol;Acc:MGI:1920670]
73. Rasgrf2 ENSMUSG00000021708 16 0.731 - - - - 0.731 - RAS protein-specific guanine nucleotide-releasing factor 2 [Source:MGI Symbol;Acc:MGI:109137]
74. Grin2d ENSMUSG00000002771 119 0.73 - 0.730 - - - - glutamate receptor, ionotropic, NMDA2D (epsilon 4) [Source:MGI Symbol;Acc:MGI:95823]
75. Msh5 ENSMUSG00000007035 89 0.73 - 0.730 - - - - mutS homolog 5 [Source:MGI Symbol;Acc:MGI:1329021]
76. Mrgpre ENSMUSG00000048965 83 0.73 - - 0.730 - - - MAS-related GPR, member E [Source:MGI Symbol;Acc:MGI:2441884]
77. Gm8129 ENSMUSG00000059159 76 0.729 - 0.729 - - - - predicted pseudogene 8129 [Source:MGI Symbol;Acc:MGI:3646863]
78. Bin2 ENSMUSG00000098112 317 0.728 - 0.728 - - - - bridging integrator 2 [Source:MGI Symbol;Acc:MGI:3611448]
79. Ctsz ENSMUSG00000016256 997 0.726 - 0.726 - - - - cathepsin Z [Source:MGI Symbol;Acc:MGI:1891190]
80. Gm12191 ENSMUSG00000083061 359 0.726 - 0.726 - - - - predicted gene 12191 [Source:MGI Symbol;Acc:MGI:3651293]
81. Col8a2 ENSMUSG00000056174 221 0.724 - 0.724 - - - - collagen, type VIII, alpha 2 [Source:MGI Symbol;Acc:MGI:88464]
82. Mboat2 ENSMUSG00000020646 1038 0.724 - 0.724 - - - - membrane bound O-acyltransferase domain containing 2 [Source:MGI Symbol;Acc:MGI:1914466]
83. Zfp472 ENSMUSG00000053600 248 0.724 - 0.724 - - - - zinc finger protein 472 [Source:MGI Symbol;Acc:MGI:2385049]
84. Zfp142 ENSMUSG00000026135 164 0.723 - 0.723 - - - - zinc finger protein 142 [Source:MGI Symbol;Acc:MGI:1924514]
85. Aste1 ENSMUSG00000032567 469 0.723 - 0.723 - - - - asteroid homolog 1 [Source:MGI Symbol;Acc:MGI:1913845]
86. Pias3 ENSMUSG00000028101 1756 0.723 - 0.723 - - - - protein inhibitor of activated STAT 3 [Source:MGI Symbol;Acc:MGI:1913126]
87. Chmp2a ENSMUSG00000033916 1329 0.723 - 0.723 - - - - charged multivesicular body protein 2A [Source:MGI Symbol;Acc:MGI:1916203]
88. Tmem150a ENSMUSG00000055912, ENSMUSG00000102455 471 0.723 - 0.723 - - - - transmembrane protein 150A [Source:MGI Symbol;Acc:MGI:2385244]
89. Tomm6 ENSMUSG00000033475 42 0.723 - 0.723 - - - - translocase of outer mitochondrial membrane 6 [Source:MGI Symbol;Acc:MGI:1913369]
90. Col16a1 ENSMUSG00000040690 371 0.723 0.723 - - - - - collagen, type XVI, alpha 1 [Source:MGI Symbol;Acc:MGI:1095396]
91. Rpl30-ps3 ENSMUSG00000080873 111 0.723 - 0.723 - - - - ribosomal protein L30, pseudogene 3 [Source:MGI Symbol;Acc:MGI:1321401]
92. Dsp ENSMUSG00000054889 1421 0.722 - - 0.722 - - - desmoplakin [Source:MGI Symbol;Acc:MGI:109611]
93. Ahsg ENSMUSG00000022868 27 0.722 - - - - 0.722 - alpha-2-HS-glycoprotein [Source:MGI Symbol;Acc:MGI:107189]
94. Bzrap1 49 0.721 - - 0.721 - - - benzodiazepine receptor associated protein 1, transcript variant X4
95. Tmem81 ENSMUSG00000048174 69 0.721 - - - - 0.721 - transmembrane protein 81 [Source:MGI Symbol;Acc:MGI:1921876]
96. Samd15 ENSMUSG00000090812 66 0.72 - 0.720 - - - - sterile alpha motif domain containing 15 [Source:MGI Symbol;Acc:MGI:2685109]
97. Asl ENSMUSG00000025533 275 0.719 - 0.719 - - - - argininosuccinate lyase [Source:MGI Symbol;Acc:MGI:88084]
98. Ntn3 661 0.719 - - - - 0.719 - netrin 3
99. Sdc4 ENSMUSG00000017009 397 0.719 - - 0.719 - - - syndecan 4 [Source:MGI Symbol;Acc:MGI:1349164]
100. AB124611 ENSMUSG00000057191 59 0.717 - - - - 0.717 - cDNA sequence AB124611 [Source:MGI Symbol;Acc:MGI:3043001]

There are 19 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA